Type |
Details |
Score |
Publication |
First Author: |
Mariani NAP |
Year: |
2020 |
Journal: |
Mol Cell Endocrinol |
Title: |
Epididymal protease inhibitor (EPPIN) is a protein hub for seminal vesicle-secreted protein SVS2 binding in mouse spermatozoa. |
Volume: |
506 |
|
Pages: |
110754 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Publication |
First Author: |
Chiesa G |
Year: |
1992 |
Journal: |
J Biol Chem |
Title: |
Reconstitution of lipoprotein(a) by infusion of human low density lipoprotein into transgenic mice expressing human apolipoprotein(a). |
Volume: |
267 |
Issue: |
34 |
Pages: |
24369-74 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lawn RM |
Year: |
1992 |
Journal: |
Nature |
Title: |
Atherogenesis in transgenic mice expressing human apolipoprotein(a) |
Volume: |
360 |
Issue: |
6405 |
Pages: |
670-2 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lawn RM |
Year: |
1996 |
Journal: |
J Biol Chem |
Title: |
Feedback mechanism of focal vascular lesion formation in transgenic apolipoprotein(a) mice. |
Volume: |
271 |
Issue: |
49 |
Pages: |
31367-71 |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion IF181, GENSAT Project at Rockefeller University |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Publication |
First Author: |
Esquivel RN |
Year: |
2019 |
Journal: |
Mol Ther |
Title: |
In Vivo Delivery of a DNA-Encoded Monoclonal Antibody Protects Non-human Primates against Zika Virus. |
Volume: |
27 |
Issue: |
5 |
Pages: |
974-985 |
|
•
•
•
•
•
|
Publication |
First Author: |
Parzych EM |
Year: |
2022 |
Journal: |
Nat Commun |
Title: |
DNA-delivered antibody cocktail exhibits improved pharmacokinetics and confers prophylactic protection against SARS-CoV-2. |
Volume: |
13 |
Issue: |
1 |
Pages: |
5886 |
|
•
•
•
•
•
|
Publication |
First Author: |
Konrath KM |
Year: |
2022 |
Journal: |
Cell Rep |
Title: |
Nucleic acid delivery of immune-focused SARS-CoV-2 nanoparticles drives rapid and potent immunogenicity capable of single-dose protection. |
Volume: |
38 |
Issue: |
5 |
Pages: |
110318 |
|
•
•
•
•
•
|
Strain |
Attribute String: |
mutant stock, transgenic |
|
•
•
•
•
•
|
Publication |
First Author: |
Lou XJ |
Year: |
1998 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Fibrinogen deficiency reduces vascular accumulation of apolipoprotein(a) and development of atherosclerosis in apolipoprotein(a) transgenic mice. |
Volume: |
95 |
Issue: |
21 |
Pages: |
12591-5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Oh YS |
Year: |
1987 |
Journal: |
Jikken Dobutsu |
Title: |
Linkage of faded gene (fe) to chromosome 6 of the mouse. |
Volume: |
36 |
Issue: |
1 |
Pages: |
73-7 |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE13062 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Publication |
First Author: |
Linton MF |
Year: |
1993 |
Journal: |
J Clin Invest |
Title: |
Transgenic mice expressing high plasma concentrations of human apolipoprotein B100 and lipoprotein(a). |
Volume: |
92 |
Issue: |
6 |
Pages: |
3029-37 |
|
•
•
•
•
•
|
Publication |
First Author: |
Callow MJ |
Year: |
1995 |
Journal: |
J Clin Invest |
Title: |
Atherogenesis in transgenic mice with human apolipoprotein B and lipoprotein (a). |
Volume: |
96 |
Issue: |
3 |
Pages: |
1639-46 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
179
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Chong L |
Year: |
1995 |
Journal: |
Science |
Title: |
A human telomeric protein. |
Volume: |
270 |
Issue: |
5242 |
Pages: |
1663-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Fairall L |
Year: |
2001 |
Journal: |
Mol Cell |
Title: |
Structure of the TRFH dimerization domain of the human telomeric proteins TRF1 and TRF2. |
Volume: |
8 |
Issue: |
2 |
Pages: |
351-61 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cooper JP |
Year: |
1997 |
Journal: |
Nature |
Title: |
Regulation of telomere length and function by a Myb-domain protein in fission yeast. |
Volume: |
385 |
Issue: |
6618 |
Pages: |
744-7 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Homologous_superfamily |
Description: |
