Type |
Details |
Score |
Publication |
First Author: |
Moysés-Oliveira M |
Year: |
2019 |
Journal: |
Gene |
Title: |
Search for appropriate reference genes for quantitative reverse transcription PCR studies in somite, prosencephalon and heart of early mouse embryo. |
Volume: |
710 |
|
Pages: |
148-155 |
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•
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Publication |
First Author: |
Delavallée L |
Year: |
2020 |
Journal: |
Mol Metab |
Title: |
Mitochondrial AIF loss causes metabolic reprogramming, caspase-independent cell death blockade, embryonic lethality, and perinatal hydrocephalus. |
Volume: |
40 |
|
Pages: |
101027 |
|
•
•
•
•
•
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Publication |
First Author: |
Sun X |
Year: |
2023 |
Journal: |
Int J Mol Sci |
Title: |
Mitochondrial Methionyl-tRNA Formyltransferase Deficiency Alleviates Metaflammation by Modulating Mitochondrial Activity in Mice. |
Volume: |
24 |
Issue: |
6 |
|
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•
•
•
•
•
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Publication |
First Author: |
Yang H |
Year: |
2010 |
Journal: |
Hum Mol Genet |
Title: |
Analysis of mouse models of cytochrome c oxidase deficiency owing to mutations in Sco2. |
Volume: |
19 |
Issue: |
1 |
Pages: |
170-80 |
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•
•
•
•
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Publication |
First Author: |
Ohanele C |
Year: |
2024 |
Journal: |
Commun Biol |
Title: |
The mitochondrial citrate carrier SLC25A1 regulates metabolic reprogramming and morphogenesis in the developing heart. |
Volume: |
7 |
Issue: |
1 |
Pages: |
1422 |
|
•
•
•
•
•
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Publication |
First Author: |
Forner F |
Year: |
2009 |
Journal: |
Cell Metab |
Title: |
Proteome differences between brown and white fat mitochondria reveal specialized metabolic functions. |
Volume: |
10 |
Issue: |
4 |
Pages: |
324-35 |
|
•
•
•
•
•
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Publication |
First Author: |
Schilling B |
Year: |
2006 |
Journal: |
Biochim Biophys Acta |
Title: |
Proteomic analysis of succinate dehydrogenase and ubiquinol-cytochrome c reductase (Complex II and III) isolated by immunoprecipitation from bovine and mouse heart mitochondria. |
Volume: |
1762 |
Issue: |
2 |
Pages: |
213-22 |
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•
•
•
•
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Publication |
First Author: |
Vrbacký M |
Year: |
2016 |
Journal: |
Hum Mol Genet |
Title: |
Knockout of Tmem70 alters biogenesis of ATP synthase and leads to embryonal lethality in mice. |
Volume: |
25 |
Issue: |
21 |
Pages: |
4674-4685 |
|
•
•
•
•
•
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Publication |
First Author: |
Chen HH |
Year: |
2015 |
Journal: |
J Cell Sci |
Title: |
NRIP is newly identified as a Z-disc protein, activating calmodulin signaling for skeletal muscle contraction and regeneration. |
Volume: |
128 |
Issue: |
22 |
Pages: |
4196-209 |
|
•
•
•
•
•
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Publication |
First Author: |
Baris OR |
Year: |
2011 |
Journal: |
Stem Cells |
Title: |
The mitochondrial electron transport chain is dispensable for proliferation and differentiation of epidermal progenitor cells. |
Volume: |
29 |
Issue: |
9 |
Pages: |
1459-68 |
|
•
•
•
•
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Publication |
First Author: |
Hilse KE |
Year: |
2018 |
Journal: |
Front Physiol |
Title: |
The Expression of Uncoupling Protein 3 Coincides With the Fatty Acid Oxidation Type of Metabolism in Adult Murine Heart. |
Volume: |
9 |
|
Pages: |
747 |
|
•
•
•
•
•
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Publication |
First Author: |
Rastetter RH |
Year: |
2014 |
Journal: |
Dev Biol |
Title: |
Marker genes identify three somatic cell types in the fetal mouse ovary. |
Volume: |
394 |
Issue: |
2 |
Pages: |
242-52 |
|
•
•
•
•
•
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Publication |
First Author: |
Schatton D |
Year: |
2017 |
Journal: |
J Cell Biol |
Title: |
CLUH regulates mitochondrial metabolism by controlling translation and decay of target mRNAs. |
Volume: |
216 |
Issue: |
3 |
Pages: |
675-693 |
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•
•
•
•
•
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Publication |
First Author: |
Beutner G |
Year: |
2024 |
Journal: |
iScience |
Title: |
Coordinated metabolic responses to cyclophilin D deletion in the developing heart. |
Volume: |
27 |
Issue: |
