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Search results 301 to 383 out of 383 for Hoxd1

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Type Details Score
Publication
28041967 | J:239300
First Author: Neijts R
Year: 2017
Journal: Dev Biol
Title: Cdx is crucial for the timing mechanism driving colinear Hox activation and defines a trunk segment in the Hox cluster topology.
Volume: 422
Issue: 2
Pages: 146-154
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Publication
17698011 | J:126770
First Author: Hodge LK
Year: 2007
Journal: Neuron
Title: Retrograde BMP signaling regulates trigeminal sensory neuron identities and the formation of precise face maps.
Volume: 55
Issue: 4
Pages: 572-86
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Publication
1358459 | J:3235
First Author: Scott MP
Year: 1992
Journal: Cell
Title: Vertebrate homeobox gene nomenclature.
Volume: 71
Issue: 4
Pages: 551-3
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Publication
28009287 | J:239303
First Author: Amin S
Year: 2016
Journal: Cell Rep
Title: Cdx and T Brachyury Co-activate Growth Signaling in the Embryonic Axial Progenitor Niche.
Volume: 17
Issue: 12
Pages: 3165-3177
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Publication
18498735 | J:145293
First Author: Wickramasinghe SR
Year: 2008
Journal: Neuron
Title: Serum response factor mediates NGF-dependent target innervation by embryonic DRG sensory neurons.
Volume: 58
Issue: 4
Pages: 532-45
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Publication
22701719 | J:225113
First Author: Zhang Y
Year: 2012
Journal: PLoS One
Title: Reduction of Hox gene expression by histone H1 depletion.
Volume: 7
Issue: 6
Pages: e38829
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Publication
33257809 | J:308865
First Author: Higashijima Y
Year: 2020
Journal: Commun Biol
Title: Lysine demethylase 7a regulates murine anterior-posterior development by modulating the transcription of Hox gene cluster.
Volume: 3
Issue: 1
Pages: 725
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Publication
15042701 | J:89197
First Author: Patterson LT
Year: 2004
Journal: Dev Dyn
Title: Atlas of Hox gene expression in the developing kidney.
Volume: 229
Issue: 4
Pages: 771-9
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Publication
19204410 | J:149067
First Author: Grier DG
Year: 2009
Journal: Neonatology
Title: Quantification of Hox and surfactant protein-B transcription during murine lung development.
Volume: 96
Issue: 1
Pages: 50-60
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Publication
32479258 | J:290220
   
First Author: Sato T
Year: 2020
Journal: Elife
Title: Lin28a/let-7 pathway modulates the Hox code via Polycomb regulation during axial patterning in vertebrates.
Volume: 9
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Publication
28188179 | J:247259
First Author: Naruse C
Year: 2017
Journal: FASEB J
Title: New insights into the role of Jmjd3 and Utx in axial skeletal formation in mice.
Volume: 31
Issue: 6
Pages: 2252-2266
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Publication
16971476 | J:119560
First Author: Choi MY
Year: 2006
Journal: Development
Title: A dynamic expression survey identifies transcription factors relevant in mouse digestive tract development.
Volume: 133
Issue: 20
Pages: 4119-29
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Publication
29031500 | J:257654
First Author: Memic F
Year: 2018
Journal: Gastroenterology
Title: Transcription and Signaling Regulators in Developing Neuronal Subtypes of Mouse and Human Enteric Nervous System.
Volume: 154
Issue: 3
Pages: 624-636
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Publication
20059953 | J:156017
First Author: Yokoyama S
Year: 2009
Journal: Dev Cell
Title: A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Volume: 17
Issue: 6
Pages: 836-48
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Publication
- | J:94790
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Mouse Synonym Curation
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Publication
15618518 | J:91257
First Author: Gray PA
Year: 2004
Journal: Science
Title: Mouse brain organization revealed through direct genome-scale TF expression analysis.
Volume: 306
Issue: 5705
Pages: 2255-7
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Publication
- | J:72247
       
First Author: DDB, FB, MGI, GOA, ZFIN curators
Year: 2001
Title: Gene Ontology annotation through association of InterPro records with GO terms
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Publication
16602821 | J:162220
First Author: Magdaleno S
Year: 2006
Journal: PLoS Biol
Title: BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Volume: 4
Issue: 4
Pages: e86
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Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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GXD Expression
GXD Expression
 