Telomeres function to shield chromosome ends from degradation and end-to-end fusions, as well as preventing the activation of DNA damage checkpoints. Telomeric repeat binding factor (TRF) proteins TRF1 and TRF2 are major components of vertebrate telomeres required for regulation of telomere stability. TRF1 and TRF2 bind to telomeric DNA as homodimers. Dimerisation involves the TRF homology (TRFH) subdomain contained within the dimerisation domain. The TRFH subdomain is important not only for dimerisation, but for DNA binding, telomere localisation, and interactions with other telomeric proteins. The dimerisation domains of TRF1 and TRF2 show the same multi-helical structure, arranged in a solenoid conformation similar to TPR repeats, which can be divided into an α-α superhelix and a long alpha hairpin [].The two related human TRF proteins hTRF1 and hTRF2 form homodimers and bind directly to telomeric TTAGGG repeats via the myb DNA binding domain at the carboxy terminus []. TRF1 is implicated in telomere length regulation and TRF2 in telomere protection []. Other telomere complex associated proteins are recruited through their interaction with either TRF1 or TRF2. The fission yeast protein Taz1p (telomere-associated in Schizosaccharomyces pombe (Fission yeast) has similarity to both hTRF1 and hTRF2 and may perform the dual functions of TRF1 and TRF2 at fission yeast telomeres []. This entry represents the dimerisation domain. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This group represents telomeric repeat-binding factors 1 (TERF1, also known as TRF1).Telomeres function to shield chromosome ends from degradation and end-to-end fusions, as well as preventing the activation of DNA damage checkpoints. Telomeric repeat binding factor (TRF) proteins TRF1 and TRF2 are major components of vertebrate telomeres required for regulation of telomere stability. TRF1 and TRF2 bind to telomeric DNA as homodimers. Dimerisation involves the TRF homology (TRFH) subdomain contained within the dimerisation domain. The TRFH subdomain is important not only for dimerisation, but for DNA binding, telomere localisation, and interactions with other telomeric proteins. The dimerisation domains of TRF1 and TRF2 show the same multi-helical structure, arranged in a solenoid conformation similar to TPR repeats, which can be divided into an α-α superhelix and a long alpha hairpin [].The two related human TRF proteins hTRF1 and hTRF2 form homodimers and bind directly to telomeric TTAGGG repeats via the myb DNA binding domain at the carboxy terminus []. TRF1 is implicated in telomere length regulation and TRF2 in telomere protection []. Other telomere complex associated proteins are recruited through their interaction with either TRF1 or TRF2. The fission yeast protein Taz1p (telomere-associated in Schizosaccharomyces pombe (Fission yeast) has similarity to both hTRF1 and hTRF2 and may perform the dual functions of TRF1 and TRF2 at fission yeast telomeres []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry represents telomeric repeat-binding factor 2 (TERF2, also known as TRF2).Telomeres function to shield chromosome ends from degradation and end-to-end fusions, as well as preventing the activation of DNA damage checkpoints. Telomeric repeat binding factor (TRF) proteins TRF1 and TRF2 are major components of vertebrate telomeres required for regulation of telomere stability. TRF1 and TRF2 bind to telomeric DNA as homodimers. Dimerisation involves the TRF homology (TRFH) subdomain contained within the dimerisation domain. The TRFH subdomain is important not only for dimerisation, but for DNA binding, telomere localisation, and interactions with other telomeric proteins. The dimerisation domains of TRF1 and TRF2 show the same multi-helical structure, arranged in a solenoid conformation similar to TPR repeats, which can be divided into an α-α superhelix and a long alpha hairpin [].The two related human TRF proteins hTRF1 and hTRF2 form homodimers and bind directly to telomeric TTAGGG repeats via the myb DNA binding domain at the carboxy terminus []. TRF1 is implicated in telomere length regulation and TRF2 in telomere protection []. Other telomere complex associated proteins are recruited through their interaction with either TRF1 or TRF2. The fission yeast protein Taz1p (telomere-associated in Schizosaccharomyces pombe (Fission yeast) has similarity to both hTRF1 and hTRF2 and may perform the dual functions of TRF1 and TRF2 at fission yeast telomeres []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
