Type |
Details |
Score |
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
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Title: |
MGI Sequence Curation Reference |
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•
•
•
•
•
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Publication |
First Author: |
Kawai J |
Year: |
2001 |
Journal: |
Nature |
Title: |
Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
Issue: |
6821 |
Pages: |
685-90 |
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•
•
•
•
•
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Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
Title: |
Nomenclature Committee Use |
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•
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•
•
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Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
Pages: |
14109-14 |
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•
•
•
•
•
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Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
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•
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•
•
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
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•
•
•
•
•
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Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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•
•
•
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•
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Publication |
First Author: |
GOA curators |
Year: |
2016 |
|
Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
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•
•
•
•
•
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Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
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•
•
•
•
•
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Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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•
•
•
•
•
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Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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•
•
•
•
•
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Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
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•
•
•
•
•
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Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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•
•
•
•
•
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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•
•
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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•
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•
|
Gene |
Type: |
gene |
Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chimpanzee |
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•
•
•
•
•
|
UniProt Feature |
Begin: |
2 |
Description: |
Histone acetyltransferase KAT2A |
Type: |
chain |
End: |
830 |
|
•
•
•
•
•
|
UniProt Feature |
Begin: |
98 |
Description: |
N6-acetyllysine; by KAT2A and KAT2B |
Type: |
modified residue |
End: |
98 |
|
•
•
•
•
•
|
UniProt Feature |
Begin: |
101 |
Description: |
N6-acetyllysine; by KAT2A and KAT2B |
Type: |
modified residue |
End: |
101 |
|
•
•
•
•
•
|
UniProt Feature |
Begin: |
92 |
Description: |
N6-acetyllysine; by KAT2A and KAT2B |
Type: |
modified residue |
End: |
92 |
|
•
•
•
•
•
|
UniProt Feature |
Begin: |
102 |
Description: |
N6-acetyllysine; by KAT2A and KAT2B; alternate |
Type: |
modified residue |
End: |
102 |
|
•
•
•
•
•
|
Allele |
Name: |
K(lysine) acetyltransferase 2A; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
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•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
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•
•
•
•
•
|
Allele |
Name: |
K(lysine) acetyltransferase 2A; targeted mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Targeted |
Attribute String: |
Conditional ready, No functional change |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, mutant strain, targeted mutation |
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•
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•
|
Publication |
First Author: |
Carracedo A |
Year: |
2012 |
Journal: |
J Clin Invest |
Title: |
A metabolic prosurvival role for PML in breast cancer. |
Volume: |
122 |
Issue: |
9 |
Pages: |
3088-100 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yang XJ |
Year: |
1996 |
Journal: |
Nature |
Title: |
A p300/CBP-associated factor that competes with the adenoviral oncoprotein E1A. |
Volume: |
382 |
Issue: |
6589 |
Pages: |
319-24 |
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•
•
•
•
•
|
Publication |
First Author: |
Wang YL |
Year: |
2008 |
Journal: |
J Biol Chem |
Title: |
Human ATAC Is a GCN5/PCAF-containing acetylase complex with a novel NC2-like histone fold module that interacts with the TATA-binding protein. |
Volume: |
283 |
Issue: |
49 |
Pages: |
33808-15 |
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•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Eukaryotic GCN5 acetyltransferases influence diverse biological processes by acetylating histones and non-histone proteins and regulating chromatin and gene-specific transcription as part of multiprotein complexes. Vertebrate organisms, express two paralogous GCN5-like acetyltransferases, GCN5 and PCAF (also known as KAT2A and KAT2B), which is included in this entry []. GCN5/PCAF is a component of the ATAC complex, a complex with histone acetyltransferase activity on histones H3 and H4 [, ]. |
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•
•
•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
211
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
66
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
118
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Grant PA |
Year: |
1997 |
Journal: |
Genes Dev |
Title: |
Yeast Gcn5 functions in two multisubunit complexes to acetylate nucleosomal histones: characterization of an Ada complex and the SAGA (Spt/Ada) complex. |
Volume: |
11 |
Issue: |
13 |
Pages: |
