Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:5299087 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:2826626 |
|
Stage: |
TS26 |
Assay Id: |
MGI:5543071 |
Age: |
embryonic day 17.5 |
Image: |
GUDMAP:14651 |
|
Specimen Label: |
GUDMAP:14651 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5299087 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:2826628 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5543071 |
Age: |
postnatal day 84 |
Image: |
GUDMAP:14652 |
|
Specimen Label: |
GUDMAP:14652 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5299087 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:2772126 |
|
Stage: |
TS26 |
Assay Id: |
MGI:5543071 |
Age: |
embryonic day 17.5 |
Image: |
GUDMAP:14651 |
|
Specimen Label: |
GUDMAP:14651 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2018-11-26 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3274820 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:6257881 |
Age: |
embryonic day 12.5 |
Image: |
4J |
|
Specimen Label: |
4J |
Detected: |
true |
Specimen Num: |
28 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2018-11-26 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1657715 |
Pattern: |
Not Specified |
Stage: |
TS15 |
Assay Id: |
MGI:6257881 |
Age: |
embryonic day 9.5 |
Image: |
2D |
|
Specimen Label: |
2D |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2018-11-26 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1657720 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:6257881 |
Age: |
embryonic day 12.5 |
Image: |
4E |
|
Specimen Label: |
4E |
Detected: |
true |
Specimen Num: |
23 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2018-11-26 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1657720 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:6257881 |
Age: |
embryonic day 12.5 |
Image: |
4L |
|
Specimen Label: |
4L |
Detected: |
true |
Specimen Num: |
30 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2018-11-26 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:3670720 |
|
Stage: |
TS20 |
Assay Id: |
MGI:6257881 |
Age: |
embryonic day 12.5 |
Image: |
4J |
|
Specimen Label: |
4J |
Detected: |
false |
Specimen Num: |
28 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2018-11-26 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3779720 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:6257881 |
Age: |
embryonic day 12.5 |
Image: |
4C |
|
Specimen Label: |
4C |
Detected: |
true |
Specimen Num: |
21 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tanaskovic N |
Year: |
2022 |
Journal: |
Life Sci Alliance |
Title: |
Polycomb group ring finger protein 6 suppresses Myc-induced lymphomagenesis. |
Volume: |
5 |
Issue: |
8 |
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•
•
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Publication |
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Year: |
2006 |
Journal: |
J Immunol |
Title: |
Fine mapping of collagen-induced arthritis quantitative trait loci in an advanced intercross line. |
Volume: |
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Issue: |
10 |
Pages: |
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Publication |
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Journal: |
Dev Biol |
Title: |
BDNF and NT4 play interchangeable roles in gustatory development. |
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Pages: |
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•
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Publication |
First Author: |
Yoshikawa T |
Year: |
2006 |
Journal: |
Gene Expr Patterns |
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High-throughput screen for genes predominantly expressed in the ICM of mouse blastocysts by whole mount in situ hybridization. |
Volume: |
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2 |
Pages: |
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Publication |
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2010 |
Journal: |
FASEB J |
Title: |
miRNA 34a, 100, and 137 modulate differentiation of mouse embryonic stem cells. |
Volume: |
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•
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Publication |
First Author: |
Shanghai Model Organisms Center |
Year: |
2017 |
Journal: |
MGI Direct Data Submission |
Title: |
Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
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•
•
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Publication |
First Author: |
Sansom SN |
Year: |
2009 |
Journal: |
PLoS Genet |
Title: |
The level of the transcription factor Pax6 is essential for controlling the balance between neural stem cell self-renewal and neurogenesis. |
Volume: |
5 |
Issue: |
6 |
Pages: |
e1000511 |
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•
•
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Publication |
First Author: |
Willnow T |
Year: |
2005 |
Journal: |
Organogenesis |
Title: |
The European renal genome project: an integrated approach towards understanding the genetics of kidney development and disease. |
Volume: |
2 |
Issue: |
2 |
Pages: |
42-7 |
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•
•
•
•
•
|
Publication |
First Author: |
Hoffman BG |
Year: |
2008 |
Journal: |
Genome Biol |
Title: |
Identification of transcripts with enriched expression in the developing and adult pancreas. |
Volume: |
9 |
Issue: |
6 |
Pages: |
R99 |
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•
•
•
•
•
|
Publication |
First Author: |
MGI and IMPC |
Year: |
2017 |
Journal: |
MGI Direct Data Submission |
Title: |
MGI Curation of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
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•
•
•
•
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Publication |
First Author: |
Guo G |
Year: |
2010 |
Journal: |
Dev Cell |
Title: |
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. |
Volume: |
18 |
Issue: |
4 |
Pages: |
675-85 |
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•
•
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Publication |
First Author: |
Ko MS |
Year: |
2000 |
Journal: |
Development |
Title: |
Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. |
Volume: |
127 |
Issue: |
8 |
Pages: |
1737-49 |
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•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
Data Curation Using Mouse Genome Assembly |
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•
•
•
•
•
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Publication |
First Author: |
Hansen J |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. |
Volume: |
100 |
Issue: |
17 |
Pages: |
9918-22 |
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•
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Publication |
First Author: |
Gray PA |
Year: |
2004 |
Journal: |
Science |
Title: |
Mouse brain organization revealed through direct genome-scale TF expression analysis. |
Volume: |
306 |
Issue: |
5705 |
Pages: |
2255-7 |