3 |
Pages: |
109157 |
|
•
•
•
•
•
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Publication |
First Author: |
Chen H |
Year: |
2012 |
Journal: |
PLoS One |
Title: |
Identification of novel markers of mouse fetal ovary development. |
Volume: |
7 |
Issue: |
7 |
Pages: |
e41683 |
|
•
•
•
•
•
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Publication |
First Author: |
Chern T |
Year: |
2022 |
Journal: |
Nat Commun |
Title: |
Mutations in Hcfc1 and Ronin result in an inborn error of cobalamin metabolism and ribosomopathy. |
Volume: |
13 |
Issue: |
1 |
Pages: |
134 |
|
•
•
•
•
•
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Publication |
First Author: |
López-Tello J |
Year: |
2019 |
Journal: |
Elife |
Title: |
Fetal and trophoblast PI3K p110α have distinct roles in regulating resource supply to the growing fetus in mice. |
Volume: |
8 |
|
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•
•
•
•
•
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Publication |
First Author: |
An CI |
Year: |
2011 |
Journal: |
BMC Dev Biol |
Title: |
Genome-wide mapping of Sox6 binding sites in skeletal muscle reveals both direct and indirect regulation of muscle terminal differentiation by Sox6. |
Volume: |
11 |
|
Pages: |
59 |
|
•
•
•
•
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Publication |
First Author: |
Ishihara T |
Year: |
2015 |
Journal: |
Mol Cell Biol |
Title: |
Dynamics of mitochondrial DNA nucleoids regulated by mitochondrial fission is essential for maintenance of homogeneously active mitochondria during neonatal heart development. |
Volume: |
35 |
Issue: |
1 |
Pages: |
211-23 |
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•
•
•
•
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Publication |
First Author: |
Lee KY |
Year: |
2015 |
Journal: |
Nat Commun |
Title: |
Tbx15 controls skeletal muscle fibre-type determination and muscle metabolism. |
Volume: |
6 |
|
Pages: |
8054 |
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•
•
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Publication |
First Author: |
Poché RA |
Year: |
2016 |
Journal: |
Cell Rep |
Title: |
RONIN Is an Essential Transcriptional Regulator of Genes Required for Mitochondrial Function in the Developing Retina. |
Volume: |
14 |
Issue: |
7 |
Pages: |
1684-1697 |
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•
•
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Publication |
First Author: |
Ayyangar U |
Year: |
2024 |
Journal: |
EMBO J |
Title: |
Metabolic rewiring of macrophages by epidermal-derived lactate promotes sterile inflammation in the murine skin. |
Volume: |
43 |
Issue: |
7 |
Pages: |
1113-1134 |
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•
•
•
•
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Publication |
First Author: |
Sano M |
Year: |
2007 |
Journal: |
Cell Metab |
Title: |
Ménage-à-trois 1 is critical for the transcriptional function of PPARgamma coactivator 1. |
Volume: |
5 |
Issue: |
2 |
Pages: |
129-42 |
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•
•
•
•
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Publication |
First Author: |
Chong D |
Year: |
2022 |
Journal: |
Cell Discov |
Title: |
Neonatal ketone body elevation regulates postnatal heart development by promoting cardiomyocyte mitochondrial maturation and metabolic reprogramming. |
Volume: |
8 |
Issue: |
1 |
Pages: |
106 |
|
•
•
•
•
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Publication |
First Author: |
Xu L |
Year: |
2024 |
Journal: |
Cell Stem Cell |
Title: |
Context-dependent roles of mitochondrial LONP1 in orchestrating the balance between airway progenitor versus progeny cells. |
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Publication |
First Author: |
Signes A |
Year: |
2018 |
Journal: |
Essays Biochem |
Title: |
Assembly of mammalian oxidative phosphorylation complexes I-V and supercomplexes. |
Volume: |
62 |
Issue: |
3 |
Pages: |
255-270 |
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•
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Publication |
First Author: |
Inoue M |
Year: |
2016 |
Journal: |
Endocrinology |
Title: |
Isolation and Characterization of Fetal Leydig Progenitor Cells of Male Mice. |
Volume: |
157 |
Issue: |
3 |
Pages: |
1222-33 |
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•
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Publication |
First Author: |
Kumar V |
Year: |
2015 |
Journal: |
J Cell Biol |
Title: |
A keratin scaffold regulates epidermal barrier formation, mitochondrial lipid composition, and activity. |
Volume: |
211 |
Issue: |
5 |
Pages: |