Probe: MGI:3699708
Assay Type: RNA in situ
Annotation Date: 2024-05-17
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3705414
Pattern: Regionally restricted
Stage: TS14
Assay Id: MGI:7640063
Age: embryonic day 9.0
Note: Coexpressed with Hoxd1 in the S-I domain.
Specimen Label: 3A-1
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:3699708
Assay Type: RNA in situ
Annotation Date: 2024-05-17
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3705414
Pattern: Regionally restricted
Stage: TS14
Assay Id: MGI:7640063
Age: embryonic day 9.0
Note: Coexpressed with Hoxd1 in the S-I domain.
Specimen Label: 3A-2
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:3699708
Assay Type: RNA in situ
Annotation Date: 2024-05-17
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3705414
Pattern: Regionally restricted
Stage: TS14
Assay Id: MGI:7640070
Age: embryonic day 9.0
Note: Coexpressed with Hoxd1 in the S-I domain.
Specimen Label: 3B left
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:3699708
Assay Type: RNA in situ
Annotation Date: 2024-05-17
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:3705414
Pattern: Regionally restricted
Stage: TS14
Assay Id: MGI:7640063
Age: embryonic day 9.0
Note: Coexpressed with weak Hoxd1 in the S-I domain.
Specimen Label: 3A-5
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
 
Probe: MGI:1932050
Assay Type: RNA in situ
Annotation Date: 2024-05-17
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3705415
Pattern: Regionally restricted
Stage: TS15
Assay Id: MGI:7640059
Age: embryonic day 9.5
Note: Overlapped by a broad and strong posterior Hoxd1 band in S-I.
Specimen Label: 1F-1
Detected: true
Specimen Num: 7
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GXD Expression
GXD Expression
 
Probe: MGI:1932050
Assay Type: RNA in situ
Annotation Date: 2024-05-17
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3705415
Pattern: Regionally restricted
Stage: TS15
Assay Id: MGI:7640059
Age: embryonic day 9.5
Note: Overlapped with Hoxd1 expression by a narrower band in the anterior half of S-I.
Specimen Label: 1F-2
Detected: true
Specimen Num: 8
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GXD Expression
GXD Expression
 
Probe: MGI:1932050
Assay Type: RNA in situ
Annotation Date: 2024-05-17
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3705415
Pattern: Regionally restricted
Stage: TS15
Assay Id: MGI:7640059
Age: embryonic day 9.5
Note: Overlapped with Hoxd1 expression by a narrower band in the anterior half of S-I.
Specimen Label: 1F-3
Detected: true
Specimen Num: 9
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Allele
Del(2Hoxd1-Hoxd4)55Ddu | MGI:5318044
Name: deletion, Chr 2, Denis Duboule 55
Allele Type: Targeted
Attribute String: Null/knockout
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GXD Expression
GXD Expression
 
Probe: MGI:1932050
Assay Type: RNA in situ
Annotation Date: 2024-05-17
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3705415
Pattern: Regionally restricted
Stage: TS15
Assay Id: MGI:7640059
Age: embryonic day 9.5
Note: Expression was detectable posterior to the Hoxd1 band in S0 and colocalized with a weak incipient, more posterior, Hoxd1 band (S-I).
Specimen Label: 1E-3
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
 
Probe: MGI:1932050
Assay Type: RNA in situ
Annotation Date: 2024-05-17
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3705415
Pattern: Regionally restricted
Stage: TS15
Assay Id: MGI:7640059
Age: embryonic day 9.5
Note: Expression was detectable posterior to the Hoxd1 band in S0 and colocalized with a weak incipient, more posterior, Hoxd1 band (S-I).
Specimen Label: 1E-4
Detected: true
Specimen Num: 6
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Allele
Del(2Hoxd1-Hoxd4)56Ddu | MGI:5318045
Name: deletion, Chr 2, Denis Duboule 56
Allele Type: Targeted
Attribute String: Null/knockout
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GXD Expression
GXD Expression
 
Probe: MGI:3699708
Assay Type: RNA in situ
Annotation Date: 2024-05-17
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:3705414
Pattern: Regionally restricted
Stage: TS14
Assay Id: MGI:7640063
Age: embryonic day 9.0
Note: Localized to the posterior half of S0, which was fully complementary to the expression of Hoxd1. The progression of this strong band was accompanied by the appearance and subsequent narrowing of the Hoxd1 stripe.
Specimen Label: 3A-3
Detected: true
Specimen Num: 3
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Allele
Hoxd<tm12Ddu> | MGI:3051374
 
