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Search results 301 to 362 out of 362 for Sem1

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Type Details Score
Publication
- | J:104881
     
First Author: The RIKEN BioResource Center
Year: 2006
Journal: Unpublished
Title: Information obtained from The RIKEN BioResource Center
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Publication
- | J:46439
     
First Author: Freeman TC
Year: 1998
Journal: MGI Direct Data Submission
Title: Expression Mapping of Mouse Genes
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Publication
- | J:77000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: MGC Data curation in Mouse Genome Informatics
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Publication
15226823 | J:93300
First Author: Blackshaw S
Year: 2004
Journal: PLoS Biol
Title: Genomic analysis of mouse retinal development.
Volume: 2
Issue: 9
Pages: E247
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Publication
12904583 | J:85162
First Author: Hansen J
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
Volume: 100
Issue: 17
Pages: 9918-22
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Publication
14681479 | J:122989
First Author: Visel A
Year: 2004
Journal: Nucleic Acids Res
Title: GenePaint.org: an atlas of gene expression patterns in the mouse embryo.
Volume: 32
Issue: Database issue
Pages: D552-6
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Publication
12520002 | J:91812
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
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Publication
- | J:204812
     
First Author: International Mouse Strain Resource
Year: 2014
Journal: Database Download
Title: MGI download of germline transmission data for alleles from IMSR strain data
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
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Publication
- | J:72247
       