1057-75 |
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Publication |
First Author: |
Cankaya M |
Year: |
2007 |
Journal: |
BMC Genomics |
Title: |
An analysis of expression patterns of genes encoding proteins with catalytic activities. |
Volume: |
8 |
|
Pages: |
232 |
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Publication |
First Author: |
Bowman CE |
Year: |
2016 |
Journal: |
Mol Cell Biol |
Title: |
Requirement for the Mitochondrial Pyruvate Carrier in Mammalian Development Revealed by a Hypomorphic Allelic Series. |
Volume: |
36 |
Issue: |
15 |
Pages: |
2089-104 |
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Publication |
First Author: |
Da Cruz S |
Year: |
2003 |
Journal: |
J Biol Chem |
Title: |
Proteomic analysis of the mouse liver mitochondrial inner membrane. |
Volume: |
278 |
Issue: |
42 |
Pages: |
41566-71 |
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Publication |
First Author: |
Wu Y |
Year: |
2016 |
Journal: |
PLoS Genet |
Title: |
Mtu1-Mediated Thiouridine Formation of Mitochondrial tRNAs Is Required for Mitochondrial Translation and Is Involved in Reversible Infantile Liver Injury. |
Volume: |
12 |
Issue: |
9 |
Pages: |
e1006355 |
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Publication |
First Author: |
Bulusu V |
Year: |
2017 |
Journal: |
Dev Cell |
Title: |
Spatiotemporal Analysis of a Glycolytic Activity Gradient Linked to Mouse Embryo Mesoderm Development. |
Volume: |
40 |
Issue: |
4 |
Pages: |
331-341.e4 |
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Publication |
First Author: |
Werner HB |
Year: |
2007 |
Journal: |
J Neurosci |
Title: |
Proteolipid protein is required for transport of sirtuin 2 into CNS myelin. |
Volume: |
27 |
Issue: |
29 |
Pages: |
7717-30 |
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Publication |
First Author: |
Sundberg JP |
Year: |
2017 |
Journal: |
PLoS One |
Title: |
Systematic screening for skin, hair, and nail abnormalities in a large-scale knockout mouse program. |
Volume: |
12 |
Issue: |
7 |
Pages: |
e0180682 |
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Publication |
First Author: |
Mootha VK |
Year: |
2003 |
Journal: |
Cell |
Title: |
Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. |
Volume: |
115 |
Issue: |
5 |
Pages: |
629-40 |
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Publication |
First Author: |
Pagliarini DJ |
Year: |
2008 |
Journal: |
Cell |
Title: |
A mitochondrial protein compendium elucidates complex I disease biology. |
Volume: |
134 |
Issue: |
1 |
Pages: |
112-23 |
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Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
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Title: |
Gene Ontology annotation based on UniPathway vocabulary mapping |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2001 |
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Title: |
RIKEN Data Curation in Mouse Genome Informatics |
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Publication |
First Author: |
Ko MS |
Year: |
2000 |
Journal: |
Development |
Title: |
Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. |
Volume: |
127 |
Issue: |
8 |
Pages: |
1737-49 |
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First Author: |
Dickinson ME |
Year: |
2016 |
Journal: |
Nature |
Title: |
High-throughput discovery of novel developmental phenotypes. |
Volume: |
537 |
Issue: |
7621 |
Pages: |
508-514 |
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First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
Journal: |
Database Download |
Title: |
Integrating Computational Gene Models into the Mouse Genome Informatics (MGI) Database |
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First Author: |
Hansen J |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. |
Volume: |
100 |
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17 |
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Publication |
First Author: |
The Jackson Laboratory |
Year: |
2012 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by The Jackson Laboratory |
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Publication |
First Author: |
Koscielny G |
Year: |
2014 |
Journal: |
Nucleic Acids Res |
Title: |
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. |
Volume: |
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D802-9 |
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First Author: |
Visel A |
Year: |
2004 |
Journal: |
Nucleic Acids Res |
Title: |
GenePaint.org: an atlas of gene expression patterns in the mouse embryo. |
Volume: |