Telomeres function to shield chromosome ends from degradation and end-to-end fusions, as well as preventing the activation of DNA damage checkpoints. Telomeric repeat binding factor (TRF) proteins TRF1 and TRF2 are major components of vertebrate telomeres required for regulation of telomere stability. TRF1 and TRF2 bind to telomeric DNA as homodimers. Dimerisation involves the TRF homology (TRFH) subdomain contained within the dimerisation domain. The TRFH subdomain is important not only for dimerisation, but for DNA binding, telomere localisation, and interactions with other telomeric proteins. The dimerisation domains of TRF1 and TRF2 show the same multi-helical structure, arranged in a solenoid conformation similar to TPR repeats, which can be divided into an α-α superhelix and a long alpha hairpin [].The two related human TRF proteins hTRF1 and hTRF2 form homodimers and bind directly to telomeric TTAGGG repeats via the myb DNA binding domain at the carboxy terminus []. TRF1 is implicated in telomere length regulation and TRF2 in telomere protection []. Other telomere complex associated proteins are recruited through their interaction with either TRF1 or TRF2. The fission yeast protein Taz1p (telomere-associated in Schizosaccharomyces pombe (Fission yeast) has similarity to both hTRF1 and hTRF2 and may perform the dual functions of TRF1 and TRF2 at fission yeast telomeres []. This entry represents the dimerisation domain. |
|
•
•
•
•
•
|
Publication |
First Author: |
Sanan DA |
Year: |
1998 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Low density lipoprotein receptor-negative mice expressing human apolipoprotein B-100 develop complex atherosclerotic lesions on a chow diet: no accentuation by apolipoprotein(a). |
Volume: |
95 |
Issue: |
8 |
Pages: |
4544-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Patel KM |
Year: |
2015 |
Journal: |
Circ Res |
Title: |
Macrophage sortilin promotes LDL uptake, foam cell formation, and atherosclerosis. |
Volume: |
116 |
Issue: |
5 |
Pages: |
789-96 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kassim SH |
Year: |
2010 |
Journal: |
PLoS One |
Title: |
Gene therapy in a humanized mouse model of familial hypercholesterolemia leads to marked regression of atherosclerosis. |
Volume: |
5 |
Issue: |
10 |
Pages: |
e13424 |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
RNA-Seq |
Study Type: |
Baseline |
Source: |
GEO |
|
•
•
•
•
•
|
Publication |
First Author: |
Crowley TE |
Year: |
1993 |
Journal: |
Nature |
Title: |
A new factor related to TATA-binding protein has highly restricted expression patterns in Drosophila. |
Volume: |
361 |
Issue: |
6412 |
Pages: |
557-61 |
|
•
•
•
•
•
|
Publication |
First Author: |
Marsh TL |
Year: |
1994 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Transcription factor IID in the Archaea: sequences in the Thermococcus celer genome would encode a product closely related to the TATA-binding protein of eukaryotes. |
Volume: |
91 |
Issue: |
10 |
Pages: |
4180-4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sbodio JI |
Year: |
2002 |
Journal: |
J Biol Chem |
Title: |
Identification of a tankyrase-binding motif shared by IRAP, TAB182, and human TRF1 but not mouse TRF1. NuMA contains this RXXPDG motif and is a novel tankyrase partner. |
Volume: |
277 |
Issue: |
35 |
Pages: |
31887-92 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Conserved_site |
Description: |
Transcription factor TFIID (or TATA-binding protein, TBP) []is a generalfactor that plays a major role in the activation of eukaryotic genestranscribed by RNA polymerase II. TFIID binds specifically to the TATA boxpromoter element which lies close to the position of transcription initiation.There is a remarkable degree of sequence conservation of a C-terminal domainof about 180 residues in TFIID from various eukaryotic sources. This region isnecessary and sufficient for TATA box binding. The most significant structuralfeature of this domain is the presence of two conserved repeats of a 77 amino-acid region. The intramolecular symmetry generates a saddle-shaped structurethat sits astride the DNA [].Drosophila TRF (TBP-related factor) []is a sequence-specific transcriptionfactor that also binds to the TATA box and is highly similar to TFIID. Archaebacteria also possess a TBP homologue [].This entry represents a conserved site that spans the last 50 residues of therepeated region. |
