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Search results 301 to 400 out of 402 for Chd4

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Type Details Score
Publication
22206758 | J:182713
First Author: McDonel P
Year: 2012
Journal: Dev Biol
Title: Sin3a is essential for the genome integrity and viability of pluripotent cells.
Volume: 363
Issue: 1
Pages: 62-73
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Publication
18055048 | J:130714
First Author: Tachikawa K
Year: 2008
Journal: Neurosci Res
Title: Identification of molecules preferentially expressed beneath the marginal zone in the developing cerebral cortex.
Volume: 60
Issue: 2
Pages: 135-46
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Publication
24335282 | J:212358
First Author: Singh AP
Year: 2014
Journal: Nucleic Acids Res
Title: Analysis of the SWI/SNF chromatin-remodeling complex during early heart development and BAF250a repression cardiac gene transcription during P19 cell differentiation.
Volume: 42
Issue: 5
Pages: 2958-75
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Publication
14595844 | J:86589
First Author: McClive PJ
Year: 2003
Journal: Genesis
Title: Subtractive hybridisation screen identifies sexually dimorphic gene expression in the embryonic mouse gonad.
Volume: 37
Issue: 2
Pages: 84-90
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Publication
33795231 | J:305429
 
First Author: Kaiser M
Year: 2021
Journal: Development
Title: Regulation of otocyst patterning by Tbx2 and Tbx3 is required for inner ear morphogenesis in the mouse.
Volume: 148
Issue: 8
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Publication
21525287 | J:171421
First Author: VanDunk C
Year: 2011
Journal: J Neurosci
Title: Development, maturation, and necessity of transcription factors in the mouse suprachiasmatic nucleus.
Volume: 31
Issue: 17
Pages: 6457-67
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Publication
19796622 | J:154112
First Author: Nishiyama A
Year: 2009
Journal: Cell Stem Cell
Title: Uncovering early response of gene regulatory networks in ESCs by systematic induction of transcription factors.
Volume: 5
Issue: 4
Pages: 420-33
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Publication
- | J:58777
     
First Author: Elliott R
Year: 2000
Journal: Personal Communication
Title: Chromosome Locations Based on RH mapping
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Publication
30186101 | J:266522
 
First Author: Elsen GE
Year: 2018
Journal: Front Neurosci
Title: The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.
Volume: 12
Pages: 571
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Publication
- | J:24194
     
First Author: The Jackson Laboratory Backcross DNA Panel Mapping Resource
Year: 1999
Journal: Database Release
Title: JAX BSS Panel Mapping Data
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Publication
- | J:342607
       
First Author: Birgit Meldal and Sandra Orchard (1). (1) European Bioinformatics Institute (EBI), Hinxton, Cambridgeshire, United Kingdom
Year: 2023
Title: Manual transfer of experimentally-verified manual GO annotation data to homologous complexes by curator judgment of sequence, composition and function similarity
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Publication
22988430 | J:190636
 
First Author: Wiese CB
Year: 2012
Journal: Front Neurosci
Title: A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract.
Volume: 6
Pages: 130
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Publication
- | J:77000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: MGC Data curation in Mouse Genome Informatics
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Publication
10725249 | J:60984
First Author: Ko MS
Year: 2000
Journal: Development
Title: Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development.
Volume: 127
Issue: 8
Pages: 1737-49
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Publication
20059953 | J:156017
First Author: Yokoyama S
Year: 2009
Journal: Dev Cell
Title: A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Volume: 17
Issue: 6
Pages: 836-48
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Publication
27626380 | J:236599
First Author: Dickinson ME
Year: 2016
Journal: Nature
Title: High-throughput discovery of novel developmental phenotypes.
Volume: 537
Issue: 7621
Pages: 508-514
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Publication
- | J:72245
       
First Author: GOA curators, MGI curators
Year: 2001
Title: Gene Ontology annotation based on Enzyme Commission mapping
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Publication
12904583 | J:85162
First Author: Hansen J
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
Volume: 100
Issue: 17
Pages: 9918-22
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Publication
15618518 | J:91257
First Author: Gray PA
Year: 2004
Journal: Science
Title: Mouse brain organization revealed through direct genome-scale TF expression analysis.
Volume: 306
Issue: 5705
Pages: 2255-7
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Publication
24194600 | J:228563
First Author: Koscielny G
Year: 2014
Journal: Nucleic Acids Res
Title: The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Volume: 42
Issue: Database issue
Pages: D802-9
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Publication
12520002 | J:91812
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
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Publication
34321999 | J:313619
 
First Author: Bedogni F
Year: 2021
Journal: Front Mol Neurosci
Title: Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development.
Volume: 14
Pages: 686034
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Publication
- | J:204739
     
First Author: International Knockout Mouse Consortium
Year: 2014
Journal: Database Download
Title: MGI download of modified allele data from IKMC and creation of new knockout alleles
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Publication
- | J:57656
     
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
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Publication
- | J:136110
     