Name: homeobox D cluster; targeted mutation 12, Denis Duboule
Allele Type: Targeted
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Allele
Del(2Hoxd1-Hoxd10)26Ddu | MGI:3689842
Name: deletion, Chr 2, Denis Duboule 26
Allele Type: Targeted
Attribute String: Null/knockout
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Allele
Del(2Hoxd1-Hoxd13)54Ddu | MGI:5318043
Name: deletion, Chr 2, Denis Duboule 54
Allele Type: Targeted
Attribute String: Null/knockout
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HT Experiment
GSE103086 | CONTROL OF GROWTH AND GUT MATURATION BY HoxD GENES AND THE ASSOCIATED LncRNA Haglr
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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Publication
22863319 | J:199759
First Author: Zakany J
Year: 2012
Journal: Curr Biol
Title: A genetic basis for altered sexual behavior in mutant female mice.
Volume: 22
Issue: 18
Pages: 1676-80
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Genotype
Genotype
Symbol: Del(2Hoxd1-Hoxd10)26Ddu/+
Background: involves: 129S2/SvPas * C57BL/6 * DBA/2
Zygosity: ht
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Del(2Hoxd1-Hoxd10)26Ddu/Del(2Hoxd1-Hoxd10)26Ddu
Background: involves: 129S2/SvPas * C57BL/6 * DBA/2
Zygosity: hm
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Hoxd/Hoxd<+>
Background: involves: 129S2/SvPas * C57BL/6 * DBA/2
Zygosity: ht
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Del(2Hoxd1-Hoxd10)26Ddu/+
Background: involves: 129S2/SvPas * C57BL/6 * CBA
Zygosity: ht
Has Mutant Allele: true
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Publication
29042517 | J:252916
First Author: Zakany J
Year: 2017
Journal: Proc Natl Acad Sci U S A
Title: Control of growth and gut maturation by HoxD genes and the associated lncRNA Haglr.
Volume: 114
Issue: 44
Pages: E9290-E9299
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Protein
D3Z4E1
Organism: Mus musculus/domesticus
Length: 138  
Fragment?: false
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Protein
Q3ZAX9
Organism: Mus musculus/domesticus
Length: 286  
Fragment?: false
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Publication
1974228 | -
First Author: Kimmel BE
Year: 1990
Journal: Genes Dev
Title: The homeo domain protein rough is expressed in a subset of cells in the developing Drosophila eye where it can specify photoreceptor cell subtype.
Volume: 4
Issue: 5
Pages: 712-27
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Publication
33375038 | -
 
First Author: Paço A
Year: 2020
Journal: Cancers (Basel)
Title: Roles of the HOX Proteins in Cancer Invasion and Metastasis.
Volume: 13
Issue: 1
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Publication
27144914 | -
First Author: Vogel M
Year: 2016
Journal: Am J Med Genet A
Title: Homozygous HOXB1 loss-of-function mutation in a large family with hereditary congenital facial paresis.
Volume: 170
Issue: 7
Pages: 1813-9
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Publication
32804075 | J:302497
   
First Author: Stefanovic S
Year: 2020
Journal: Elife
Title: Hox-dependent coordination of mouse cardiac progenitor cell patterning and differentiation.
Volume: 9
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Publication
26284287 | J:226322
First Author: Roux M
Year: 2015
Journal: Dev Biol
Title: Hoxb1 regulates proliferation and differentiation of second heart field progenitors in pharyngeal mesoderm and genetically interacts with Hoxa1 during cardiac outflow tract development.
Volume: 406
Issue: 2
Pages: 247-58
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Publication
27956219 | J:240035
 