|
•
•
•
•
•
|
Publication |
First Author: |
Chaix A |
Year: |
2019 |
Journal: |
Cell Metab |
Title: |
Time-Restricted Feeding Prevents Obesity and Metabolic Syndrome in Mice Lacking a Circadian Clock. |
Volume: |
29 |
Issue: |
2 |
Pages: |
303-319.e4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Williams AS |
Year: |
2024 |
Journal: |
Cell Metab |
Title: |
Ketone flux through BDH1 supports metabolic remodeling of skeletal and cardiac muscles in response to intermittent time-restricted feeding. |
Volume: |
36 |
Issue: |
2 |
Pages: |
422-437.e8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Whittaker DS |
Year: |
2023 |
Journal: |
Cell Metab |
Title: |
Circadian modulation by time-restricted feeding rescues brain pathology and improves memory in mouse models of Alzheimer's disease. |
Volume: |
35 |
Issue: |
10 |
Pages: |
1704-1721.e6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wan Nasri WN |
Year: |
2019 |
Journal: |
J Alzheimers Dis |
Title: |
Tocotrienol Rich Fraction Supplementation Modulate Brain Hippocampal Gene Expression in APPswe/PS1dE9 Alzheimer's Disease Mouse Model. |
Volume: |
70 |
Issue: |
s1 |
Pages: |
S239-S254 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hopp K |
Year: |
2022 |
Journal: |
iScience |
Title: |
Weight loss and cystic disease progression in autosomal dominant polycystic kidney disease. |
Volume: |
25 |
Issue: |
1 |
Pages: |
103697 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhai Q |
Year: |
2022 |
Journal: |
iScience |
Title: |
Time-restricted feeding entrains long-term behavioral changes through the IGF2-KCC2 pathway. |
Volume: |
25 |
Issue: |
5 |
Pages: |
104267 |
|
•
•
•
•
•
|
Publication |
First Author: |
Maccarone P |
Year: |
1992 |
Journal: |
Genomics |
Title: |
The evolution of human chromosome 21: evidence from in situ hybridization in marsupials and a monotreme. |
Volume: |
13 |
Issue: |
4 |
Pages: |
1119-24 |
|
•
•
•
•
•
|
Publication |
First Author: |
Duregon E |
Year: |
2023 |
Journal: |
Cell Metab |
Title: |
Prolonged fasting times reap greater geroprotective effects when combined with caloric restriction in adult female mice. |
Volume: |
35 |
Issue: |
7 |
Pages: |
1179-1194.e5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Levy JE |
Year: |
1998 |
Journal: |
MGI Direct Data Submission |
Title: |
The Transferrin Receptor (Trfr) maps to mouse Chromosome 16 |
|
|
|
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
194
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
142
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Ye JZ |
Year: |
2004 |
Journal: |
J Biol Chem |
Title: |
TIN2 binds TRF1 and TRF2 simultaneously and stabilizes the TRF2 complex on telomeres. |
Volume: |
279 |
Issue: |
45 |
Pages: |
47264-71 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
421
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
476
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
421
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
392
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
541
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
540
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Ohbayashi T |
Year: |
1999 |
Journal: |
Nucleic Acids Res |
Title: |
Identification of a mouse TBP-like protein (TLP) distantly related to the drosophila TBP-related factor. |
Volume: |
27 |
Issue: |
3 |
Pages: |
750-5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kinashi T |
Year: |
1986 |
Journal: |
Nature |
Title: |
Cloning of complementary DNA encoding T-cell replacing factor and identity with B-cell growth factor II. |
Volume: |
324 |
Issue: |
6092 |
Pages: |
70-3 |
|
•
•
•
•
•
|
Publication |
First Author: |
Persengiev SP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
TRF3, a TATA-box-binding protein-related factor, is vertebrate-specific and widely expressed. |
Volume: |
100 |
Issue: |
25 |
Pages: |
14887-91 |
|
•
•
•
•
•
|
Publication |
First Author: |
Levy JE |
Year: |
1999 |
Journal: |
Nat Genet |
Title: |
Transferrin receptor is necessary for development of erythrocytes and the nervous system. |
Volume: |
21 |
Issue: |
4 |
Pages: |
396-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hou T |
Year: |
