Type |
Details |
Score |
Publication |
First Author: |
Billingsley CN |
Year: |
2013 |
Journal: |
Am J Med Genet A |
Title: |
Non-trisomic homeobox gene expression during craniofacial development in the Ts65Dn mouse model of Down syndrome. |
Volume: |
161A |
Issue: |
8 |
Pages: |
1866-74 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ebeid M |
Year: |
2022 |
Journal: |
Dev Dyn |
Title: |
PRDM16 expression and function in mammalian cochlear development. |
Volume: |
251 |
Issue: |
10 |
Pages: |
1666-1683 |
|
•
•
•
•
•
|
Publication |
First Author: |
Decourtye L |
Year: |
2022 |
Journal: |
Differentiation |
Title: |
Characterization of a novel Lbx1 mouse loss of function strain. |
Volume: |
123 |
|
Pages: |
30-41 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sherwood RI |
Year: |
2007 |
Journal: |
Dev Biol |
Title: |
Prospective isolation and global gene expression analysis of definitive and visceral endoderm. |
Volume: |
304 |
Issue: |
2 |
Pages: |
541-55 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gitton Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
A gene expression map of human chromosome 21 orthologues in the mouse. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
586-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
Reymond A |
Year: |
2002 |
Journal: |
Nature |
Title: |
Human chromosome 21 gene expression atlas in the mouse. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
582-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Thiagarajan RD |
Year: |
2011 |
Journal: |
PLoS One |
Title: |
Identification of anchor genes during kidney development defines ontological relationships, molecular subcompartments and regulatory pathways. |
Volume: |
6 |
Issue: |
2 |
Pages: |
e17286 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information Editorial Staff Collaboration |
Year: |
2001 |
|
Title: |
LocusLink Collaboration |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
MGI and IMPC |
Year: |
2018 |
Journal: |
Database Release |
Title: |
MGI Load of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2016 |
|
Title: |
Automatic assignment of GO terms using logical inference, based on on inter-ontology links |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Velocigene |
Year: |
2008 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals) |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
International Mouse Strain Resource |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of germline transmission data for alleles from IMSR strain data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Wellcome Trust Sanger Institute |
Year: |
2009 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute |
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|
|
•
•
•
•
•
|
Publication |
First Author: |
GUDMAP Consortium |
Year: |
2004 |
Journal: |
www.gudmap.org |
Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
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|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
Year: |
2014 |
Journal: |
Database Release |
Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2014 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Magdaleno S |
Year: |
2006 |
Journal: |
PLoS Biol |
Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
Volume: |
4 |
Issue: |
4 |
Pages: |
e86 |
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Skarnes WC |
Year: |
2011 |
Journal: |
Nature |
Title: |
A conditional knockout resource for the genome-wide study of mouse gene function. |
Volume: |
474 |
Issue: |
7351 |
Pages: |
337-42 |
|
•
•
•
•
•
|
Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
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•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
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|
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•
•
•
•
•
|
Allele |
Name: |
transgene insertion HR247, GENSAT Project at Rockefeller University |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Strain |
Attribute String: |
mutant stock, transgenic |
|
•
•
•
•
•
|
Publication |
First Author: |
Friedli M |
Year: |
2003 |
Journal: |
Gene |
Title: |
Identification of a novel member of the CLIC family, CLIC6, mapping to 21q22.12. |
Volume: |
320 |
|
Pages: |
31-40 |
|
•
•
•
•
•
|
Publication |
First Author: |
Fernández-Salas E |
Year: |
1999 |
Journal: |
J Biol Chem |
Title: |
p53 and tumor necrosis factor alpha regulate the expression of a mitochondrial chloride channel protein. |
Volume: |
274 |
Issue: |
51 |
Pages: |
36488-97 |
|
•
•
•
•
•
|
Publication |
First Author: |
Duncan RR |
Year: |
1997 |
Journal: |
J Biol Chem |
Title: |
Rat brain p64H1, expression of a new member of the p64 chloride channel protein family in endoplasmic reticulum. |
Volume: |
272 |
Issue: |
38 |
Pages: |
23880-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shiio Y |
Year: |
2006 |
Journal: |
J Biol Chem |
Title: |
Quantitative proteomic analysis of myc-induced apoptosis: a direct role for Myc induction of the mitochondrial chloride ion channel, mtCLIC/CLIC4. |
Volume: |
281 |
Issue: |
5 |
Pages: |
2750-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Suh KS |
Year: |
2004 |
Journal: |
J Biol Chem |
Title: |
The organellular chloride channel protein CLIC4/mtCLIC translocates to the nucleus in response to cellular stress and accelerates apoptosis. |
Volume: |
279 |
Issue: |
6 |
Pages: |
4632-41 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry represents chloride intracellular channel 4 and 6.Like several other chloride intracellular channel (CLIC) proteins, CLIC4 is dimorphic and can exist in soluble form or as a membrane channel. It has a transmembrane domain and is found in intracellular membranes including inner mitochondrial membrane, trans Golgi network and the endoplasmic reticulum. It has putative chloride ion selective channel activity []. Soluble CLIC4 is abundant in the cytoplasm and can translocate to the nucleus under conditions of metabolic stress, apoptosis and DNA damage []. CLIC4 is upregulated in response to p53 transcriptional activity and is essential for p53 and c-Myc mediated apoptosis [, ].CLIC6 is a member of the chloride intracellular channel (CLIC) protein family, though no chloride channel activity has been shown for it yet. CLIC6 is significantly longer than the other other members of the CLIC family []. It interacts with dopamine D(2)-like receptors []. |
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•
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
68
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
100
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
596
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
253
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
253
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Expression Nervous System Atlas (GENSAT) Project, The Rockefeller University (New York, NY) |
Year: |
2005 |
Journal: |
Database Download |
Title: |
MGI download of GENSAT transgene data |
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•
•
•
•
•
|