Type |
Details |
Score |
Allele |
Name: |
fumarylacetoacetate hydrolase; endonuclease-mediated mutation 1, Michael Wiles |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
Allele |
Name: |
tyrosinase; albino deletion 26DVT, Oak Ridge |
Allele Type: |
Radiation induced |
|
|
•
•
•
•
•
|
Allele |
Name: |
a disintegrin and metallopeptidase domain 22; endonuclease-mediated mutation 1, Masaki Fukata |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Epitope tag, Modified isoform(s) |
|
•
•
•
•
•
|
Allele |
Name: |
hepatocyte specific developmental regulation 1 |
Allele Type: |
Radiation induced |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Johnson DK |
Year: |
1989 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Molecular mapping within the mouse albino-deletion complex. |
Volume: |
86 |
Issue: |
22 |
Pages: |
8862-6 |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tyr/Tyr |
Background: |
involves: 101/Rl * C3H/Rl * T-stock |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tyr/Tyr<+> |
Background: |
involves: 101/Rl * C3H/Rl * T-stock |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Holdener BC |
Year: |
1994 |
Journal: |
Bioessays |
Title: |
A mouse model for human hereditary tyrosinemia I. |
Volume: |
16 |
Issue: |
2 |
Pages: |
85-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gluecksohn-Waelsch S |
Year: |
1979 |
Journal: |
Cell |
Title: |
Genetic control of morphogenetic and biochemical differentiation: lethal albino deletions in the mouse. |
Volume: |
16 |
Issue: |
2 |
Pages: |
225-37 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gluecksohn-Waelsch S |
Year: |
1989 |
Journal: |
Mouse News Lett |
Title: |
Research News: the precise timing of hormone inducibility of liver specifice structural genes |
Volume: |
83 |
|
Pages: |
149 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhi T |
Year: |
2016 |
Journal: |
Planta |
Title: |
Sugar suppresses cell death caused by disruption of fumarylacetoacetate hydrolase in Arabidopsis. |
Volume: |
244 |
Issue: |
3 |
Pages: |
557-71 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Homologous_superfamily |
Description: |
Fumarylacetoacetase (; also known as fumarylacetoacetate hydrolase or FAH) catalyses the hydrolytic cleavage of a carbon-carbon bond in fumarylacetoacetate to yield fumarate and acetoacetate as the final step in phenylalanine and tyrosine degradation []. This is an essential metabolic function in humans, the lack of FAH causing type I tyrosinaemia, which is associated with liver and kidney abnormalities and neurological disorders [, ]. The enzyme mechanism involves a catalytic metal ion, a Glu/His catalytic dyad, and a charged oxyanion hole []. FAH folds into two domains: anN-terminal domain SH3-like β-barrel, and a C-terminal with an unusual fold consisting of three layers of β-sheet structures [].This entry represents the N-terminal domain superfamily of fumarylacetoacetase. This domain adopts a structure consisting of an SH3-like barrel []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Fumarylacetoacetase (; also known as fumarylacetoacetate hydrolase or FAH) catalyses the hydrolytic cleavage of a carbon-carbon bond in fumarylacetoacetate to yield fumarate and acetoacetate as the final step in phenylalanine and tyrosine degradation [, ]. This is an essential metabolic function in humans, the lack of FAH causing type I tyrosinemia, which is associated with liver and kidney abnormalities and neurological disorders [, ]. The enzyme mechanism involves a catalytic metal ion, a Glu/His catalytic dyad, and a charged oxyanion hole []. FAH folds into two domains: an N-terminal domain SH3-like β-barrel, and a C-terminal with an unusual fold consisting of three layers of β-sheet structures [].In Aspergillus fumigatus, this enzyme is part of the L-tyrosine degradation gene cluster that mediates the biosynthesis of the brownish pigment pyomelanin as an alternative melanin [, ]. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