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First Author: |
Stryke D |
Year: |
2003 |
Journal: |
Nucleic Acids Res |
Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
Volume: |
31 |
Issue: |
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Pages: |
278-81 |
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Publication |
First Author: |
Wellcome Trust Sanger Institute |
Year: |
2009 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute |
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First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
Year: |
2014 |
Journal: |
Database Release |
Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
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First Author: |
The Gene Ontology Consortium |
Year: |
2014 |
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Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
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First Author: |
DDB, FB, MGI, GOA, ZFIN curators |
Year: |
2001 |
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Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
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First Author: |
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Year: |
2006 |
Journal: |
PLoS Biol |
Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
Volume: |
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The transcriptional landscape of the mammalian genome. |
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Kawai J |
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Nature |
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Functional annotation of a full-length mouse cDNA collection. |
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First Author: |
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Nature |
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Genetic determinants of micronucleus formation in vivo. |
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Year: |
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Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
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GemPharmatech |
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First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
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Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
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AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
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Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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GOA curators |
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Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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Mouse Genome Informatics Computational Sequence to Gene Associations |
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Mouse Genome Database and National Center for Biotechnology Information |
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Allen Brain Atlas: mouse riboprobes |
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Mouse Genome Informatics Scientific Curators |
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Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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DO Term |
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Allele |
Name: |
transgene insertion 1, Yoshimi Homma |
Allele Type: |
Transgenic |
Attribute String: |
Conditional ready, Inserted expressed sequence, Reporter |
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Allele |
Name: |
transgene insertion LU59, GENSAT Project at Rockefeller University |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
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Strain |
Attribute String: |
mutant strain, coisogenic, transgenic |
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Gene |
Type: |
gene |
Organism: |
human |
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Strain |
Attribute String: |
mutant stock, transgenic |
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Gene |
Type: |
gene |
Organism: |
human |
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Gene |
Type: |
gene |
Organism: |
human |
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DO Term |
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Publication |
First Author: |
Ogura M |
Year: |
2017 |
Journal: |
Eur J Immunol |
Title: |
Mitochondrial reactive oxygen species suppress humoral immune response through reduction of CD19 expression in B cells in mice. |
Volume: |
47 |
Issue: |
2 |
Pages: |
406-418 |
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Protein Domain |
Type: |
Homologous_superfamily |
Description: |
This superfamily includes the highly conserved mitochondrial and bacterial proteins Sdh5/SDHAF2/SdhE.Both yeast and human Sdh5/SDHAF2, which are mitochondrial succinate dehydrogenase assembly factors, interact with the catalytic subunit of the succinate dehydrogenase (SDH) complex, a component of both the electron transport chain and the tricarboxylic acid cycle. Sdh5 is required for SDH-dependent respiration and for Sdh1 flavination (incorporation of the flavin adenine dinucleotide cofactor). Mutational inactivation of Sdh5 confers tumor susceptibility in humans []. Bacterial homologues of Sdh5, termed FAD assembly factor SdhE, are functionally conserved being required for the flavinylation of SdhA and succinate dehydrogenase activity. Like Sdh5, SdhE interacts with SdhA. Furthermore, SdhE was characterised as a FAD co-factor chaperone that directly binds FAD to facilitate the flavinylation of SdhA. Phylogenetic analysis demonstrates that SdhE/Sdh5 proteins evolved only once in an ancestral alpha-proteobacteria prior to the evolution of the mitochondria and now remain in subsequent descendants including eukaryotic mitochondria and the alpha, beta and gamma proteobacteria []. |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
135
 |
Fragment?: |
false |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
164
 |
Fragment?: |
false |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
166
 |
Fragment?: |
false |
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•
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Publication |
First Author: |
Hao HX |
Year: |
2009 |
Journal: |
Science |
Title: |
SDH5, a gene required for flavination of succinate dehydrogenase, is mutated in paraganglioma. |
Volume: |
325 |
Issue: |
5944 |
Pages: |
1139-42 |
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•
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Publication |
First Author: |
McNeil MB |
Year: |
2012 |
Journal: |
J Biol Chem |
Title: |
SdhE is a conserved protein required for flavinylation of succinate dehydrogenase in bacteria. |
Volume: |
287 |
Issue: |
22 |
Pages: |
18418-28 |
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Protein Domain |
Type: |
Family |
Description: |
This family includes the highly conserved mitochondrial and bacterial proteins Sdh5/SDHAF2/SdhE.Both yeast and human Sdh5/SDHAF2 interact with the catalytic subunit of the succinate dehydrogenase (SDH) complex, a component of both the electron transport chain and the tricarboxylic acid cycle. Sdh5 is required for SDH-dependent respiration and for Sdh1 flavination (incorporation of the flavin adenine dinucleotide cofactor). Mutational inactivation of Sdh5 confers tumor susceptibility in humans []. Bacterial homologues of Sdh5, termed SdhE, are functionally conserved being required for the flavinylation of SdhA and succinate dehydrogenase activity. Like Sdh5, SdhE interacts with SdhA. Furthermore, SdhE was characterised as a FAD co-factor chaperone that directly binds FAD to facilitate the flavinylation of SdhA. Phylogenetic analysis demonstrates that SdhE/Sdh5 proteins evolved only once in an ancestral alpha-proteobacteria prior to the evolution of the mitochondria and now remain in subsequent descendants including eukaryotic mitochondria and the alpha, beta and gamma proteobacteria [].This family was previously annotated in Pfam as being a divergent TPR repeat but structural evidence has indicated this is not true. |
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Publication |
First Author: |
Lin H |
Year: |
2017 |
Journal: |
Dis Model Mech |
Title: |
Early cerebellar deficits in mitochondrial biogenesis and respiratory chain complexes in the KIKO mouse model of Friedreich ataxia. |
Volume: |
10 |
Issue: |
11 |
Pages: |
1343-1352 |
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Publication |
First Author: |
Verma M |
Year: |
2017 |
Journal: |
Brain Behav Immun |
Title: |
11β-hydroxysteroid dehydrogenase-1 deficiency alters brain energy metabolism in acute systemic inflammation. |
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Publication |
First Author: |
Sun Z |
Year: |
2020 |
Journal: |
Neuroscience |
Title: |
Characterization of Age-dependent Behavior Deficits in the PGC-1α Knockout Mouse, in Relevance to the Parkinson's Disease Model. |
Volume: |
440 |
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Pages: |
39-47 |
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