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Search results 301 to 400 out of 411 for Smc3

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Type Details Score
Publication
- | J:238766
     
First Author: Shanghai Model Organisms Center
Year: 2017
Journal: MGI Direct Data Submission
Title: Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China
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Publication
- | J:175295
     
First Author: Mouse Genome Informatics and the Wellcome Trust Sanger Institute Mouse Genetics Project (MGP)
Year: 2011
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the Wellcome Trust Sanger Institute (WTSI) Mouse Resources Portal
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Publication
30973865 | J:274872
First Author: Ingham NJ
Year: 2019
Journal: PLoS Biol
Title: Mouse screen reveals multiple new genes underlying mouse and human hearing loss.
Volume: 17
Issue: 4
Pages: e3000194
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Publication
- | J:94790
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Mouse Synonym Curation
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Publication
12904583 | J:85162
First Author: Hansen J
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
Volume: 100
Issue: 17
Pages: 9918-22
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Publication
14681479 | J:122989
First Author: Visel A
Year: 2004
Journal: Nucleic Acids Res
Title: GenePaint.org: an atlas of gene expression patterns in the mouse embryo.
Volume: 32
Issue: Database issue
Pages: D552-6
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Publication
12520002 | J:91812
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
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Publication
- | J:136110
     
First Author: Velocigene
Year: 2008
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals)
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Publication
- | J:204812
     
First Author: International Mouse Strain Resource
Year: 2014
Journal: Database Download
Title: MGI download of germline transmission data for alleles from IMSR strain data
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Publication
- | J:155845
     
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
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Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
- | J:155856
       
First Author: The Gene Ontology Consortium
Year: 2014
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs
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Publication
- | J:342604
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
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Publication
- | J:72247
       