Fumarylacetoacetase (; also known as fumarylacetoacetate hydrolase or FAH) catalyses the hydrolytic cleavage of a carbon-carbon bond in fumarylacetoacetate to yield fumarate and acetoacetate as the final step in phenylalanine and tyrosine degradation []. This is an essential metabolic function in humans, the lack of FAH causing type I tyrosinaemia, which is associated with liver and kidney abnormalities and neurological disorders [, ]. The enzyme mechanism involves a catalytic metal ion, a Glu/His catalytic dyad, and a charged oxyanion hole []. FAH folds into two domains: an N-terminal domain SH3-like β-barrel, and a C-terminal with an unusual fold consisting of three layers of β-sheet structures [].This entry represents the N-terminal domain of fumarylacetoacetase. This domain adopts a structure consisting of an SH3-like barrel []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Timm DE |
Year: |
1999 |
Journal: |
Structure |
Title: |
Crystal structure and mechanism of a carbon-carbon bond hydrolase. |
Volume: |
7 |
Issue: |
9 |
Pages: |
1023-33 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bateman RL |
Year: |
2001 |
Journal: |
J Biol Chem |
Title: |
Mechanistic inferences from the crystal structure of fumarylacetoacetate hydrolase with a bound phosphorus-based inhibitor. |
Volume: |
276 |
Issue: |
18 |
Pages: |
15284-91 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
419
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Scott CR |
Year: |
2006 |
Journal: |
Am J Med Genet C Semin Med Genet |
Title: |
The genetic tyrosinemias. |
Volume: |
142C |
Issue: |
2 |
Pages: |
121-6 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Homologous_superfamily |
Description: |
Fumarylacetoacetase (; also known as fumarylacetoacetate hydrolase or FAH) catalyses the hydrolytic cleavage of a carbon-carbon bond in fumarylacetoacetate to yield fumarate and acetoacetate as the final step in phenylalanine and tyrosine degradation []. This is an essential metabolic function in humans, the lack of FAH causing type I tyrosinaemia, which is associated with liver and kidney abnormalities and neurological disorders [, ]. The enzyme mechanism involves a catalytic metal ion, a Glu/His catalytic dyad, and a charged oxyanion hole []. FAH folds into two domains: an N-terminal domain SH3-like β-barrel, and a C-terminal with an unusual fold consisting of three layers of β-sheet structures [].This superfamily represents the C-terminal domain of fumarylacetoacetase, as well as other domains that share a homologous α/β structure, including:5-carboxymethyl-2-hydroxymuconate delta-isomerase (CHM isomerase; ), which catalyses the conversion of 5-carboxymethyl-2-hydroxymuconate to 5-carboxy-2-oxohept-3-enedioate [].5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (OPET decarboxylase; ),which catalyses the conversion of 5-oxopent-3-ene-1,2,5-tricarboxylate to 2-oxohept-3-enedioate and carbon dioxide.Bifunctional enzyme HpcE (OPET decarboxylase /HHDD isomerase ), which is a duplication consisting of a tandem repeat of two FAH C-terminal-like domains. This enzyme is responsible for the degradation of 4-hydroxyphenylacetate, a product of tyrosine and phenylalanine metabolism also released by lignin catabolism []. 2-keto-4-pentenoate hydratase MhpD (; also known as 2-oxopent-4-enoate hydratase), which converts 4-hydroxy-2-oxopentanoate to 2-oxopent-4-enoate [].4-oxalocrotonate decarboxylase (4-OD; ), which catalyses the conversion of 4-oxalocrotonate to 2-oxopent-4-enoate and carbon dioxide [].2-oxo-hepta-3-ene-1,7-dioic acid hydratase, which hydrates the double bond of 2-oxo-hepta-3-ene-1,7-dioic acid to form 4-hydroxy-2-oxo-heptane-1,7-dioic acid in the catabolism of 4-hydroxyphenylacetic acid. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
Fumarylacetoacetase (; also known as fumarylacetoacetate hydrolase or FAH) catalyses the hydrolytic cleavage of a carbon-carbon bond in fumarylacetoacetate to yield fumarate and acetoacetate as the final step in phenylalanine and tyrosine degradation []. This is an essential metabolic function in humans, the lack of FAH causing type I tyrosinaemia, which is associated with liver and kidney abnormalities and neurological disorders [, ]. The enzyme mechanism involves a catalytic metal ion, a Glu/His catalytic dyad, and a charged oxyanion hole []. FAH folds into two domains: an N-terminal domain SH3-like β-barrel, and a C-terminal with an unusual fold consisting of three layers of β-sheet structures [].This entry represents the C-terminal domain of fumarylacetoacetase, as well as other domains that share a homologous α/β structure, including:5-carboxymethyl-2-hydroxymuconate delta-isomerase (CHM isomerase; ), which catalyses the conversion of 5-carboxymethyl-2-hydroxymuconate to 5-carboxy-2-oxohept-3-enedioate [].5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (OPET decarboxylase; ), which catalyses the conversion of 5-oxopent-3-ene-1,2,5-tricarboxylate to 2-oxohept-3-enedioate and carbon dioxide.Bifunctional enzyme HpcE (OPET decarboxylase /HHDD isomerase ), whichis a duplication consisting of a tandem repeat of two FAH C-terminal-like domains. This enzyme is responsible for the degradation of 4-hydroxyphenylacetate, a product of tyrosine and phenylalanine metabolism also released by lignin catabolism []. 