Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:5508517 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1795623 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5543228 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:20838 |
|
Specimen Label: |
GUDMAP:20838 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4845271 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-12-22 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1618417 |
Pattern: |
Not Specified |
Stage: |
TS17 |
Assay Id: |
MGI:4848905 |
Age: |
embryonic day 10.5 |
|
|
Specimen Label: |
Table S4 - E10.5 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4845271 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-12-22 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1618419 |
Pattern: |
Not Specified |
Stage: |
TS19 |
Assay Id: |
MGI:4848905 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
Table S4 - E11.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3281228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692341 |
Age: |
postnatal adult |
Image: |
MRC Harwell_1311188 |
|
Specimen Label: |
MRC Harwell_1311188 |
Detected: |
true |
Specimen Num: |
18 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3506549 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:2850023 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:5539547 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:5876 |
|
Specimen Label: |
GUDMAP:5876 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1416062 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679823 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4825786 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_003485_09 |
|
Specimen Label: |
euxassay_003485_09 |
Detected: |
true |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1416062 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679823 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4825786 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_003485_17 |
|
Specimen Label: |
euxassay_003485_17 |
Detected: |
true |
Specimen Num: |
16 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3506549 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:2875323 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:5539547 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12286 |
|
Specimen Label: |
GUDMAP:12286 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5508517 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:3151023 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5543228 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:20839 |
|
Specimen Label: |
GUDMAP:20839 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:2991528 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692341 |
Age: |
postnatal adult |
Image: |
MRC Harwell_1311185 |
|
Specimen Label: |
MRC Harwell_1311185 |
Detected: |
true |
Specimen Num: |
15 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1689428 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692341 |
Age: |
postnatal adult |
Image: |
MRC Harwell_1311186 |
|
Specimen Label: |
MRC Harwell_1311186 |
Detected: |
true |
Specimen Num: |
16 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1689428 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692341 |
Age: |
postnatal adult |
Image: |
MRC Harwell_1311189 |
|
Specimen Label: |
MRC Harwell_1311189 |
Detected: |
true |
Specimen Num: |
19 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5508517 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:2860123 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5543228 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:20838 |
|
Specimen Label: |
GUDMAP:20838 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3506549 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1796223 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:5539547 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:5876 |
|
Specimen Label: |
GUDMAP:5876 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1796228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692341 |
Age: |
postnatal adult |
Image: |
MRC Harwell_1311185 |
|
Specimen Label: |
MRC Harwell_1311185 |
Detected: |
true |
Specimen Num: |
15 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3506549 |
Assay Type: |
RNA in situ |
Annotation Date: |
2021-03-30 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3817723 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:6513171 |
Age: |
embryonic day 15.5 |
|
Note: |
Both sexes were examined; no reproducible differences were detected between them. |
Specimen Label: |
Table 3 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
Publication |
First Author: |
Suda S |
Year: |
2006 |
Journal: |
Biochem Biophys Res Commun |
Title: |
Postnatal expression of KLF12 in the inner medullary collecting ducts of kidney and its trans-activation of UT-A1 urea transporter promoter. |
Volume: |
344 |
Issue: |
1 |
Pages: |
246-52 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ferent J |
Year: |
2019 |
Journal: |
Cell Rep |
Title: |
The Ciliary Protein Arl13b Functions Outside of the Primary Cilium in Shh-Mediated Axon Guidance. |
Volume: |
29 |
Issue: |
11 |
Pages: |
3356-3366.e3 |
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•
•
•
•
•
|
Publication |
First Author: |
Lai HC |
Year: |
2011 |
Journal: |
J Neurosci |
Title: |
In vivo neuronal subtype-specific targets of Atoh1 (Math1) in dorsal spinal cord. |
Volume: |
31 |
Issue: |
30 |
Pages: |
10859-71 |
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•
•
•
•
•
|
Publication |
First Author: |
Suske G |
Year: |
2005 |
Journal: |
Genomics |
Title: |
Mammalian SP/KLF transcription factors: bring in the family. |
Volume: |
85 |
Issue: |
5 |
Pages: |
551-6 |
|
•
•
•
•
•
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Publication |
First Author: |
Bouilloux F |
Year: |
2016 |
Journal: |
Elife |
Title: |
Loss of the transcription factor Meis1 prevents sympathetic neurons target-field innervation and increases susceptibility to sudden cardiac death. |
Volume: |
5 |
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|
•
•
•
•
•
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Publication |
First Author: |
Zhong J |
Year: |
2007 |
Journal: |
Nat Neurosci |
Title: |
Raf kinase signaling functions in sensory neuron differentiation and axon growth in vivo. |
Volume: |
10 |
Issue: |
5 |
Pages: |
598-607 |
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•
•
•
•
•
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Publication |
First Author: |
Wilson NK |
Year: |