First Author: DDB, FB, MGI, GOA, ZFIN curators
Year: 2001
Title: Gene Ontology annotation through association of InterPro records with GO terms
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Gene
607599 | LOC607599
Type: gene
Organism: dog, domestic
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Gene
101907965 | LOC101907965
Type: gene
Organism: cattle
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Protein
P60897
Organism: Mus musculus/domesticus
Length: 70  
Fragment?: false
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UniProt Feature
UniProt Feature
Begin: 1
Description: 26S proteasome complex subunit SEM1
Type: chain
End: 70
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Gene
108718846 | sem1.L
Type: gene
Organism: frog, African clawed
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Gene
447126 | sem1.S
Type: gene
Organism: frog, African clawed
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Publication
23643786 | -
First Author: Bohn S
Year: 2013
Journal: Biochem Biophys Res Commun
Title: Localization of the regulatory particle subunit Sem1 in the 26S proteasome.
Volume: 435
Issue: 2
Pages: 250-4
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Publication
19289793 | -
First Author: Faza MB
Year: 2009
Journal: J Cell Biol
Title: Sem1 is a functional component of the nuclear pore complex-associated messenger RNA export machinery.
Volume: 184
Issue: 6
Pages: 833-46
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Publication
24412063 | -
First Author: Tomko RJ Jr
Year: 2014
Journal: Mol Cell
Title: The intrinsically disordered Sem1 protein functions as a molecular tether during proteasome lid biogenesis.
Volume: 53
Issue: 3
Pages: 433-43
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UniProt Feature
UniProt Feature
Begin: 2603
Description: Nuclear export signal; masked by interaction with SEM1
Type: short sequence motif
End: 2619
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Publication
12411502 | -
First Author: Fischer T
Year: 2002
Journal: EMBO J
Title: The mRNA export machinery requires the novel Sac3p-Thp1p complex to dock at the nucleoplasmic entrance of the nuclear pores.
Volume: 21
Issue: 21
Pages: 5843-52
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Publication
12702719 | -
First Author: Gallardo M
Year: 2003
Journal: J Biol Chem
Title: Nab2p and the Thp1p-Sac3p complex functionally interact at the interface between transcription and mRNA metabolism.
Volume: 278
Issue: 26
Pages: 24225-32
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Publication
25294824 | -
First Author: Santos-Pereira JM
Year: 2014
Journal: Nucleic Acids Res
Title: A genome-wide function of THSC/TREX-2 at active genes prevents transcription-replication collisions.
Volume: 42
Issue: 19
Pages: 12000-14
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Protein Domain
IPR017173 | Sac3
Type: Family
Description: This entry represents a mRNA export factor Sac3 from budding yeasts. Sac3 is a component of the TREX-2 complex (Sac3p-Thp1p-Sus1p-Cdc31p), which functions in transcription elongation and transcription-coupled mRNA export from the nucleus to the cytoplasm [, , ]. Its N terminus associates with Thp1 and Sem1 to form an mRNA-binding module, as well as with the export receptor Mex67, its C terminus interacts with Sus1, Cdc31 and the Nup1 nucleoporin, providing anchoring to the nuclear pore complex [].
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Protein
Q3TV35
Organism: Mus musculus/domesticus
Length: 70  
Fragment?: false
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Publication
8782053 | -
First Author: Ignatius J
Year: 1996
Journal: J Med Genet
Title: Split hand/split foot malformation, deafness, and mental retardation with a complex cytogenetic rearrangement involving 7q21.3.
Volume: 33
Issue: 6
Pages: 507-10
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Publication
15117943 | -
First Author: Sone T
Year: 2004
Journal: J Biol Chem
Title: Sem1p is a novel subunit of the 26 S proteasome from Saccharomyces cerevisiae.
Volume: 279
Issue: 27
Pages: 28807-16
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Publication
26944332 | -
First Author: Kragelund BB
Year: 2016
Journal: Trends Biochem Sci
Title: DSS1/Sem1, a Multifunctional and Intrinsically Disordered Protein.
Volume: 41
Issue: 5
Pages: 446-59
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Protein Domain
IPR007834 | DSS1_SEM1
Type: Family
Description: This family includes yeast Sem1 and its mammalian homologue, DSS1.Sem1/DSS1 (also known as rpn15) is a component of lid subcomplex of 26S proteasome regulatory subunit [, , ]. Besides being a subunit of the 26S proteasome, Sem1/DSS1 associates with other protein complexes []. It is a component of the nuclear pore complex (NPC)-associated TREX-2 complex that is required for transcription-coupled mRNA export, and the COP9 signalosome, which is involved in deneddylation [, , ]. Loss of DSS1 in humans has been associated with split hand/split foot malformations [].
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Publication
26456823 | -
First Author: Rozen S
Year: 2015
Journal: Cell Rep
Title: CSNAP Is a Stoichiometric Subunit of the COP9 Signalosome.
Volume: 13
Issue: 3
Pages: 585-598
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Publication
18667528 | -
First Author: González-Aguilera C
Year: 2008
Journal: Mol Biol Cell
Title: The THP1-SAC3-SUS1-CDC31 complex works in transcription elongation-mRNA export preventing RNA-mediated genome instability.
Volume: 19
Issue: 10
Pages: 4310-8
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Publication
25631053 | -
First Author: Hu Y
Year: 2015
Journal: J Biol Chem
Title: Solution structure of yeast Rpn9: insights into proteasome lid assembly.
Volume: 290
Issue: 11
Pages: 6878-89
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Protein Domain
IPR040798 | Rpn9_C
Type: Domain
Description: The 26S proteasome is the major ATP-dependent protease in eukaryotes which plays a key role in intracellular protein degradation [, ].The lid of the 26S proteasome contains six PCI-domain-containing proteins (Rpn3/5/6/7/9/12), two MPN-domain-containing proteins (Rpn8/11), and one peptide, Sem1 []. The only catalytically active member of the lid is Rpn11, which serves as the essential deubiquitinase of the proteasome []. The C terminus of each subunit in the lid is predicted to form one or more helices. These C-terminal helices are highly conserved and have been predicted to form a helical bundle structure [].In yeast, Rpn9 was found to be necessary for the integrity and efficiency of the 26S proteasome [, ].This entry represents a helix domain C-terminal to the PCI domain found in Rpn9, a subunit of the 26S proteasome. C-terminal truncations of Rpn5 or Rpn9 have been shown not to cause any major lid assembly defects but to prevent the association of Rpn12 [, ].
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Publication
24896180 | -
First Author: Bhatia V
Year: 2014
Journal: Nature
Title: BRCA2 prevents R-loop accumulation and associates with TREX-2 mRNA export factor PCID2.
Volume: 511
Issue: 7509
Pages: 362-5
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Publication
20471955 | -
First Author: Fukunaga K
Year: 2010
Journal: Biochem Biophys Res Commun
Title: Dissection of the assembly pathway of the proteasome lid in Saccharomyces cerevisiae.
Volume: 396
Issue: 4
Pages: 1048-53
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Publication
23911091 | -
First Author: Estrin E
Year: 2013
Journal: Structure
Title: Formation of an intricate helical bundle dictates the assembly of the 26S proteasome lid.
Volume: 21
Issue: 9
Pages: 1624-35
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Publication
27342858 | -
First Author: Schweitzer A
Year: 2016
Journal: Proc Natl Acad Sci U S A
Title: Structure of the human 26S proteasome at a resolution of 3.9 Å.
Volume: 113
Issue: 28
Pages: 7816-21
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Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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