2-keto-4-pentenoate hydratase MhpD (; also known as 2-oxopent-4-enoate hydratase), which converts 4-hydroxy-2-oxopentanoate to 2-oxopent-4-enoate [].4-oxalocrotonate decarboxylase (4-OD; ), which catalyses the conversion of 4-oxalocrotonate to 2-oxopent-4-enoate and carbon dioxide [].2-oxo-hepta-3-ene-1,7-dioic acid hydratase, which hydrates the double bond of 2-oxo-hepta-3-ene-1,7-dioic acid to form 4-hydroxy-2-oxo-heptane-1,7-dioic acid in the catabolism of 4-hydroxyphenylacetic acid. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
141
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
313
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
227
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
313
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Roper DI |
Year: |
1990 |
Journal: |
FEBS Lett |
Title: |
Purification, some properties and nucleotide sequence of 5-carboxymethyl-2-hydroxymuconate isomerase of Escherichia coli C. |
Volume: |
266 |
Issue: |
1-2 |
Pages: |
63-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tame JR |
Year: |
2002 |
Journal: |
Biochemistry |
Title: |
The crystal structure of HpcE, a bifunctional decarboxylase/isomerase with a multifunctional fold. |
Volume: |
41 |
Issue: |
9 |
Pages: |
2982-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Arai H |
Year: |
1999 |
Journal: |
Microbiology |
Title: |
Genetic organization and characteristics of the 3-(3-hydroxyphenyl)propionic acid degradation pathway of Comamonas testosteroni TA441. |
Volume: |
145 ( Pt 10) |
|
Pages: |
2813-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Stanley TM |
Year: |
2000 |
Journal: |
Biochemistry |
Title: |
Expression and stereochemical and isotope effect studies of active 4-oxalocrotonate decarboxylase. |
Volume: |
39 |
Issue: |
4 |
Pages: |
718-26 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tönjes RR |
Year: |
1991 |
Journal: |
Genomics |
Title: |
Microclones derived from the mouse chromosome 7 D-E bands map within the proximal region of the c14CoS deletion in albino mutant mice. |
Volume: |
10 |
Issue: |
3 |
Pages: |
686-91 |
|
•
•
•
•
•
|
Strain |
Attribute String: |
congenic, endonuclease-mediated mutation, mutant strain, targeted mutation |
|
•
•
•
•
•
|
Publication |
First Author: |
Fukata Y |
Year: |
2021 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
LGI1-ADAM22-MAGUK configures transsynaptic nanoalignment for synaptic transmission and epilepsy prevention. |
Volume: |
118 |
Issue: |
3 |
|
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tenm4/Tenm4<+> Tyr/Tyr<+> |
Background: |
involves: 101/Rl * BALB/cRl * C3H/Rl * C57BL/10Rl * T-stock |
Zygosity: |
cx |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tyr/Tyr |
Background: |
involves: 101/Rl * C3H/Rl * T-stock |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Schmaler-Ripcke J |
Year: |
2009 |
Journal: |
Appl Environ Microbiol |
Title: |
Production of pyomelanin, a second type of melanin, via the tyrosine degradation pathway in Aspergillus fumigatus. |
Volume: |
75 |
Issue: |
2 |
Pages: |
493-503 |
|
•
•
•
•
•
|
Publication |
First Author: |
Keller S |
Year: |
2011 |
Journal: |
PLoS One |
Title: |
Pyomelanin formation in Aspergillus fumigatus requires HmgX and the transcriptional activator HmgR but is dispensable for virulence. |
Volume: |
6 |
Issue: |
10 |
Pages: |
e26604 |
|
•
•
•
•
•
|
Publication |
First Author: |
Rinchik EM |
Year: |
1993 |
Journal: |
Genetics |
Title: |
Molecular analysis of radiation-induced albino (c)-locus mutations that cause death at preimplantation stages of development. |
Volume: |
135 |
Issue: |
4 |
Pages: |
1107-16 |
|
•
•
•
•
•
|
Publication |
First Author: |
Potter MD |
Year: |
1993 |
Journal: |
Mamm Genome |
Title: |
Deletion mapping of the chocolate (cht) locus within the Fes-Hbb region of mouse chromosome 7. |
Volume: |
4 |
Issue: |
1 |
Pages: |