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•
•
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Publication |
First Author: |
Thompson CL |
Year: |
2014 |
Journal: |
Neuron |
Title: |
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. |
Volume: |
83 |
Issue: |
2 |
Pages: |
309-323 |
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•
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Publication |
First Author: |
Stryke D |
Year: |
2003 |
Journal: |
Nucleic Acids Res |
Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
Volume: |
31 |
Issue: |
1 |
Pages: |
278-81 |
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•
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Publication |
First Author: |
Bedogni F |
Year: |
2021 |
Journal: |
Front Mol Neurosci |
Title: |
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
Volume: |
14 |
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Pages: |
686034 |
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•
•
•
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Publication |
First Author: |
International Mouse Strain Resource |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of germline transmission data for alleles from IMSR strain data |
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•
•
•
•
•
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Publication |
First Author: |
GUDMAP Consortium |
Year: |
2004 |
Journal: |
www.gudmap.org |
Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
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•
•
•
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Publication |
First Author: |
Hansen GM |
Year: |
2008 |
Journal: |
Genome Res |
Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
Volume: |
18 |
Issue: |
10 |
Pages: |
1670-9 |
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•
•
•
•
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Publication |
First Author: |
DDB, FB, MGI, GOA, ZFIN curators |
Year: |
2001 |
|
Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
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•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
MGI Sequence Curation Reference |
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•
•
•
•
•
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Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
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•
•
•
•
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Publication |
First Author: |
Kawai J |
Year: |
2001 |
Journal: |
Nature |
Title: |
Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
Issue: |
6821 |
Pages: |
685-90 |
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Publication |
First Author: |
MGD Nomenclature Committee |
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1995 |
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Title: |
Nomenclature Committee Use |
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Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
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14109-14 |
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GemPharmatech |
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Title: |
GemPharmatech Website. |
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
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First Author: |
Cyagen Biosciences Inc. |
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Title: |
Cyagen Biosciences Website. |
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First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
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Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
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First Author: |
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Year: |
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Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
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Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
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Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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Year: |
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PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
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Mouse Genome Informatics Scientific Curators |
Year: |
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Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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First Author: |
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Year: |
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Title: |
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
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Journal: |
Database Release |
Title: |
Entrez Gene Load |
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Allen Institute for Brain Science |
Year: |
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Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
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Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
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Journal: |
Database Download |
Title: |
Consensus CDS project |
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Mouse Genome Informatics Group |
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Journal: |
Database Procedure |
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Automatic Encodes (AutoE) Reference |
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Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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Mouse Genome Informatics |
Year: |
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Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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Publication |
First Author: |
Mathsyaraja H |
Year: |
2021 |
Journal: |
Elife |
Title: |
Loss of MGA repression mediated by an atypical polycomb complex promotes tumor progression and invasiveness. |
Volume: |
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DO Term |
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Publication |
First Author: |
Harmon D |
Year: |
1996 |
Journal: |
Mouse Genome |
Title: |
Polymorphism of Pax7 in the wild mouse gene pool |
Volume: |
94 |
Issue: |
4 |
Pages: |
868-70 |
|
•
•
•
•
•
|
Allele |
Name: |
MAX gene associated; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Conditional ready, No functional change |
|
•
•
•
•
•
|
DO Term |
|
•
•
•
•
•
|
DO Term |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
Mga is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions. It appears to contain two DNA-binding domains that are required for direct activation of the Mga virulence regulon in vivo []. This entry represents the Mga DNA binding domain, which also appears to be found in other regulatory proteins. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