1640-50 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry includes histone acetyltransferases GCN5, KAT2A and KAT2B (all of which are included in ). GCN5 acetylates histones H2B, H3 and H4, providing a specific tag for epigenetic transcription activation. GCN5 is a component of the transcription regulatory histone acetylation (HAT) complexes SAGA [], SLIK [], SALSA []and ADA []. Mammals have two paralogues: KAT2A (also known as GCN5) and KAT2B. KAT2A acetylates core histones to provide a specific tag for epigenetic transcription activation, but not nucleosome core particles. It also acetylates proteins such as CEBPB []. KAT2A is a component of the ATAC complex, which has acetyltransferase activity on histones H3 and H4 []. KAT2B (also known as P300/calcium-binding protein (CBP)-associated factor or PCAF) can acetylate the core histones H3 and H4 as well as nucleosome core particles and non-histone proteins such as ACLY [].The transcription regulatory histone acetylation complex Spt-Ada-Gcn5 acetyltransferase (SAGA) is involved in RNA polymerase II-dependent transcriptional regulation of approximately 10% of yeast genes. SAGA preferentially acetylates histones H3 and H2B and deubiquitinates histone H2B []. SAGA is known as PCAF in vertebrates and PCAF acetylates nucleosomal histone H3 []. The SAGA complex consists of at least TRA1, CHD1, SPT7, TAF5, ADA3, SGF73, SPT20/ADA5, SPT8, TAF12, TAF6, HFI1/ADA1, UBP8, GCN5, ADA2, SPT3, SGF29, TAF10, TAF9, SGF11 and SUS1, and some of these components are present as two copies. The complex is built up from distinct modules, each of which has a separate function and crosslinks with either other proteins or other modules in the complex [].SLIK (SAGA-like) is a multi-subunit histone acetyltransferase complex that preferentially acetylates histones H3 and H2B and deubiquitinates histone H2B. It is an embellishment of the SAGA complex. The yeast SLIK complex consists of at least TRA1, CHD1, SPT7, CC TAF5, ADA3, SPT20, RTG2, TAF12, TAF6, HFI1, UBP8 (a deubiquitinase), GCN5, ADA2, SPT3, SGF29, TAF10 and TAF9 [, ].The yeast SALSA complex is an altered form of the SAGA complex and consists of at least TRA1, SPT7 (C-terminal truncated form), TAF5, ADA3, SPT20, TAF12, TAF6, HFI1, GCN5, ADA2 and SPT3 [].The ADA complex is a transcription regulatory histone acetylation (HAT) complex. ADA preferentially acetylates nucleosomal histones H3 (at 'Lys-14' and 'Lys-18') and H2B. The complex consists of at least ADA2, ADA3, AHC1, and GCN5. AHC1 is required for the overall structural integrity of the ADA complex []. |
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Publication |
First Author: |
Tzelepis K |
Year: |
2016 |
Journal: |
Cell Rep |
Title: |
A CRISPR Dropout Screen Identifies Genetic Vulnerabilities and Therapeutic Targets in Acute Myeloid Leukemia. |
Volume: |
17 |
Issue: |
4 |
Pages: |
1193-1205 |
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•
•
•
•
|
Publication |
First Author: |
Zhang R |
Year: |
2023 |
Journal: |
iScience |
Title: |
Histone malonylation is regulated by SIRT5 and KAT2A. |
Volume: |
26 |
Issue: |
3 |
Pages: |
106193 |
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•
•
•
•
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Publication |
First Author: |
Lin R |
Year: |
2013 |
Journal: |
Mol Cell |
Title: |
Acetylation stabilizes ATP-citrate lyase to promote lipid biosynthesis and tumor growth. |
Volume: |
51 |
Issue: |
4 |
Pages: |
506-518 |
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•
•
•
•
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Publication |
First Author: |
Grant PA |
Year: |
1999 |
Journal: |
J Biol Chem |
Title: |
Expanded lysine acetylation specificity of Gcn5 in native complexes. |
Volume: |
274 |
Issue: |
9 |
Pages: |
5895-900 |
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•
•
•
•
|
Publication |
First Author: |
Grant PA |
Year: |
1998 |
Journal: |
Mol Cell |
Title: |
The ATM-related cofactor Tra1 is a component of the purified SAGA complex. |
Volume: |
2 |
Issue: |
6 |
Pages: |
863-7 |
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•
•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
660
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
473
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
813
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
829
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
830
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
833
 |
Fragment?: |
false |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
813
 |
Fragment?: |
false |
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•
•
•
•
|
Publication |
First Author: |
Sterner DE |
Year: |
2002 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
SALSA, a variant of yeast SAGA, contains truncated Spt7, which correlates with activated transcription. |
Volume: |
99 |
Issue: |
18 |
Pages: |
11622-7 |
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•
•
•
•
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Publication |
First Author: |
Pray-Grant MG |
Year: |
2005 |
Journal: |
Nature |
Title: |
Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation. |
Volume: |
433 |
Issue: |
7024 |
Pages: |
434-8 |
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•
•
•
•
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Publication |
First Author: |
Pray-Grant MG |
Year: |
2002 |
Journal: |
Mol Cell Biol |
Title: |
The novel SLIK histone acetyltransferase complex functions in the yeast retrograde response pathway. |
Volume: |
22 |
Issue: |
24 |
Pages: |
8774-86 |
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•
•
•
•
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Publication |
First Author: |
Han Y |
Year: |
2014 |
Journal: |
EMBO J |
Title: |
Architecture of the Saccharomyces cerevisiae SAGA transcription coactivator complex. |
Volume: |
33 |
Issue: |
21 |
Pages: |
2534-46 |
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•
•
•
•
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Publication |
First Author: |
Ogryzko VV |
Year: |
1998 |
Journal: |
Cell |
Title: |
Histone-like TAFs within the PCAF histone acetylase complex. |
Volume: |
94 |
Issue: |
1 |
Pages: |
35-44 |
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•
•
•
•
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Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
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•
•
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•
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Publication |
First Author: |
Church DM |
Year: |
2009 |
Journal: |
PLoS Biol |
Title: |
Lineage-specific biology revealed by a finished genome assembly of the mouse. |
Volume: |
7 |
Issue: |
5 |
Pages: |
e1000112 |
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•
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