Type |
Details |
Score |
Publication |
First Author: |
Vicinanza M |
Year: |
2015 |
Journal: |
Mol Cell |
Title: |
PI(5)P regulates autophagosome biogenesis. |
Volume: |
57 |
Issue: |
2 |
Pages: |
219-34 |
|
•
•
•
•
•
|
Publication |
First Author: |
Morioka S |
Year: |
2017 |
Journal: |
Exp Cell Res |
Title: |
Phosphoinositide phosphatase Sac3 regulates the cell surface expression of scavenger receptor A and formation of lipid droplets in macrophages. |
Volume: |
357 |
Issue: |
2 |
Pages: |
252-259 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lenk GM |
Year: |
2014 |
Journal: |
Methods Enzymol |
Title: |
Mouse models of PI(3,5)P2 deficiency with impaired lysosome function. |
Volume: |
534 |
|
Pages: |
245-60 |
|
•
•
•
•
•
|
Publication |
First Author: |
Morishita M |
Year: |
2002 |
Journal: |
Genes Cells |
Title: |
Phosphatidylinositol 3-phosphate 5-kinase is required for the cellular response to nutritional starvation and mating pheromone signals in Schizosaccharomyces pombe. |
Volume: |
7 |
Issue: |
2 |
Pages: |
199-215 |
|
•
•
•
•
•
|
Publication |
First Author: |
Miner GE |
Year: |
2019 |
Journal: |
Mol Biol Cell |
Title: |
Phosphatidylinositol 3,5-bisphosphate regulates the transition between trans-SNARE complex formation and vacuole membrane fusion. |
Volume: |
30 |
Issue: |
2 |
Pages: |
201-208 |
|
•
•
•
•
•
|
Publication |
First Author: |
Whitley P |
Year: |
2009 |
Journal: |
Plant Physiol |
Title: |
Arabidopsis FAB1/PIKfyve proteins are essential for development of viable pollen. |
Volume: |
151 |
Issue: |
4 |
Pages: |
1812-22 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hirano T |
Year: |
2011 |
Journal: |
Plant Signal Behav |
Title: |
Arabidopsis FAB1A/B is possibly involved in the recycling of auxin transporters. |
Volume: |
6 |
Issue: |
4 |
Pages: |
583-5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Er EE |
Year: |
2013 |
Journal: |
Sci Signal |
Title: |
AKT facilitates EGFR trafficking and degradation by phosphorylating and activating PIKfyve. |
Volume: |
6 |
Issue: |
279 |
Pages: |
ra45 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents the C-terminal catalytic lipid kinase domain related to PtdInsP kinases (PIPKc domain) found in PIKfyve and related proteins.1-phosphatidylinositol-3-phosphate 5-kinase (), also called FYVE finger-containing phosphoinositide kinase (PIKfyve), forms a complex with its regulators, the scaffolding protein Vac14 and the lipid phosphatase Fig4. The complex synthesises phosphatidylinositol 3,5-bisphosphate [PtdIns(3,5)P2]through the phosphorylation of phosphatidylinositol 3-phosphate (PtdIns3P or PI3P) on the fifth hydroxyl of the myo-inositol ring. Then phosphatidylinositol-5-phosphate (PtdIns5P) is generated directly from PtdIns(3,5)P2. PtdIns(3,5)P2 and PtdIns5P regulate endosomal trafficking and responses to extracellular stimuli []. It is vital in early embryonic development and plays a role in different pathways, such as receptor tyrosine kinase (RTK) or EGFR degradation, regulation of the glutamate transporters EAAT2, EAAT3 and EAAT4 and the cystic fibrosis transmembrane conductance regulator (CFTR). It is also essential for systemic glucose homeostasis and insulin-regulated glucose uptake/GLUT4 translocation in skeletal muscle [, , ].The yeast orthologue of human PIKfyve, Fab1, is required for endocytic-vacuolar pathway and nuclear migration [, ]. The plant orthologues such as FAB1A-D from Arabidopsis are important for the maintenance of endomembrane homeostasis and for development of viable pollen [, ].PIKfyve and its orthologues share a similar architecture consisting of a N-terminal FYVE domain, a middle region related to the CCT/TCP-1/Cpn60 chaperonins that are involved in productive folding of actin and tubulin, a second middle domain that contains a number of conserved cysteine residues (CCR) unique to these proteins, and a C-terminal catalytic lipid kinase domain related to PtdInsP kinases (or the PIPKc domain). |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus caroli |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus pahari |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus spretus |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang Y |
Year: |
2007 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Loss of Vac14, a regulator of the signaling lipid phosphatidylinositol 3,5-bisphosphate, results in neurodegeneration in mice. |
Volume: |
104 |
Issue: |
44 |
Pages: |
17518-23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bonangelino CJ |
Year: |
2002 |
Journal: |
J Cell Biol |
Title: |