2010 |
Journal: |
Cell Stem Cell |
Title: |
Combinatorial transcriptional control in blood stem/progenitor cells: genome-wide analysis of ten major transcriptional regulators. |
Volume: |
7 |
Issue: |
4 |
Pages: |
532-44 |
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•
•
•
•
•
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Publication |
First Author: |
Kc R |
Year: |
2024 |
Journal: |
Commun Biol |
Title: |
Multimodal Hox5 activity generates motor neuron diversity. |
Volume: |
7 |
Issue: |
1 |
Pages: |
1166 |
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•
•
•
•
•
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Publication |
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Lo Giudice Q |
Year: |
2019 |
Journal: |
Development |
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Single-cell transcriptional logic of cell-fate specification and axon guidance in early-born retinal neurons. |
Volume: |
146 |
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17 |
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|
•
•
•
•
•
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Publication |
First Author: |
Lanier J |
Year: |
2009 |
Journal: |
Dev Dyn |
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Brn3a regulates the transition from neurogenesis to terminal differentiation and represses non-neural gene expression in the trigeminal ganglion. |
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238 |
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12 |
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3065-79 |
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•
•
•
•
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Publication |
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Memic F |
Year: |
2018 |
Journal: |
Gastroenterology |
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Transcription and Signaling Regulators in Developing Neuronal Subtypes of Mouse and Human Enteric Nervous System. |
Volume: |
154 |
Issue: |
3 |
Pages: |
624-636 |
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•
•
•
•
•
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Publication |
First Author: |
Bailey PJ |
Year: |
2006 |
Journal: |
Exp Cell Res |
Title: |
A global genomic transcriptional code associated with CNS-expressed genes. |
Volume: |
312 |
Issue: |
16 |
Pages: |
3108-19 |
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•
•
•
•
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Publication |
First Author: |
Wiese CB |
Year: |
2012 |
Journal: |
Front Neurosci |
Title: |
A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract. |
Volume: |
6 |
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Pages: |
130 |
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•
•
•
•
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Publication |
First Author: |
Guo G |
Year: |
2010 |
Journal: |
Dev Cell |
Title: |
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. |
Volume: |
18 |
Issue: |
4 |
Pages: |
675-85 |
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•
•
•
•
•
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Publication |
First Author: |
Yokoyama S |
Year: |
2009 |
Journal: |
Dev Cell |
Title: |
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. |
Volume: |
17 |
Issue: |
6 |
Pages: |
836-48 |
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•
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Publication |
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Dickinson ME |
Year: |
2016 |
Journal: |
Nature |
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High-throughput discovery of novel developmental phenotypes. |
Volume: |
537 |
Issue: |
7621 |
Pages: |
508-514 |
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•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
FANTOM2 Data Curation in Mouse Genome Informatics |
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•
•
•
•
•
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Publication |
First Author: |
Gray PA |
Year: |
2004 |
Journal: |
Science |
Title: |
Mouse brain organization revealed through direct genome-scale TF expression analysis. |
Volume: |
306 |
Issue: |
5705 |
Pages: |
2255-7 |
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•
•
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•
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Publication |
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Thompson CL |
Year: |
2014 |
Journal: |
Neuron |
Title: |
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. |
Volume: |
83 |
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2 |
Pages: |
309-323 |
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•
•
•
•
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Publication |
First Author: |
Koscielny G |
Year: |
2014 |
Journal: |
Nucleic Acids Res |
Title: |
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. |
Volume: |
42 |
Issue: |
Database issue |
Pages: |
D802-9 |
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•
•
•
•
•
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Publication |
First Author: |
Bedogni F |
Year: |
2021 |
Journal: |
Front Mol Neurosci |
Title: |
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
Volume: |
14 |
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Pages: |
686034 |
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•
•
•
•
•
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Publication |
First Author: |
International Knockout Mouse Consortium |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of modified allele data from IKMC and creation of new knockout alleles |
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•
•
•
•
•
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Publication |
First Author: |
International Mouse Strain Resource |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of germline transmission data for alleles from IMSR strain data |
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•
•
•
•
•
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Publication |
First Author: |
GUDMAP Consortium |
Year: |
2004 |
Journal: |
www.gudmap.org |
Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
Year: |
2014 |
Journal: |
Database Release |
Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
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•
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•
•
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Publication |
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Hansen GM |
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2008 |