First Author: DDB, FB, MGI, GOA, ZFIN curators
Year: 2001
Title: Gene Ontology annotation through association of InterPro records with GO terms
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Publication
16602821 | J:162220
First Author: Magdaleno S
Year: 2006
Journal: PLoS Biol
Title: BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Volume: 4
Issue: 4
Pages: e86
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
38355793 | J:345621
First Author: Adams DJ
Year: 2024
Journal: Nature
Title: Genetic determinants of micronucleus formation in vivo.
Volume: 627
Issue: 8002
Pages: 130-136
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:60000
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Allele
Smc3<tm1.1Toshi> | MGI:7384685
Name: structural maintenance of chromosomes 3; targeted mutation 1.1, Toshihide Yamashita
Allele Type: Targeted
Attribute String: Conditional ready
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Allele
Smc3<em2Smoc> | MGI:7292479
Name: structural maintenance of chromosomes 3; endonuclease-mediated mutation 2, Shanghai Model Organisms Center
Allele Type: Endonuclease-mediated
Attribute String: Null/knockout
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Interaction Experiment
Ding C (2011)
Description: Quantitative analysis of cohesin complex stoichiometry and SMC3 modification-dependent protein interactions.
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Publication
18996922 | -
First Author: Revenkova E
Year: 2009
Journal: Hum Mol Genet
Title: Cornelia de Lange syndrome mutations in SMC1A or SMC3 affect binding to DNA.
Volume: 18
Issue: 3
Pages: 418-27
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Allele
Smc3<tm1.2Toshi> | MGI:7384686
Name: structural maintenance of chromosomes 3; targeted mutation 1.2, Toshihide Yamashita
Allele Type: Targeted
Attribute String: Null/knockout
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Genotype
Genotype
Symbol: Smc3/Smc3<+>
Background: B6.Cg-Smc3
Zygosity: ht
Has Mutant Allele: true
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DO Term
DOID:0080507 | Cornelia de Lange syndrome 3
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Publication
23106691 | -
First Author: Gimigliano A
Year: 2012
Journal: J Proteome Res
Title: Proteomic profile identifies dysregulated pathways in Cornelia de Lange syndrome cells with distinct mutations in SMC1A and SMC3 genes.
Volume: 11
Issue: 12
Pages: 6111-23
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Strain
MGI:7623491 | C57BL/6JSmoc-Smc3<em2Smoc>/Smoc
Attribute String: coisogenic, endonuclease-mediated mutation, mutant strain
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Publication
21699228 | -
First Author: Ding C
Year: 2011
Journal: J Proteome Res
Title: Quantitative analysis of cohesin complex stoichiometry and SMC3 modification-dependent protein interactions.
Volume: 10
Issue: 8
Pages: 3652-9
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Allele
Smc3<em1Smoc> | MGI:7292478
Name: structural maintenance of chromosomes 3; endonuclease-mediated mutation 1, Shanghai Model Organisms Center
Allele Type: Endonuclease-mediated
Attribute String: Conditional ready, No functional change
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Protein
Q6NZK5
Organism: Mus musculus/domesticus
Length: 612  
Fragment?: false
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Protein
E0CYF6
Organism: Mus musculus/domesticus
Length: 80  
Fragment?: false
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Protein
E9QAK8
Organism: Mus musculus/domesticus
Length: 612  
Fragment?: false
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Protein
E9QPX6
Organism: Mus musculus/domesticus
Length: 579  
Fragment?: false
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Publication
15656913 | -
First Author: Patel CA
Year: 2005
Journal: BMC Cell Biol
Title: Hinderin, a five-domains protein including coiled-coil motifs that binds to SMC3.
Volume: 6
Issue: 1
Pages: 3
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Protein Domain
IPR032736 | Hinderin
Type: Family
Description: Protein hinderin shares structural similarity to the SMC family members. It interacts with SMC3 and may affect the availability of SMC3 to engage in the formation of multimeric protein complexes [].
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Strain
MGI:6476341 | C57BL/6JSmoc-Smc3<em1Smoc>/Smoc
Attribute String: coisogenic, endonuclease-mediated mutation, mutant strain
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Genotype
Genotype
Symbol: Smc3/Smc3
Background: involves: C57BL/6J
Zygosity: hm
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Nkx2-5/Nkx2-5<+> Smc3/Smc3<+>
Background: involves: C57BL/6J
Zygosity: cn
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Nkx2-5/Nkx2-5<+> Smc3/Smc3
Background: involves: C57BL/6J
Zygosity: cn
Has Mutant Allele: true
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Publication
23395900 | -
First Author: Chatterjee A
Year: 2013
Journal: EMBO J
Title: Structural insights into the regulation of cohesion establishment by Wpl1.
Volume: 32
Issue: 5
Pages: 677-87
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Protein Domain
IPR031550 | Rad61_Wapl
Type: Domain
Description: The Wapl domain is found at the C terminus of fungal Wpl1 proteins (also known as Rad61), which are subunits of a complex that inhibits sister chromatid cohesion. The Wapl domain binds to the ATPase domain of cohesin subunit Smc3 [].
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Protein Domain
IPR038496 | Rad61_Wapl_sf
Type: Homologous_superfamily
Description: The Wapl domain is found at the C terminus of fungal Wpl1 proteins (also known as Rad61), which are subunits of a complex that inhibits sister chromatid cohesion. The Wapl domain binds to the ATPase domain of cohesin subunit Smc3 [].