MAX gene-associated protein (MGA) is a dual-specificity transcription factor, acting as a repressor or an activator and binding to 5'-AATTTCACACCTAGGTGTGAAATT-3'. MGA regulates genes targeted by MYC-MAX, suppressing transcriptional activation by MYC and inhibiting MYC-dependent cell transformation. MGA binds DNA via a T-Box []. MGA is a component of the MLL1 complex []. |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This domain can be found in the MAX gene-associated protein (Mga), which is a dual-specificity transcription factor that contains both a bHLHZip domain and a T-box domain and is able to bind to and regulate transcriptional targets through both E-box sites as well as T-box-binding elements (TBEs) []. MAX gene-associated protein (MGA) is a dual-specificity transcription factor, acting as a repressor or an activator and binding to 5'-AATTTCACACCTAGGTGTGAAATT-3'. MGA regulates genes targeted by MYC-MAX, suppressing transcriptional activation by MYC and inhibiting MYC-dependent cell transformation. MGA binds DNA via a T-Box []. MGA is a component of the MLL1 complex []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
Mga is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions []. This region corresponds to the PRD like region. |
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•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE3962 |
Experiment Type: |
transcription profiling by array |
Study Type: |
Baseline |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Publication |
First Author: |
Endoh M |
Year: |
2017 |
Journal: |
Elife |
Title: |
PCGF6-PRC1 suppresses premature differentiation of mouse embryonic stem cells by regulating germ cell-related genes. |
Volume: |
6 |
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•
•
•
•
•
|
Publication |
First Author: |
Quezada-Calvillo R |
Year: |
2002 |
Journal: |
Biochem Biophys Res Commun |
Title: |
Partial characterization of murine intestinal maltase-glucoamylase. |
Volume: |
295 |
Issue: |
2 |
Pages: |
394-400 |
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•
•
•
•
|
Publication |
First Author: |
Boyle MD |
Year: |
1998 |
Journal: |
J Infect Dis |
Title: |
Role of emm and mrp genes in the virulence of group A streptococcal isolate 64/14 in a mouse model of skin infection. |
Volume: |
177 |
Issue: |
4 |
Pages: |
991-7 |
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•
•
•
•
|
Publication |
First Author: |
Hamatani T |
Year: |
2004 |
Journal: |
Dev Cell |
Title: |
Dynamics of global gene expression changes during mouse preimplantation development. |
Volume: |
6 |
Issue: |
1 |
Pages: |
117-31 |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
RNA-Seq |
Study Type: |
WT vs. Mutant |
Source: |
GEO |
|
•
•
•
•
•
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Publication |
First Author: |
Escamilla-Del-Arenal M |
Year: |
2013 |
Journal: |
Mol Cell Biol |
Title: |
Cdyl, a new partner of the inactive X chromosome and potential reader of H3K27me3 and H3K9me2. |
Volume: |
33 |
Issue: |
24 |
Pages: |
5005-20 |
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•
•
•
•
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Publication |
First Author: |
Dahlet T |
Year: |
2021 |
Journal: |
Nat Commun |
Title: |
E2F6 initiates stable epigenetic silencing of germline genes during embryonic development. |
Volume: |
12 |
Issue: |
1 |
Pages: |
3582 |
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•
•
•
•
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Publication |
First Author: |
Suzuki S |
Year: |
2015 |
Journal: |
Development |
Title: |
CHD1 acts via the Hmgpi pathway to regulate mouse early embryogenesis. |
Volume: |
142 |
Issue: |
13 |
Pages: |
2375-84 |
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•
•
•
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Publication |
First Author: |
Potireddy S |
Year: |
2006 |
Journal: |
Dev Biol |
Title: |
Analysis of polysomal mRNA populations of mouse oocytes and zygotes: dynamic changes in maternal mRNA utilization and function. |
Volume: |
298 |
Issue: |
1 |
Pages: |
155-66 |
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•
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Publication |
First Author: |
Trimarchi JM |
Year: |
2002 |
Journal: |
Nat Rev Mol Cell Biol |
Title: |
Sibling rivalry in the E2F family. |
Volume: |
3 |
Issue: |
1 |
Pages: |
11-20 |
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Protein Domain |
Type: |
Family |
Description: |
E2F6 is a member of the E2F family of transcription factors. The E2F proteins contain several evolutionally conserved domains found in most members of the family. These domains include a DNA-binding domain, a dimerisation domain which determines interaction with the differentiation regulated transcription factor proteins (DP), a transactivation domain enriched in acidic amino acids, and a tumour suppressor protein association domain which is embedded within the transactivation domain. E2F6 is atypical because it lacks the transactivation and tumour suppressor protein association domains. It contains a modular suppression domain and is an inhibitor of E2F-dependent transcription. The protein is part of a multimeric protein complex that contains a histone methyltransferase and the transcription factors Mga and Max. Multiple transcript variants encoding several different isoforms have been found for this gene. In general, the E2F family plays a crucial role in the control of cell cycle and action of tumour suppressor proteins and is also a target of the transforming proteins of small DNA tumour viruses [, ]Homo sapiens Mus musculus (Mouse) Macaca fascicularis (Crab eating macaque). |
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Publication |
First Author: |
Davies VJ |
Year: |
2008 |
Journal: |
Brain |
Title: |
A missense mutation in the murine Opa3 gene models human Costeff syndrome. |
Volume: |
131 |
Issue: |
Pt 2 |
Pages: |
368-80 |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
3003
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
3042
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
2833
 |
Fragment?: |
false |
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•
•
•
•
|
Publication |
First Author: |
Dou Y |
Year: |
2005 |
Journal: |
Cell |
Title: |
Physical association and coordinate function of the H3 K4 methyltransferase MLL1 and the H4 K16 acetyltransferase MOF. |
Volume: |
121 |
Issue: |
6 |
Pages: |
873-85 |
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•
•
•
•
•
|
Publication |
First Author: |
Wu CL |
Year: |
1995 |
Journal: |
Mol Cell Biol |
Title: |
In vivo association of E2F and DP family proteins. |
Volume: |
15 |
Issue: |
5 |
Pages: |
2536-46 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
537
 |
Fragment?: |
true |
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
272
 |
Fragment?: |
false |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
272
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
201
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
237
 |
Fragment?: |
false |
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•
•
•
•
|