First Author: Roux M
Year: 2017
Journal: Mech Dev
Title: Hoxa1 and Hoxb1 are required for pharyngeal arch artery development.
Volume: 143
Pages: 1-8
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Publication
26565624 | -
First Author: Han L
Year: 2015
Journal: PLoS One
Title: HOXB1 Is a Tumor Suppressor Gene Regulated by miR-3175 in Glioma.
Volume: 10
Issue: 11
Pages: e0142387
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Publication
30134070 | J:264530
First Author: Zaffran S
Year: 2018
Journal: Genesis
Title: Ectopic expression of Hoxb1 induces cardiac and craniofacial malformations.
Volume: 56
Issue: 6-7
Pages: e23221
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Publication
16155570 | -
First Author: Tischfield MA
Year: 2005
Journal: Nat Genet
Title: Homozygous HOXA1 mutations disrupt human brainstem, inner ear, cardiovascular and cognitive development.
Volume: 37
Issue: 10
Pages: 1035-7
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Publication
21501586 | -
First Author: Park H
Year: 2011
Journal: Biochem Biophys Res Commun
Title: Homeobox D1 regulates angiogenic functions of endothelial cells via integrin β1 expression.
Volume: 408
Issue: 1
Pages: 186-92
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Publication
18412118 | -
First Author: Bosley TM
Year: 2008
Journal: Am J Med Genet A
Title: The clinical spectrum of homozygous HOXA1 mutations.
Volume: 146A
Issue: 10
Pages: 1235-40
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Protein Domain
IPR046327 | HXA1/B1/D1
Type: Family
Description: This entry represents a group of homeobox proteins, including HOX-A1/B1/D1 (HXA1/B1/D1) and related proteins from animals. The homeobox domain is a DNA binding domain. Human HOX genes are critical for development of the central nervous system []. They have been also implicated in vascular development and angiogenesis, particularly with regulation of genes involved in cell-cell or cell-extracellular matrix (ECM) interactions []. HXA1 has been linked to the Bosley-Salih-Alorainy syndrome (BSAS) or the Athabascan brainstem dysgenesis syndrome (ABDS) []. HXB1 is a transcription factor that play important roles in early vertebrate development [, , , , ]and its expression is associated with tumours [, ]. HOXD1 plays a significant role in endothelial cell functions by regulating the expression of ITGB1 [].Homeobox protein rough from Drosophila melanogaster is a member of this group of proteins. It is required to establish the unique cell identity of photoreceptors R2 and R5 and consequently for ommatidial assembly in the developing eye imaginal disk in the organism [, ].
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Publication
12385756 | J:80054
First Author: Roelen BA
Year: 2002
Journal: Mech Dev
Title: Hox cluster polarity in early transcriptional availability: a high order regulatory level of clustered Hox genes in the mouse.
Volume: 119
Issue: 1
Pages: 81-90
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Publication
29273679 | J:260451
First Author: Rodríguez-Carballo E
Year: 2017
Journal: Genes Dev
Title: The HoxD cluster is a dynamic and resilient TAD boundary controlling the segregation of antagonistic regulatory landscapes.
Volume: 31
Issue: 22
Pages: 2264-2281
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Publication
22278926 | J:182758
First Author: Tschopp P
Year: 2012
Journal: Development
Title: Bimodal control of Hoxd gene transcription in the spinal cord defines two regulatory subclusters.
Volume: 139
Issue: 5
Pages: 929-39
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Protein
Q61673
Organism: Mus musculus/domesticus
Length: 27  
Fragment?: true
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Publication
19266017 | J:146752
First Author: Tschopp P
Year: 2009
Journal: PLoS Genet
Title: Uncoupling time and space in the collinear regulation of Hox genes.
Volume: 5
Issue: 3
Pages: e1000398
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Publication
27856734 | J:239094
First Author: Schep R
Year: 2016
Journal: Proc Natl Acad Sci U S A
Title: Control of Hoxd gene transcription in the mammary bud by hijacking a preexisting regulatory landscape.
Volume: 113
Issue: 48
Pages: E7720-E7729
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Protein
Q01822
Organism: Mus musculus/domesticus
Length: 328  
Fragment?: false
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Protein
P17919
Organism: Mus musculus/domesticus
Length: 297  
Fragment?: false
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Protein
P09022
Organism: Mus musculus/domesticus
Length: 331  
Fragment?: false
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Protein
B9EHK8
Organism: Mus musculus/domesticus
Length: 337  
Fragment?: false
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Protein
Q8BNI8
Organism: Mus musculus/domesticus
Length: 336  
Fragment?: false
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Protein
B9EHK7
Organism: Mus musculus/domesticus
Length: 336  
Fragment?: false
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom