Type |
Details |
Score |
Genotype |
Symbol: |
Fto/Fto Tg(Nes-cre)1Kln/? |
Background: |
involves: 129P2/OlaHsd * 129S4/SvJaeSor * C57BL/6 * SJL |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Fto/Fto Lep/Lep |
Background: |
involves: 129S1/Sv * 129X1/SvJ * C57BL/6J |
Zygosity: |
cx |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Fto/Fto |
Background: |
B6JTyr;B6N-Fto/Wtsi |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Fto/Fto Tg(Adipoq-cre)1Evdr/? |
Background: |
involves: C57BL/6N * FVB/NJ |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Fto/Fto |
Background: |
involves: C57BL/6N |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Toh JDW |
Year: |
2015 |
Journal: |
Chem Sci |
Title: |
A strategy based on nucleotide specificity leads to a subfamily-selective and cell-active inhibitor of N6-methyladenosine demethylase FTO. |
Volume: |
6 |
Issue: |
1 |
Pages: |
112-122 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Homologous_superfamily |
Description: |
FTO contains two well-defined domains: an N- (residues 32-326) and a C- (residues 327-498) terminal domain. The N-terminal domain of this protein is a DNA demethylase []. This entry represents the C-terminal domain (CTD). This domain is α-helical with α7, α8 and α10 forming a three-helix bundle. One end of the helix bundle interacts with the N-terminal domain of FTO, and it has been suggested that the CTD plays a role in stabilising the NTD's conformation since the NTD only exhibits enzymatic activity when co-expressed with the CTD [].Alpha-ketoglutarate-dependent dioxygenase FTO, also known as Fat mass and obesity-associated protein, is a nucleus protein which belongs to the FTO family. This enzyme is a dioxygenase that repairs alkylated DNA and RNA by oxidative demethylation []. FTO activity is highest towards single-stranded RNA containing 3-methyluracil, followed by single-stranded DNA containing 3-methylthymine. FTO has low demethylase activity towards single-stranded DNA containing 1-methyladenine or 3-methylcytosine [], ]. FTO has no activity towards 1-methylguanine. It has no detectable activity towards double-stranded DNA. FTO requires molecular oxygen, alpha-ketoglutarate and iron. FTO contributes to the regulation of the global metabolic rate, energy expenditure and energy homeostasis. It contributes to the regulation of body size and body fat accumulation as well []. |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Fto/Fto Ndor1/? |
Background: |
involves: 129S/SvEv * 129S1/Sv * 129X1/SvJ * C57BL/6 * SJL |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
Alpha-ketoglutarate-dependent dioxygenase FTO, also known as Fat mass and obesity-associated protein, is a nucleus protein which belongs to the FTO family. This enzyme is a dioxygenase that repairs alkylated DNA and RNA by oxidative demethylation []. FTO activity is highest towards single-stranded RNA containing 3-methyluracil, followed by single-stranded DNA containing 3-methylthymine. FTO has low demethylase activity towards single-stranded DNA containing 1-methyladenine or 3-methylcytosine [], ]. FTO has no activity towards 1-methylguanine. It has no detectable activity towards double-stranded DNA. FTO requires molecular oxygen, alpha-ketoglutarate and iron. FTO contributes to the regulation of the global metabolic rate, energy expenditure and energy homeostasis. It contributes to the regulation of body size and body fat accumulation as well [].FTO contains two well-defined domains: an N- (residues 32-326) and a C- (residues 327-498) terminal domain. The N-terminal domain of this protein is a DNA demethylase []. This entry represents the C-terminal domain (CTD). This domain is α-helical with α7, α8 and α10 forming a three-helix bundle. One end of the helix bundle interacts with the N-terminal domain of FTO, and it has been suggested that the CTD plays a role in stabilising the NTD's conformation since the NTD only exhibits enzymatic activity when co-expressed with the CTD []. |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Emx1/Emx1<+> Fto/Fto |
Background: |
involves: 129S2/SvPas * C57BL/6J |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Allele |
Name: |
gene trap ROSA 26, Philippe Soriano; targeted mutation 1.1, Roger D Cox |
Allele Type: |
Targeted |
Attribute String: |
Inserted expressed sequence, Reporter |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> |
Background: |
involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * SJL |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Gt(ROSA)26Sor/Gt(ROSA)26Sor |
Background: |
involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * SJL |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
RNA-Seq |
Study Type: |
WT vs. Mutant |
Source: |
GEO |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Fto/Fto Speer6-ps1/Speer6-ps1<+> |
Background: |
involves: C57BL/6 |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Lee DH |
Year: |
2005 |
Journal: |
J Biol Chem |
Title: |
Repair of methylation damage in DNA and RNA by mammalian AlkB homologues. |
Volume: |
280 |
Issue: |
47 |
Pages: |
39448-59 |
|
•
•
•
•
•
|
Publication |
