| Type |
Details |
Score |
| GXD Expression |
| Probe: |
MGI:5299087 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:2826626 |
|
| Stage: |
TS26 |
| Assay Id: |
MGI:5543071 |
| Age: |
embryonic day 17.5 |
| Image: |
GUDMAP:14651 |
|
| Specimen Label: |
GUDMAP:14651 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5299087 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:2826628 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:5543071 |
| Age: |
postnatal day 84 |
| Image: |
GUDMAP:14652 |
|
| Specimen Label: |
GUDMAP:14652 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5299087 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:2772126 |
|
| Stage: |
TS26 |
| Assay Id: |
MGI:5543071 |
| Age: |
embryonic day 17.5 |
| Image: |
GUDMAP:14651 |
|
| Specimen Label: |
GUDMAP:14651 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2018-11-26 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3274820 |
| Pattern: |
Not Specified |
| Stage: |
TS20 |
| Assay Id: |
MGI:6257881 |
| Age: |
embryonic day 12.5 |
| Image: |
4J |
|
| Specimen Label: |
4J |
| Detected: |
true |
| Specimen Num: |
28 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2018-11-26 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1657715 |
| Pattern: |
Not Specified |
| Stage: |
TS15 |
| Assay Id: |
MGI:6257881 |
| Age: |
embryonic day 9.5 |
| Image: |
2D |
|
| Specimen Label: |
2D |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2018-11-26 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1657720 |
| Pattern: |
Not Specified |
| Stage: |
TS20 |
| Assay Id: |
MGI:6257881 |
| Age: |
embryonic day 12.5 |
| Image: |
4E |
|
| Specimen Label: |
4E |
| Detected: |
true |
| Specimen Num: |
23 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2018-11-26 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1657720 |
| Pattern: |
Not Specified |
| Stage: |
TS20 |
| Assay Id: |
MGI:6257881 |
| Age: |
embryonic day 12.5 |
| Image: |
4L |
|
| Specimen Label: |
4L |
| Detected: |
true |
| Specimen Num: |
30 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2018-11-26 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3670720 |
|
| Stage: |
TS20 |
| Assay Id: |
MGI:6257881 |
| Age: |
embryonic day 12.5 |
| Image: |
4J |
|
| Specimen Label: |
4J |
| Detected: |
false |
| Specimen Num: |
28 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2018-11-26 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3779720 |
| Pattern: |
Not Specified |
| Stage: |
TS20 |
| Assay Id: |
MGI:6257881 |
| Age: |
embryonic day 12.5 |
| Image: |
4C |
|
| Specimen Label: |
4C |
| Detected: |
true |
| Specimen Num: |
21 |
|
•
•
•
•
•
|
| Publication |
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Tanaskovic N |
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2022 |
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Life Sci Alliance |
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| Volume: |
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8 |
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J Immunol |
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| Volume: |
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Yoshikawa T |
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•
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| Publication |
| First Author: |
Shanghai Model Organisms Center |
| Year: |
2017 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
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•
•
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•
•
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| First Author: |
Sansom SN |
| Year: |
2009 |
| Journal: |
PLoS Genet |
| Title: |
The level of the transcription factor Pax6 is essential for controlling the balance between neural stem cell self-renewal and neurogenesis. |
| Volume: |
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6 |
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e1000511 |
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•
•
•
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| First Author: |
Willnow T |
| Year: |
2005 |
| Journal: |
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| Title: |
The European renal genome project: an integrated approach towards understanding the genetics of kidney development and disease. |
| Volume: |
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| Issue: |
2 |
| Pages: |
42-7 |
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•
•
•
•
•
|
| Publication |
| First Author: |
Hoffman BG |
| Year: |
2008 |
| Journal: |
Genome Biol |
| Title: |
Identification of transcripts with enriched expression in the developing and adult pancreas. |
| Volume: |
9 |
| Issue: |
6 |
| Pages: |
R99 |
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•
•
•
•
•
|
| Publication |
| First Author: |
MGI and IMPC |
| Year: |
2017 |
| Journal: |
MGI Direct Data Submission |
| Title: |
MGI Curation of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
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•
•
•
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| Publication |
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Guo G |
| Year: |
2010 |
| Journal: |
Dev Cell |
| Title: |
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. |
| Volume: |
18 |
| Issue: |
4 |
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675-85 |
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| First Author: |
Ko MS |
| Year: |
2000 |
| Journal: |
Development |
| Title: |
Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. |
| Volume: |
127 |
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Mouse Genome Informatics Scientific Curators |