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Genome Res |
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Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
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18 |
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10 |
Pages: |
1670-9 |
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•
•
•
•
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Publication |
First Author: |
Helmholtz Zentrum Muenchen GmbH |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
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•
•
•
•
•
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Publication |
First Author: |
Magdaleno S |
Year: |
2006 |
Journal: |
PLoS Biol |
Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
Volume: |
4 |
Issue: |
4 |
Pages: |
e86 |
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Science |
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The transcriptional landscape of the mammalian genome. |
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5740 |
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1559-63 |
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2024 |
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Genetic determinants of micronucleus formation in vivo. |
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8002 |
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Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
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Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
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Cyagen Biosciences Inc. |
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Cyagen Biosciences Website. |
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AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
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Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
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Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
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GOA curators |
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Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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Publication |
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Nature |
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Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
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420 |
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Publication |
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The Gene Ontology Consortium |
Year: |
2010 |
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Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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Publication |
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PLoS Biol |
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A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
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Publication |
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Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
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Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
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Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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Publication |
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Year: |
2010 |
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Title: |
Annotation inferences using phylogenetic trees |
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Mouse Genome Database and National Center for Biotechnology Information |
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Database Release |
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Entrez Gene Load |
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Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
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Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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•
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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•
•
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
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Journal: |
Database Procedure |
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Automatic Encodes (AutoE) Reference |
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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Publication |
First Author: |
Wang Z |
Year: |
2017 |
Journal: |
Neurobiol Dis |
Title: |
Combined chondroitinase and KLF7 expression reduce net retraction of sensory and CST axons from sites of spinal injury. |
Volume: |
99 |
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Pages: |
24-35 |
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HT Experiment |
Series Id: |
GSE3595 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1194
 |
Fragment?: |
false |
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Publication |
First Author: |
Klein RH |
Year: |
2017 |
Journal: |
J Biol Chem |
Title: |
Characterization of enhancers and the role of the transcription factor KLF7 in regulating corneal epithelial differentiation. |
Volume: |
292 |
Issue: |
46 |
Pages: |
18937-18950 |
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Publication |
First Author: |
Laub F |
Year: |
2001 |
Journal: |
Mech Dev |
Title: |
Embryonic expression of Krüppel-like factor 6 in neural and non-neural tissues. |
Volume: |
106 |
Issue: |
1-2 |
Pages: |
167-70 |
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Publication |
First Author: |
Oren Y |
Year: |
2015 |
Journal: |
Elife |
Title: |
Linking traits based on their shared molecular mechanisms. |
Volume: |
4 |
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Publication |
First Author: |
Kingsbury TJ |
Year: |
2007 |
Journal: |
Mol Cell Neurosci |
Title: |
Ca2+, CREB and krüppel: a novel KLF7-binding element conserved in mouse and human TRKB promoters is required for CREB-dependent transcription. |
Volume: |
35 |
Issue: |
3 |
Pages: |
447-55 |
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Publication |
First Author: |
Sumner CJ |
Year: |
2013 |
Journal: |
Am J Hum Genet |
Title: |
A dominant mutation in FBXO38 causes distal spinal muscular atrophy with calf predominance. |
Volume: |
93 |
Issue: |
5 |
Pages: |
976-83 |
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