| Type |
Details |
Score |
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus pahari |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus spretus |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:2769723 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10163 |
|
| Specimen Label: |
GUDMAP:10163 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:2769723 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10187 |
|
| Specimen Label: |
GUDMAP:10187 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:2853323 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10163 |
|
| Specimen Label: |
GUDMAP:10163 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:2845723 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10163 |
|
| Specimen Label: |
GUDMAP:10163 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:2845723 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10187 |
|
| Specimen Label: |
GUDMAP:10187 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:1795023 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10163 |
|
| Specimen Label: |
GUDMAP:10163 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:1795023 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10187 |
|
| Specimen Label: |
GUDMAP:10187 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:1869223 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10163 |
|
| Specimen Label: |
GUDMAP:10163 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:2854023 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10187 |
|
| Specimen Label: |
GUDMAP:10187 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:2762123 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10163 |
|
| Specimen Label: |
GUDMAP:10163 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:2762123 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10187 |
|
| Specimen Label: |
GUDMAP:10187 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:1797223 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10163 |
|
| Specimen Label: |
GUDMAP:10163 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:1832123 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10163 |
|
| Specimen Label: |
GUDMAP:10163 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:1832123 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10187 |
|
| Specimen Label: |
GUDMAP:10187 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:2851823 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10163 |
|
| Specimen Label: |
GUDMAP:10163 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:2851823 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10187 |
|
| Specimen Label: |
GUDMAP:10187 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:2760523 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10163 |
|
| Specimen Label: |
GUDMAP:10163 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:2760523 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10187 |
|
| Specimen Label: |
GUDMAP:10187 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:2852723 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10163 |
|
| Specimen Label: |
GUDMAP:10163 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:2852723 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10187 |
|
| Specimen Label: |
GUDMAP:10187 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:2874723 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10187 |
|
| Specimen Label: |
GUDMAP:10187 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:2850023 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10163 |
|
| Specimen Label: |
GUDMAP:10163 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:2850023 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10187 |
|
| Specimen Label: |
GUDMAP:10187 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5002079 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:1796223 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5542633 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:10187 |
|
| Specimen Label: |
GUDMAP:10187 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kavarthapu R |
| Year: |
2020 |
| Journal: |
Front Cell Dev Biol |
| Title: |
Linking Phospho-Gonadotropin Regulated Testicular RNA Helicase (GRTH/DDX25) to Histone Ubiquitination and Acetylation Essential for Spermatid Development During Spermiogenesis. |
| Volume: |
8 |
|
| Pages: |
310 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Giannini AL |
| Year: |
2008 |
| Journal: |
Biochem J |
| Title: |
T-cell regulator RNF125/TRAC-1 belongs to a novel family of ubiquitin ligases with zinc fingers and a ubiquitin-binding domain. |
| Volume: |
410 |
| Issue: |
1 |
| Pages: |
101-11 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Rodriguez MS |
| Year: |
2014 |
| Journal: |
Cell Death Dis |
| Title: |
The RING ubiquitin E3 RNF114 interacts with A20 and modulates NF-κB activity and T-cell activation. |
| Volume: |
5 |
|
| Pages: |
e1399 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lee MG |
| Year: |
2014 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
XAF1 directs apoptotic switch of p53 signaling through activation of HIPK2 and ZNF313. |
| Volume: |
111 |
| Issue: |
43 |
| Pages: |
15532-7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Chen HW |
| Year: |
2015 |
| Journal: |
Sci Rep |
| Title: |
Ring finger protein 166 potentiates RNA virus-induced interferon-β production via enhancing the ubiquitination of TRAF3 and TRAF6. |
| Volume: |
5 |
|
| Pages: |
14770 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
This entry includes the C2HC RNF-type zinc finger.Ubiquitination is a post-translational modification that mediates the covalent attachment of ubiquitin (Ub), a small, highly conserved, cytoplasmic protein of 76 amino acid residues, to target proteins. This conjugation is catalyzed by the sequential action of three enzymes: Ub-activating (E1) enzyme, Ub-conjugating (E2) enzyme and Ub ligase (E3). A large number of RING finger (RNF) proteins are present in eukaryotic cells and the majority of them are believed to act as E3 ubiquitin ligases. The closely related proteins RNF125/TRAC-1, RNF114 (also known as Zpf313), RNF138 (or NARF) and RNF166 contain, apart from the RING domain, a C2HC (Cys2-His-Cys)- and two C2H2 (Cys2-His2)-type zinc fingers, as well as an ubiquitin interacting motif (UIM) [, , , ].Some proteins known to contain a C2HC RNF-type zinc finger are listed below:Mammalian RNF125/T-cell RING protein in activation 1 (TRAC-1)/, a positive regulator of T-cell activation. It negatively regulates RIG-1 mediated antiviral activity via conjugating ubiquitin chains to RIG-1 and MDA5, leading to their degradation by the proteasome.Vertebrate RNF114, acts as negative regulator of NF-kappaB-dependent transcription. It interacts with A20 in T cells and modulates A20 ubiquitylation.Vertebrate RNF138, likely involved in regulating homologous recombination repair pathway.Vertebrate RNF166, potentiates the RNA virus-induced production of IFN-beta via enhancing the ubiquitination of TRAF3 and TRAF6. |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
178
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
146
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
179
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
229
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
248
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
233
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
237
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
217
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
233
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
237
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gerhard DS |
| Year: |
2004 |
| Journal: |
Genome Res |
| Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
| Volume: |
14 |
| Issue: |
10B |
| Pages: |
2121-7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
MGD Nomenclature Committee |
| Year: |
1995 |
|
| Title: |
Nomenclature Committee Use |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
| Year: |
2004 |
| Journal: |
Database Release |
| Title: |
Mouse T31 Radiation Hybrid Data Load |
|
|
|
|
•
•
•
•
•
|