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GO Term
GO:0008278 | cohesin complex
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Protein
Q69Z69
Organism: Mus musculus/domesticus
Length: 843  
Fragment?: false
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Protein
Q3ULS5
Organism: Mus musculus/domesticus
Length: 843  
Fragment?: false
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Protein
Q3UKT9
Organism: Mus musculus/domesticus
Length: 344  
Fragment?: false
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Publication
15958495 | -
First Author: Hou F
Year: 2005
Journal: Mol Biol Cell
Title: Two human orthologues of Eco1/Ctf7 acetyltransferases are both required for proper sister-chromatid cohesion.
Volume: 16
Issue: 8
Pages: 3908-18
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Publication
19907496 | -
First Author: Terret ME
Year: 2009
Journal: Nature
Title: Cohesin acetylation speeds the replication fork.
Volume: 462
Issue: 7270
Pages: 231-4
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Protein Domain
IPR028009 | ESCO_Acetyltransf_dom
Type: Domain
Description: This entry represents the acetyl-transferase domain of the acetyl-transferase ESCO. N-acetyltransferase ESCO1 and ESCO2 are required for the establishment of sister chromatid cohesion and couple the processes of cohesion and DNA replication to ensure that only sister chromatids become paired together. They act by mediating the acetylation of cohesin component SMC3 []. They feature a conserved C-terminal domain consisting of a H2C2 zinc finger motif () and an acetyltransferase domain, while the diverse N-terminal domain is involved in chromosome binding and could target these proteins to different chromosome structures [].
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Protein Domain
IPR028005 | AcTrfase_ESCO_Znf_dom
Type: Domain
Description: This entry represents the zinc-inger domain of the acetyl-transferase ESCO. N-acetyltransferase ESCO1 and ESCO2 are required for the establishment of sister chromatid cohesion and couple the processes of cohesion and DNA replication to ensure that only sister chromatids become paired together. They act by mediating the acetylation of cohesin component SMC3 []. They feature a conserved C-terminal domain consisting of a H2C2 zinc finger motif and an acetyltransferase domain (), while the diverse N-terminal domain is involved in chromosome binding and could target these proteins to different chromosome structures [].
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Protein Domain
IPR026656 | AcTrfase_ESCO1
Type: Family
Description: N-acetyltransferase ESCO1 (also known as ECO1/EFO1) and ESCO2 are required for the establishment of sister chromatid cohesion and couple the processes of cohesion and DNA replication to ensure that only sister chromatids become paired together. They act by mediating the acetylation of cohesin component SMC3 []. They feature a conserved C-terminal domain consisting of a H2C2 zinc finger motif () and an acetyltransferase domain (), while the diverse N-terminal domain is involved in chromosome binding and could target these proteins to different chromosome structures [].This entry represents ESCO1.
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Protein
Q8CIB9
Organism: Mus musculus/domesticus
Length: 592  
Fragment?: false
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Protein
A0A3Q4EGN2
Organism: Mus musculus/domesticus
Length: 217  
Fragment?: false
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Publication
22614755 | J:197587
First Author: Whelan G
Year: 2012
Journal: Nucleus
Title: The non-redundant function of cohesin acetyltransferase Esco2: some answers and new questions.
Volume: 3
Issue: 4
Pages: 330-4
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Publication
24141881 | J:205601
First Author: Carretero M
Year: 2013
Journal: EMBO J
Title: Pds5B is required for cohesion establishment and Aurora B accumulation at centromeres.
Volume: 32
Issue: 22
Pages: 2938-49
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Protein Domain
IPR041741 | SMC3_ABC_euk
Type: Domain
Description: The structural maintenance of chromosomes (SMC) proteins are large (approximately 110 to 170kDa), and each is arranged into five recognizable domains. Amino-acid sequence homology of SMC proteins between species is largely confined to the amino- and carboxy-terminal globular domains. The amino-terminal domain contains a 'WalkerA' nucleotide-binding domain (GxxGxGKS/T), which by mutational studies has been shown to be essential in several proteins. The carboxy-terminal domain contains a sequence (the DA-box) that resembles a 'Walker B' motif, and a motif with homology to the signature sequence of the ATP-binding cassette (ABC) family of ATPases. The sequence homology within the carboxy-terminal domain is relatively high within the SMC1-SMC4 group, whereas SMC5 and SMC6 show some divergence in both of these sequences. In eukaryotic cells, the proteins are found as heterodimers of SMC1 paired with SMC3, SMC2 with SMC4, and SMC5 with SMC6 [].This entry represents the ATP-binding cassette domain of eukaryotic SMC3 proteins, which is found at the N terminus.
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Publication
22615490 | J:186652
First Author: Gonzales ML
Year: 2012
Journal: Mol Cell Biol
Title: Phosphorylation of distinct sites in MeCP2 modifies cofactor associations and the dynamics of transcriptional regulation.
Volume: 32
Issue: 14
Pages: 2894-903
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Publication
32051254 | J:286226
 