First Author: |
Solberg A |
Year: |
2013 |
Journal: |
J Mol Cell Biol |
Title: |
Deletion of mouse Alkbh7 leads to obesity. |
Volume: |
5 |
Issue: |
3 |
Pages: |
194-203 |
|
•
•
•
•
•
|
Publication |
First Author: |
Fu D |
Year: |
2013 |
Journal: |
Genes Dev |
Title: |
Human ALKBH7 is required for alkylation and oxidation-induced programmed necrosis. |
Volume: |
27 |
Issue: |
10 |
Pages: |
1089-100 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang G |
Year: |
2014 |
Journal: |
J Biol Chem |
Title: |
The atomic resolution structure of human AlkB homolog 7 (ALKBH7), a key protein for programmed necrosis and fat metabolism. |
Volume: |
289 |
Issue: |
40 |
Pages: |
27924-36 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Nine mammalian AlkB homologues exist, ALKBH1-8 and FTO [, ]. Differently to other AlkB homologues, AlkB homologue 7 (ALKBH7) does not exhibit any demethylase activity in DNA or RNA []and its substrate is still unknown []. ALKBH7 is located in the mitochondrial matrix. It is a key protein for programmed necrosis and fat metabolism [, , ]. After agent-induced DNA-damage, it triggers the collapse of mitochondrial membrane potential and large-scale loss of mitochondrial function that lead to energy depletion and cellular demise []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Qiao Y |
Year: |
2024 |
Journal: |
iScience |
Title: |
The role of m6A modification in the risk prediction and Notch1 pathway of Alzheimer's disease. |
Volume: |
27 |
Issue: |
7 |
Pages: |
110235 |
|
•
•
•
•
•
|
Publication |
First Author: |
Du J |
Year: |
2020 |
Journal: |
Dev Cell |
Title: |
N6-Adenosine Methylation of Socs1 mRNA Is Required to Sustain the Negative Feedback Control of Macrophage Activation. |
Volume: |
55 |
Issue: |
6 |
Pages: |
737-753.e7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Song T |
Year: |
2019 |
Journal: |
Nucleic Acids Res |
Title: |
Zfp217 mediates m6A mRNA methylation to orchestrate transcriptional and post-transcriptional regulation to promote adipogenic differentiation. |
Volume: |
47 |
Issue: |
12 |
Pages: |
6130-6144 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sobreira DR |
Year: |
2021 |
Journal: |
Science |
Title: |
Extensive pleiotropism and allelic heterogeneity mediate metabolic effects of IRX3 and IRX5. |
Volume: |
372 |
Issue: |
6546 |
Pages: |
1085-1091 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
221
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Anselme I |
Year: |
2007 |
Journal: |
Dev Biol |
Title: |
Defects in brain patterning and head morphogenesis in the mouse mutant Fused toes. |
Volume: |
304 |
Issue: |
1 |
Pages: |
208-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bjune JI |
Year: |
2019 |
Journal: |
Int J Obes (Lond) |
Title: |
IRX5 regulates adipocyte amyloid precursor protein and mitochondrial respiration in obesity. |
Volume: |
43 |
Issue: |
11 |
Pages: |
2151-2162 |
|
•
•
•
•
•
|
Publication |
First Author: |
Carli JFM |
Year: |
2018 |
Journal: |
FASEB J |
Title: |
The role of Rpgrip1l, a component of the primary cilium, in adipocyte development and function. |
Volume: |
32 |
Issue: |
7 |
Pages: |
3946-3956 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lin L |
Year: |
2014 |
Journal: |
Hum Mol Genet |
Title: |
Fat mass and obesity-associated (FTO) protein interacts with CaMKII and modulates the activity of CREB signaling pathway. |
Volume: |
23 |
Issue: |
12 |
Pages: |
3299-306 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zillikens MC |
Year: |
2017 |
Journal: |
Nat Commun |
Title: |
Large meta-analysis of genome-wide association studies identifies five loci for lean body mass. |
Volume: |
8 |
Issue: |
1 |
Pages: |
80 |
|
•
•
•
•
•
|
Publication |
First Author: |
Faulds KJ |
Year: |
2018 |
Journal: |
J Biol Chem |
Title: |
Glycogen synthase kinase-3 (GSK-3) activity regulates mRNA methylation in mouse embryonic stem cells. |
Volume: |
293 |
Issue: |
27 |
Pages: |
10731-10743 |
|
•
•
•
•
•
|
Publication |
First Author: |
Son JE |
Year: |
2022 |
Journal: |
Int J Obes (Lond) |
Title: |
Deficiency of Irx5 protects mice from obesity and associated metabolic abnormalities. |
Volume: |
46 |
Issue: |
11 |
Pages: |
2029-2039 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mulligan MK |
Year: |
2018 |
Journal: |
Front Genet |
Title: |
Genetic Contribution to Initial and Progressive Alcohol Intake Among Recombinant Inbred Strains of Mice. |
Volume: |
9 |
|
Pages: |
370 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liang D |
Year: |
2022 |
Journal: |
Autophagy |
Title: |
m6A reader YTHDC1 modulates autophagy by targeting SQSTM1 in diabetic skin. |
Volume: |
18 |
Issue: |
6 |
Pages: |
1318-1337 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Huttlin EL |
Year: |
2010 |
Journal: |
Cell |
Title: |
A tissue-specific atlas of mouse protein phosphorylation and expression. |
Volume: |
143 |
Issue: |
7 |
Pages: |
1174-89 |
|
•
•
•
•
•
|
Publication |
First Author: |
Church DM |
Year: |
2009 |
Journal: |
PLoS Biol |
Title: |
Lineage-specific biology revealed by a finished genome assembly of the mouse. |
Volume: |
7 |
Issue: |
5 |
Pages: |
e1000112 |
|
•
•
•
•
•
|