| Year: |
2003 |
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| Title: |
Data Curation Using Mouse Genome Assembly |
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Hansen J |
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2003 |
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Proc Natl Acad Sci U S A |
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A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. |
| Volume: |
100 |
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Gray PA |
| Year: |
2004 |
| Journal: |
Science |
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Mouse brain organization revealed through direct genome-scale TF expression analysis. |
| Volume: |
306 |
| Issue: |
5705 |
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2255-7 |
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•
•
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Thompson CL |
| Year: |
2014 |
| Journal: |
Neuron |
| Title: |
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. |
| Volume: |
83 |
| Issue: |
2 |
| Pages: |
309-323 |
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•
•
•
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Stryke D |
| Year: |
2003 |
| Journal: |
Nucleic Acids Res |
| Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
| Volume: |
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Bedogni F |
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2021 |
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Front Mol Neurosci |
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Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
| Volume: |
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International Mouse Strain Resource |
| Year: |
2014 |
| Journal: |
Database Download |
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MGI download of germline transmission data for alleles from IMSR strain data |
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GUDMAP Consortium |
| Year: |
2004 |
| Journal: |
www.gudmap.org |
| Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
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Hansen GM |
| Year: |
2008 |
| Journal: |
Genome Res |
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Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
| Volume: |
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10 |
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1670-9 |
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DDB, FB, MGI, GOA, ZFIN curators |
| Year: |
2001 |
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| Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
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Mouse Genome Informatics Scientific Curators |
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2003 |
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| Title: |
MGI Sequence Curation Reference |
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| Journal: |
Science |
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The transcriptional landscape of the mammalian genome. |
| Volume: |
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Proc Natl Acad Sci U S A |
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Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
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Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
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| Title: |
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Mouse Genome Informatics |
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Mouse Genome Informatics Scientific Curators |
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Mouse Genome Informatics Scientific Curators |
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Database Download |
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| First Author: |
Mathsyaraja H |
| Year: |
2021 |
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Elife |
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Loss of MGA repression mediated by an atypical polycomb complex promotes tumor progression and invasiveness. |
| Volume: |
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| DO Term |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Harmon D |
| Year: |
1996 |
| Journal: |
Mouse Genome |
| Title: |
Polymorphism of Pax7 in the wild mouse gene pool |
| Volume: |
94 |
| Issue: |
4 |
| Pages: |
868-70 |
|
•
•
•
•
•
|
| Allele |
| Name: |
MAX gene associated; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Conditional ready, No functional change |
|
•
•
•
•
•
|
| DO Term |
|
•
•
•
•
•
|
| DO Term |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
Mga is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions. It appears to contain two DNA-binding domains that are required for direct activation of the Mga virulence regulon in vivo []. This entry represents the Mga DNA binding domain, which also appears to be found in other regulatory proteins. |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
MAX gene-associated protein (MGA) is a dual-specificity transcription factor, acting as a repressor or an activator and binding to 5'-AATTTCACACCTAGGTGTGAAATT-3'. MGA regulates genes targeted by MYC-MAX, suppressing transcriptional activation by MYC and inhibiting MYC-dependent cell transformation. MGA binds DNA via a T-Box []. MGA is a component of the MLL1 complex []. |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