Osmotic stress-induced increase of phosphatidylinositol 3,5-bisphosphate requires Vac14p, an activator of the lipid kinase Fab1p. |
Volume: |
156 |
Issue: |
6 |
Pages: |
1015-28 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1331964 |
Assay Type: |
RT-PCR |
Annotation Date: |
1999-03-18 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1603911 |
|
Stage: |
TS11 |
Assay Id: |
MGI:1331965 |
Age: |
embryonic day 7.5 |
|
|
Specimen Label: |
1x |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1331964 |
Assay Type: |
RT-PCR |
Annotation Date: |
1999-03-18 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1603911 |
|
Stage: |
TS11 |
Assay Id: |
MGI:1331965 |
Age: |
embryonic day 7.5 |
|
|
Specimen Label: |
10x |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1331964 |
Assay Type: |
RT-PCR |
Annotation Date: |
1999-03-18 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1603911 |
|
Stage: |
TS11 |
Assay Id: |
MGI:1331965 |
Age: |
embryonic day 7.5 |
|
|
Specimen Label: |
100x |
Detected: |
false |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1331964 |
Assay Type: |
RT-PCR |
Annotation Date: |
1999-03-18 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1604211 |
|
Stage: |
TS11 |
Assay Id: |
MGI:1331965 |
Age: |
embryonic day 7.5 |
|
|
Specimen Label: |
1x |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1331964 |
Assay Type: |
RT-PCR |
Annotation Date: |
1999-03-18 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1604211 |
|
Stage: |
TS11 |
Assay Id: |
MGI:1331965 |
Age: |
embryonic day 7.5 |
|
|
Specimen Label: |
10x |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1331964 |
Assay Type: |
RT-PCR |
Annotation Date: |
1999-03-18 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1604211 |
|
Stage: |
TS11 |
Assay Id: |
MGI:1331965 |
Age: |
embryonic day 7.5 |
|
|
Specimen Label: |
100x |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:456759 |
Assay Type: |
RNA in situ |
Annotation Date: |
2023-09-18 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271122 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:7526702 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
Supplementary table 2 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:456759 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1603923 |
Pattern: |
Ubiquitous |
Stage: |
TS23 |
Assay Id: |
MGI:4829145 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_007286_11 |
|
Specimen Label: |
euxassay_007286_11 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:456759 |
Assay Type: |
RNA in situ |
Annotation Date: |
2023-09-18 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754722 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:7526702 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
Supplementary table 2 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kim SM |
Year: |
2016 |
Journal: |
J Clin Invest |
Title: |
Targeting cancer metabolism by simultaneously disrupting parallel nutrient access pathways. |
Volume: |
126 |
Issue: |
11 |
Pages: |
4088-4102 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu Y |
Year: |
2013 |
Journal: |
Biochem J |
Title: |
Phosphatidylinositol 3-phosphate 5-kinase (PIKfyve) is an AMPK target participating in contraction-stimulated glucose uptake in skeletal muscle. |
Volume: |
455 |
Issue: |
2 |
Pages: |
195-206 |
|
•
•
•
•
•
|
Publication |
First Author: |
Li X |
Year: |
2015 |
Journal: |
Int Immunol |
Title: |
Mucolipin 1 positively regulates TLR7 responses in dendritic cells by facilitating RNA transportation to lysosomes. |
Volume: |
27 |
Issue: |
2 |
Pages: |
83-94 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yordanov TE |
Year: |
2019 |
Journal: |
Traffic |
Title: |
Biogenesis of lysosome-related organelles complex-1 (BORC) regulates late endosomal/lysosomal size through PIKfyve-dependent phosphatidylinositol-3,5-bisphosphate. |
Volume: |
20 |
Issue: |
9 |
Pages: |
674-696 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ikonomov OC |
Year: |
2009 |
Journal: |
J Biol Chem |
Title: |
Sac3 is an insulin-regulated phosphatidylinositol 3,5-bisphosphate phosphatase: gain in insulin responsiveness through Sac3 down-regulation in adipocytes. |
Volume: |
284 |
Issue: |
36 |
Pages: |
23961-71 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ikonomov OC |
Year: |
2015 |
Journal: |
J Biol Chem |
Title: |
The Protein Complex of Neurodegeneration-related Phosphoinositide Phosphatase Sac3 and ArPIKfyve Binds the Lewy Body-associated Synphilin-1, Preventing Its Aggregation. |
Volume: |
290 |
Issue: |
47 |
Pages: |
28515-29 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gómez NM |
Year: |
2018 |
Journal: |
FASEB J |
Title: |