First Author: Velocigene
Year: 2008
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals)
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Publication
- | J:204812
     
First Author: International Mouse Strain Resource
Year: 2014
Journal: Database Download
Title: MGI download of germline transmission data for alleles from IMSR strain data
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Publication
- | J:155845
     
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
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Publication
- | J:171409
     
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
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Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
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Publication
- | J:155856
       
First Author: The Gene Ontology Consortium
Year: 2014
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs
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Publication
- | J:342604
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
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Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
38355793 | J:345621
First Author: Adams DJ
Year: 2024
Journal: Nature
Title: Genetic determinants of micronucleus formation in vivo.
Volume: 627
Issue: 8002
Pages: 130-136
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:60000
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Strain
MGI:6122462 | B6;129P2-Chd4<tm1.1Bh>/H
Attribute String: mutant stock, targeted mutation
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HT Experiment
GSE109012 | CHD4 and the NuRD complex directly control cardiac sarcomere formation
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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DO Term
DOID:0070529 | Sifrim-Hitz-Weiss syndrome
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HT Experiment
GSE138822 | The chromatin remodeling enzyme Chd4 regulates genome architecture in the mouse brain
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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Interaction Experiment
Ostapcuk V (2018)
Description: Activity-dependent neuroprotective protein recruits HP1 and CHD4 to control lineage-specifying genes.
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Interaction Experiment
Srinivasan R (2006)
Description: NAB2 represses transcription by interacting with the CHD4 subunit of the nucleosome remodeling and deacetylase (NuRD) complex.
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Publication
29795351 | -
First Author: Ostapcuk V
Year: 2018
Journal: Nature
Title: Activity-dependent neuroprotective protein recruits HP1 and CHD4 to control lineage-specifying genes.
Volume: 557
Issue: 7707
Pages: 739-743
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GXD Expression
GXD Expression
 
Probe: MGI:7738627
Assay Type: Immunohistochemistry
Annotation Date: 2024-10-22
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1610528
Pattern: Regionally restricted
Stage: TS28
Assay Id: MGI:7750786
Age: postnatal week 8
Note: Chd4 mutant hearts present more fibrotic cells than wild type, but these Hnf4a-expressing cells do not express the cardiomyocyte marker a-actinin.
Specimen Label: S5A Chd4 top
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:7738627
Assay Type: Immunohistochemistry
Annotation Date: 2024-10-22
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1610528
Pattern: Regionally restricted
Stage: TS28
Assay Id: MGI:7750786
Age: postnatal week 8
Note: Chd4 mutant hearts present more fibrotic cells than wild type, but these Hnf4a-expressing cells do not express the cardiomyocyte marker a-actinin.
Specimen Label: S5A Chd4 middle
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
 