This domain can be found in the MAX gene-associated protein (Mga), which is a dual-specificity transcription factor that contains both a bHLHZip domain and a T-box domain and is able to bind to and regulate transcriptional targets through both E-box sites as well as T-box-binding elements (TBEs) []. MAX gene-associated protein (MGA) is a dual-specificity transcription factor, acting as a repressor or an activator and binding to 5'-AATTTCACACCTAGGTGTGAAATT-3'. MGA regulates genes targeted by MYC-MAX, suppressing transcriptional activation by MYC and inhibiting MYC-dependent cell transformation. MGA binds DNA via a T-Box []. MGA is a component of the MLL1 complex []. |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
Mga is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions []. This region corresponds to the PRD like region. |
|
•
•
•
•
•
|
| HT Experiment |
| Series Id: |
GSE3962 |
| Experiment Type: |
transcription profiling by array |
| Study Type: |
Baseline |
| Source: |
ArrayExpress |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Endoh M |
| Year: |
2017 |
| Journal: |
Elife |
| Title: |
PCGF6-PRC1 suppresses premature differentiation of mouse embryonic stem cells by regulating germ cell-related genes. |
| Volume: |
6 |
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Quezada-Calvillo R |
| Year: |
2002 |
| Journal: |
Biochem Biophys Res Commun |
| Title: |
Partial characterization of murine intestinal maltase-glucoamylase. |
| Volume: |
295 |
| Issue: |
2 |
| Pages: |
394-400 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Boyle MD |
| Year: |
1998 |
| Journal: |
J Infect Dis |
| Title: |
Role of emm and mrp genes in the virulence of group A streptococcal isolate 64/14 in a mouse model of skin infection. |
| Volume: |
177 |
| Issue: |
4 |
| Pages: |
991-7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hamatani T |
| Year: |
2004 |
| Journal: |
Dev Cell |
| Title: |
Dynamics of global gene expression changes during mouse preimplantation development. |
| Volume: |
6 |
| Issue: |
1 |
| Pages: |
117-31 |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Escamilla-Del-Arenal M |
| Year: |
2013 |
| Journal: |
Mol Cell Biol |
| Title: |
Cdyl, a new partner of the inactive X chromosome and potential reader of H3K27me3 and H3K9me2. |
| Volume: |
33 |
| Issue: |
24 |
| Pages: |
5005-20 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Dahlet T |
| Year: |
2021 |
| Journal: |
Nat Commun |
| Title: |
E2F6 initiates stable epigenetic silencing of germline genes during embryonic development. |
| Volume: |
12 |
| Issue: |
1 |
| Pages: |
3582 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Suzuki S |
| Year: |
2015 |
| Journal: |
Development |
| Title: |
CHD1 acts via the Hmgpi pathway to regulate mouse early embryogenesis. |
| Volume: |
142 |
| Issue: |
13 |
| Pages: |
2375-84 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Potireddy S |
| Year: |
2006 |
| Journal: |
Dev Biol |
| Title: |
Analysis of polysomal mRNA populations of mouse oocytes and zygotes: dynamic changes in maternal mRNA utilization and function. |
| Volume: |
298 |
| Issue: |
1 |
| Pages: |
155-66 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Trimarchi JM |
| Year: |
2002 |
| Journal: |
Nat Rev Mol Cell Biol |
| Title: |
Sibling rivalry in the E2F family. |
| Volume: |
3 |
| Issue: |
1 |
| Pages: |
11-20 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
E2F6 is a member of the E2F family of transcription factors. The E2F proteins contain several evolutionally conserved domains found in most members of the family. These domains include a DNA-binding domain, a dimerisation domain which determines interaction with the differentiation regulated transcription factor proteins (DP), a transactivation domain enriched in acidic amino acids, and a tumour suppressor protein association domain which is embedded within the transactivation domain. E2F6 is atypical because it lacks the transactivation and tumour suppressor protein association domains. It contains a modular suppression domain and is an inhibitor of E2F-dependent transcription. The protein is part of a multimeric protein complex that contains a histone methyltransferase and the transcription factors Mga and Max. Multiple transcript variants encoding several different isoforms have been found for this gene. In general, the E2F family plays a crucial role in the control of cell cycle and action of tumour suppressor proteins and is also a target of the transforming proteins of small DNA tumour viruses [, ]Homo sapiens Mus musculus (Mouse) Macaca fascicularis (Crab eating macaque). |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Davies VJ |
| Year: |
2008 |
| Journal: |
Brain |
| Title: |
A missense mutation in the murine Opa3 gene models human Costeff syndrome. |
| Volume: |
131 |
| Issue: |
Pt 2 |
| Pages: |
368-80 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
3003
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
3042
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
2833
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Dou Y |
| Year: |
2005 |
| Journal: |
Cell |
| Title: |
Physical association and coordinate function of the H3 K4 methyltransferase MLL1 and the H4 K16 acetyltransferase MOF. |
| Volume: |
121 |
| Issue: |
6 |
| Pages: |
873-85 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wu CL |
| Year: |
1995 |
| Journal: |
Mol Cell Biol |
| Title: |
In vivo association of E2F and DP family proteins. |
| Volume: |
15 |
| Issue: |
5 |
| Pages: |
2536-46 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
537
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
272
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
272
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
201
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
237
 |
| Fragment?: |
false |
|
•
•
•
•
•
|