First Author: McNicoll F
Year: 2020
Journal: Life Sci Alliance
Title: Meiotic sex chromosome cohesion and autosomal synapsis are supported by Esco2.
Volume: 3
Issue: 3
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Publication
29636874 | J:263972
First Author: Hu YJ
Year: 2018
Journal: Am J Transl Res
Title: Renal proteomic analysis of RGC-32 knockout mice reveals the potential mechanism of RGC-32 in regulating cell cycle.
Volume: 10
Issue: 3
Pages: 847-856
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Publication
35536551 | J:334012
First Author: Cheng J
Year: 2022
Journal: Cell Cycle
Title: Knockout of cyclin B1 in granulosa cells causes female subfertility.
Volume: 21
Issue: 17
Pages: 1867-1878
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Publication
11877377 | -
First Author: Yazdi PT
Year: 2002
Journal: Genes Dev
Title: SMC1 is a downstream effector in the ATM/NBS1 branch of the human S-phase checkpoint.
Volume: 16
Issue: 5
Pages: 571-82
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Publication
24756084 | -
First Author: Parenti I
Year: 2014
Journal: Epigenetics
Title: Overall and allele-specific expression of the SMC1A gene in female Cornelia de Lange syndrome patients and healthy controls.
Volume: 9
Issue: 7
Pages: 973-9
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Publication
22885700 | -
First Author: Deardorff MA
Year: 2012
Journal: Nature
Title: HDAC8 mutations in Cornelia de Lange syndrome affect the cohesin acetylation cycle.
Volume: 489
Issue: 7415
Pages: 313-7
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Publication
8392064 | -
First Author: Jessberger R
Year: 1993
Journal: J Biol Chem
Title: A mammalian protein complex that repairs double-strand breaks and deletions by recombination.
Volume: 268
Issue: 20
Pages: 15070-9
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Publication
28301465 | -
First Author: Chao LF
Year: 2017
Journal: PLoS Genet
Title: An SMC-like protein binds and regulates Caenorhabditis elegans condensins.
Volume: 13
Issue: 3
Pages: e1006614
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Protein Domain
IPR029683 | SMC1A_metazoan
Type: Family
Description: Structural maintenance of chromosomes protein 1A (SMC1A) is a homologue of the yeast Smc1 protein, which is a component of the cohesin complex required for sister chromatid cohesion []. In human, it is part of the core cohesion complex composed of SMC1A, SMC3, RAD21 and STAG proteins []. These proteins form a ring structure that encircles sister chromatids to mediate sister chromatid cohesion []. SMC1A binds to SMC3 through its hinge domain []. Besides sister chromatid cohesion function, SMC1A-SMC3 heterodimer can also found in the RC-1 complex, a mammalian protein complex that promotes repair of DNA gaps and deletions through recombination [, ]. This entry also includes Smc1 homologue from Caenorhabditis elegans, SMCL-1. Unlike canonical SMC proteins, SMCL-1 lacks hinge and coil domains, and its ATPase domain lacks conserved amino acids required for ATP hydrolysis []. Mutations in SMC1A gene cause Cornelia de Lange syndrome 2 (CDLS2), which is a form of Cornelia de Lange syndrome, a clinically heterogeneous developmental disorder associated with malformations affecting multiple systems [, ].
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Protein Coding Gene
MGI:1098658 | Stag1
Type: protein_coding_gene
Organism: mouse, laboratory
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Publication
30620721 | J:285736
First Author: Singh VP
Year: 2019
Journal: Reproduction
Title: Oocyte-specific deletion of Hdac8 in mice reveals stage-specific effects on fertility.
Volume: 157
Issue: 3
Pages: 305-316
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Protein
Q3TPG9
Organism: Mus musculus/domesticus
Length: 353  
Fragment?: true
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Protein
Q3US85
Organism: Mus musculus/domesticus
Length: 284  
Fragment?: true
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Protein
Q3TMK9
Organism: Mus musculus/domesticus
Length: 171  
Fragment?: true
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•
•
•
•
Protein Coding Gene
MGI:1098583 | Stag2
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGI:1344345 | Smc1a
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein
Q6A0B0
Organism: Mus musculus/domesticus
Length: 236  
Fragment?: true
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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