Probe: MGI:7738627
Assay Type: Immunohistochemistry
Annotation Date: 2024-10-22
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1610528
Pattern: Regionally restricted
Stage: TS28
Assay Id: MGI:7750786
Age: postnatal week 8
Note: Chd4 mutant hearts present more fibrotic cells than wild type, but these Hnf4a-expressing cells do not express the cardiomyocyte marker a-actinin.
Specimen Label: S5A Chd4 bottom
Detected: true
Specimen Num: 4
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Publication
16574654 | -
First Author: Srinivasan R
Year: 2006
Journal: J Biol Chem
Title: NAB2 represses transcription by interacting with the CHD4 subunit of the nucleosome remodeling and deacetylase (NuRD) complex.
Volume: 281
Issue: 22
Pages: 15129-37
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HT Experiment
E-GEOD-70298 | The NuRD chromatin remodelling complex regulates brain cortical development
Series Id: GSE70298
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
GSE229050 | Transcriptome of E18.5 CHD4-M195I mouse hearts
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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Protein
Q8K0T3
Organism: Mus musculus/domesticus
Length: 295  
Fragment?: false
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Protein
Q3UFM8
Organism: Mus musculus/domesticus
Length: 240  
Fragment?: false
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Protein
A0A5F8MQ82
Organism: Mus musculus/domesticus
Length: 385  
Fragment?: true
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Protein
Q3ULG0
Organism: Mus musculus/domesticus
Length: 342  
Fragment?: true
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Protein Domain
IPR012958 | CHD_N
Type: Domain
Description: This entry represents the N-terminal domain of CHD (Chromodomain, Helicase, DNA-binding) proteins. CHD3 and CHD4 belong to the class II subfamily of CHD ATPases, and each is present as a core catalytic subunit in separate NuRD complexes, which regulate chromatin organisation and gene transcription []. CHD5 forms a NuRD-type chromatin remodeling complex and acts as a tumour suppressor []. There are nine members of the Chromodomain, Helicase, DNA-binding (CHD) family. They are characterised by two chromodomains arranged in tandem, N-terminal to the ATPase/helicase domain. Chromodomains are comprised of a β-sheet folded against an α-helix that collectively mediates binding to methyl-lysine residues [].
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Protein Domain
IPR012957 | CHD_C2
Type: Domain
Description: This entry represents the C-terminal domain of CHD (Chromodomain, Helicase, DNA-binding) proteins. CHD3 and CHD4 belong to the class II subfamily of CHD ATPases, and each is present as a core catalytic subunit in separate NuRD complexes, which regulate chromatin organisation and gene transcription []. CHD5 forms a NuRD-type chromatin remodeling complex and acts as a tumour suppressor []. There are nine members of the Chromodomain, Helicase, DNA-binding (CHD) family. They are characterised by two chromodomains arranged in tandem, N-terminal to the ATPase/helicase domain. Chromodomains are comprised of a β-sheet folded against an α-helix that collectively mediates binding to methyl-lysine residues [].
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Publication
23340908 | -
First Author: Allen HF
Year: 2013
Journal: Cell Mol Life Sci
Title: The NuRD architecture.
Volume: 70
Issue: 19
Pages: 3513-24
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Publication
24419087 | -
First Author: Kolla V
Year: 2014
Journal: Cancer Res
Title: Role of CHD5 in human cancers: 10 years later.
Volume: 74
Issue: 3
Pages: 652-8
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Publication
23954449 | -
First Author: Stanley FK
Year: 2013
Journal: Mutat Res
Title: CHD chromatin remodelling enzymes and the DNA damage response.
Volume: 750
Issue: 1-2
Pages: 31-44
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Publication
33859416 | J:308797
First Author: Vinjamur DS
Year: 2021
Journal: Nat Genet
Title: ZNF410 represses fetal globin by singular control of CHD4.
Volume: 53
Issue: 5
Pages: 719-728
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Publication
25453762 | J:219298
First Author: Kim JY
Year: 2014
Journal: Mol Cell
Title: Specificity in circadian clock feedback from targeted reconstitution of the NuRD corepressor.
Volume: 56
Issue: 6
Pages: 738-48
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Publication
37285842 | J:337870
First Author: Ferreira ACF
Year: 2023
Journal: Immunity
Title: Neuroprotective protein ADNP-dependent histone remodeling complex promotes T helper 2 immune cell differentiation.
Volume: 56
Issue: 7
Pages: 1468-1484.e7
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Publication
22531782 | J:184808
First Author: Luijsterburg MS
Year: 2012
Journal: EMBO J
Title: A new non-catalytic role for ubiquitin ligase RNF8 in unfolding higher-order chromatin structure.
Volume: 31
Issue: 11
Pages: 2511-27
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Protein
Q4QQN1
Organism: Mus musculus/domesticus
Length: 368  
Fragment?: false
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Publication
9804427 | J:175129
First Author: Tong JK
Year: 1998
Journal: Nature
Title: Chromatin deacetylation by an ATP-dependent nucleosome remodelling complex.
Volume: 395
Issue: 6705
Pages: 917-21
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Publication
24849318 | J:216320
First Author: Bergs JW
Year: 2014
Journal: PLoS One
Title: Differential expression and sex chromosome association of CHD3/4 and CHD5 during spermatogenesis.
Volume: 9
Issue: 5
Pages: e98203
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Publication
25753662 | J:231640
First Author: Desai MA
Year: 2015
Journal: Nucleic Acids Res
Title: An intrinsically disordered region of methyl-CpG binding domain protein 2 (MBD2) recruits the histone deacetylase core of the NuRD complex.
Volume: 43
Issue: 6
Pages: 3100-13
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Publication
35150568 | J:323014
First Author: Chrysanthou S
Year: 2022
Journal: Nucleic Acids Res
Title: The DNA dioxygenase Tet1 regulates H3K27 modification and embryonic stem cell biology independent of its catalytic activity.
Volume: 50
Issue: 6
Pages: 3169-3189
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Protein
Q9CUI4
Organism: Mus musculus/domesticus
Length: 256  
Fragment?: true
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Protein
A2A8L1
Organism: Mus musculus/domesticus
Length: 1946  
Fragment?: false
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Protein
Q6PDQ2
Organism: Mus musculus/domesticus
Length: 1915  
Fragment?: false
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Protein
Q5DTP7
Organism: Mus musculus/domesticus
Length: 1945  
Fragment?: true
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Protein
E9Q614
Organism: Mus musculus/domesticus
Length: 2021  
Fragment?: false
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Protein
F7C528
Organism: Mus musculus/domesticus
Length: 1886  
Fragment?: true
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Protein
E9PYU4
Organism: Mus musculus/domesticus
Length: 1915  
Fragment?: false
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Protein
E9PYL1
Organism: Mus musculus/domesticus
Length: 1952  
Fragment?: false
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Protein
B1AR17
Organism: Mus musculus/domesticus
Length: 2055  
Fragment?: false
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Protein
E9QAS4
Organism: Mus musculus/domesticus
Length: 1902  
Fragment?: false
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Protein
E9QAS5
Organism: Mus musculus/domesticus
Length: 1922  
Fragment?: false
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