Robust lysosomal calcium signaling through channel TRPML1 is impaired by lysosomal lipid accumulation. |
Volume: |
32 |
Issue: |
2 |
Pages: |
782-794 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
347
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
142
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
558
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
461
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Fernandez-Mosquera L |
Year: |
2019 |
Journal: |
Autophagy |
Title: |
Mitochondrial respiratory chain deficiency inhibits lysosomal hydrolysis. |
Volume: |
15 |
Issue: |
9 |
Pages: |
1572-1591 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ferguson CJ |
Year: |
2009 |
Journal: |
Hum Mol Genet |
Title: |
Defective autophagy in neurons and astrocytes from mice deficient in PI(3,5)P2. |
Volume: |
18 |
Issue: |
24 |
Pages: |
4868-78 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bronson R |
Year: |
2003 |
Journal: |
MGI Direct Data Submission |
Title: |
Infantile gliosis (ingls) a new spontaneous mutation in the mouse. Mouse Mutant Resources Web Site, The Jackson Laboratory, Bar Harbor, Maine |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Lenk GM |
Year: |
2011 |
Journal: |
PLoS Genet |
Title: |
Pathogenic mechanism of the FIG4 mutation responsible for Charcot-Marie-Tooth disease CMT4J. |
Volume: |
7 |
Issue: |
6 |
Pages: |
e1002104 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang Y |
Year: |
2012 |
Journal: |
EMBO J |
Title: |
Modulation of synaptic function by VAC14, a protein that regulates the phosphoinositides PI(3,5)Pâ‚‚ and PI(5)P. |
Volume: |
31 |
Issue: |
16 |
Pages: |
3442-56 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
782
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
680
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
205
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Li X |
Year: |
2016 |
Journal: |
Nat Cell Biol |
Title: |
A molecular mechanism to regulate lysosome motility for lysosome positioning and tubulation. |
Volume: |
18 |
Issue: |
4 |
Pages: |
404-17 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mayer L |
Year: |
2018 |
Journal: |
Blood |
Title: |
Nbeal2 interacts with Dock7, Sec16a, and Vac14. |
Volume: |
131 |
Issue: |
9 |
Pages: |
1000-1011 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cao M |
Year: |
2014 |
Journal: |
J Neurosci |
Title: |
Upregulation of Parkin in endophilin mutant mice. |
Volume: |
34 |
Issue: |
49 |
Pages: |
16544-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Sequence and Mouse Genome Informatics Scientific Curators |
Year: |
2001 |
|
Title: |
Mouse Genome Sequence Project Annotation |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Ko MS |
Year: |
1998 |
Journal: |
Hum Mol Genet |
Title: |
Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. |
Volume: |
7 |
Issue: |
12 |
Pages: |
1967-78 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Backcross DNA Panel Mapping Resource |
Year: |
1999 |
Journal: |
Database Release |
Title: |
JAX BSS Panel Mapping Data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
MGC Data curation in Mouse Genome Informatics |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
University of California, Davis |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by the University of California, Davis |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Ko MS |
Year: |
2000 |
Journal: |
Development |
Title: |
Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. |
Volume: |
127 |
Issue: |
8 |
Pages: |
1737-49 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Mouse Synonym Curation |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
Data Curation Using Mouse Genome Assembly |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
MGI and IMPC |
Year: |
2018 |
Journal: |
Database Release |
Title: |
MGI Load of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Stryke D |
Year: |
2003 |
Journal: |
Nucleic Acids Res |
Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
Volume: |
31 |
Issue: |
1 |
Pages: |
278-81 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bedogni F |
Year: |
2021 |
Journal: |
Front Mol Neurosci |
Title: |
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
Volume: |
14 |
|
Pages: |
686034 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lennon G |
Year: |
1999 |
Journal: |
Database Download |
Title: |
WashU-HHMI Mouse EST Project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
DDB, FB, MGI, GOA, ZFIN curators |
Year: |
2001 |
|
Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
|
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