46-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Rikke BA |
Year: |
1997 |
Journal: |
Genetics |
Title: |
Murine albino-deletion complex: high-resolution microsatellite map and genetically anchored YAC framework map. |
Volume: |
147 |
Issue: |
2 |
Pages: |
787-99 |
|
•
•
•
•
•
|
Publication |
First Author: |
Russell LB |
Year: |
1979 |
Journal: |
Genetics |
Title: |
Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. |
Volume: |
92 |
Issue: |
1 |
Pages: |
205-13 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pircher H |
Year: |
2011 |
Journal: |
J Biol Chem |
Title: |
Identification of human fumarylacetoacetate hydrolase domain-containing protein 1 (FAHD1) as a novel mitochondrial acylpyruvase. |
Volume: |
286 |
Issue: |
42 |
Pages: |
36500-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kubo S |
Year: |
1998 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Hepatocyte injury in tyrosinemia type 1 is induced by fumarylacetoacetate and is inhibited by caspase inhibitors. |
Volume: |
95 |
Issue: |
16 |
Pages: |
9552-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Rinchik EM |
Year: |
1993 |
Journal: |
Genetics |
Title: |
Deletion mapping of four loci defined by N-ethyl-N-nitrosourea-induced postimplantation-lethal mutations within the pid-Hbb region of mouse chromosome 7. |
Volume: |
135 |
Issue: |
4 |
Pages: |
1117-23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Russell LB |
Year: |
1982 |
Journal: |
Genetics |
Title: |
Analysis of the albino-locus region of the mouse: IV. Characterization of 34 deficiencies. |
Volume: |
100 |
Issue: |
3 |
Pages: |
427-53 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mathieu PA |
Year: |
2001 |
Journal: |
Eur J Immunol |
Title: |
Identification of two liver proteins recognized by autoantibodies elicited in mice infected with mouse hepatitis virus A59. |
Volume: |
31 |
Issue: |
5 |
Pages: |
1447-55 |
|
•
•
•
•
•
|
Publication |
First Author: |
Phaneuf D |
Year: |
1991 |
Journal: |
Am J Hum Genet |
Title: |
Cloning and expression of the cDNA encoding human fumarylacetoacetate hydrolase, the enzyme deficient in hereditary tyrosinemia: assignment of the gene to chromosome 15. |
Volume: |
48 |
Issue: |
3 |
Pages: |
525-35 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wentz SC |
Year: |
2008 |
Journal: |
J Gastrointest Surg |
Title: |
Targeting MEK is effective chemoprevention of hepatocellular carcinoma in TGF-alpha-transgenic mice. |
Volume: |
12 |
Issue: |
1 |
Pages: |
30-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang S |
Year: |
2022 |
Journal: |
Front Cell Dev Biol |
Title: |
The cell cycle inhibitor RB is diluted in G1 and contributes to controlling cell size in the mouse liver. |
Volume: |
10 |
|
Pages: |
965595 |
|
•
•
•
•
•
|
Publication |
First Author: |
Rinchik EM |
Year: |
1990 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
A strategy for fine-structure functional analysis of a 6- to 11-centimorgan region of mouse chromosome 7 by high-efficiency mutagenesis. |
Volume: |
87 |
Issue: |
3 |
Pages: |
896-900 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kelsey G |
Year: |
1992 |
Journal: |
Genomics |
Title: |
Physical mapping of the albino-deletion complex in the mouse to localize alf/hsdr-1, a locus required for neonatal survival. |
Volume: |
14 |
Issue: |
2 |
Pages: |
275-87 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gluecksohn-Waelsch S |
Year: |
1974 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Complementation studies of lethal alleles in the mouse causing deficiencies of glucose-6-phosphatase, tyrosine aminotransferase, and serine dehydratase. |
Volume: |
71 |
Issue: |
3 |
Pages: |
825-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lossie AC |
Year: |
2005 |
Journal: |
Genetics |
Title: |
Mutation of l7Rn3 shows that Odz4 is required for mouse gastrulation. |
Volume: |
169 |
Issue: |
1 |
Pages: |
285-99 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yokoi N |
Year: |
2021 |
Journal: |
Cell Rep |
Title: |
14-3-3 proteins stabilize LGI1-ADAM22 levels to regulate seizure thresholds in mice. |
Volume: |
37 |
Issue: |
11 |
Pages: |
110107 |
|
•
•
•
•
•
|
Publication |
First Author: |
Oak Ridge National Laboratory |
Year: |
2005 |
Journal: |
Unpublished |
Title: |
Information obtained from the Oak Ridge National Laboratory Mutant Mouse Database (ORNL), Oak Ridge, TN |
|
|
|
|
•
•
•
•
•
|