2021 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Time-restricted feeding protects the blood pressure circadian rhythm in diabetic mice. |
Volume: |
118 |
Issue: |
25 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang Z |
Year: |
2020 |
Journal: |
Sci Bull (Beijing) |
Title: |
Impaired function of the suprachiasmatic nucleus rescues the loss of body temperature homeostasis caused by time-restricted feeding. |
Volume: |
65 |
Issue: |
15 |
Pages: |
1268-1280 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hua L |
Year: |
2023 |
Journal: |
FASEB J |
Title: |
Liver-derived FGF21 is required for the effect of time-restricted feeding on high-fat diet-induced fatty liver in mice. |
Volume: |
37 |
Issue: |
5 |
Pages: |
e22898 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hua L |
Year: |
2020 |
Journal: |
Clin Transl Med |
Title: |
Time-restricted feeding improves the reproductive function of female mice via liver fibroblast growth factor 21. |
Volume: |
10 |
Issue: |
6 |
Pages: |
e195 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jung IR |
Year: |
2024 |
Journal: |
Int J Mol Sci |
Title: |
Time-Restricted Feeding Ameliorates Methionine-Choline Deficient Diet-Induced Steatohepatitis in Mice. |
Volume: |
25 |
Issue: |
3 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Shu YY |
Year: |
2022 |
Journal: |
Oxid Med Cell Longev |
Title: |
Attenuation by Time-Restricted Feeding of High-Fat and High-Fructose Diet-Induced NASH in Mice Is Related to Per2 and Ferroptosis. |
Volume: |
2022 |
|
Pages: |
8063897 |
|
•
•
•
•
•
|
Publication |
First Author: |
Takatsu K |
Year: |
1981 |
Journal: |
Immunol Lett |
Title: |
X-linked recessive inheritance of a defective responsiveness to T-cell-replacing factor in DBA/2Ha mice. |
Volume: |
3 |
Issue: |
3 |
Pages: |
137-43 |
|
•
•
•
•
•
|
Publication |
First Author: |
Krzanowska H |
Year: |
1994 |
Journal: |
Mol Reprod Dev |
Title: |
Frequency of X-Y chromosome dissociation in mouse spermatocytes from interstrain crosses, recombinant inbred strains, and chimeras: possible involvement of paternal genome imprinting. |
Volume: |
39 |
Issue: |
4 |
Pages: |
347-54 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kiyozuka Y |
Year: |
1998 |
Journal: |
Int J Mol Med |
Title: |
Telomere length, telomerase activity and telomerase RNA expression during mouse mammary tumor progression. |
Volume: |
2 |
Issue: |
4 |
Pages: |
437-44 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang S |
Year: |
2019 |
Journal: |
Aging (Albany NY) |
Title: |
Identification of functional tRNA-derived fragments in senescence-accelerated mouse prone 8 brain. |
Volume: |
11 |
Issue: |
22 |
Pages: |
10485-10498 |
|
•
•
•
•
•
|
Publication |
First Author: |
Falconi M |
Year: |
2019 |
Journal: |
FASEB J |
Title: |
A novel 3'-tRNAGlu-derived fragment acts as a tumor suppressor in breast cancer by targeting nucleolin. |
Volume: |
33 |
Issue: |
12 |
Pages: |
13228-13240 |
|
•
•
•
•
•
|
Publication |
First Author: |
Das M |
Year: |
2021 |
Journal: |
Nat Commun |
Title: |
Time-restricted feeding normalizes hyperinsulinemia to inhibit breast cancer in obese postmenopausal mouse models. |
Volume: |
12 |
Issue: |
1 |
Pages: |
565 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hoffman A |
Year: |
1990 |
Journal: |
Nature |
Title: |
Highly conserved core domain and unique N terminus with presumptive regulatory motifs in a human TATA factor (TFIID). |
Volume: |
346 |
Issue: |
6282 |
Pages: |
387-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang W |
Year: |
2022 |
Journal: |
Neuroendocrinology |
Title: |
Time-Restricted Feeding Restored Insulin-Growth Hormone Balance and Improved Substrate and Energy Metabolism in MC4RKO Obese Mice. |
Volume: |
112 |
Issue: |
2 |
Pages: |
174-185 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sabbir MG |
Year: |
2018 |
Journal: |
Front Mol Biosci |
Title: |
Loss of Ca2+/Calmodulin Dependent Protein Kinase Kinase 2 Leads to Aberrant Transferrin Phosphorylation and Trafficking: A Potential Biomarker for Alzheimer's Disease. |
Volume: |
5 |
|
Pages: |
99 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
212
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
152
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
64
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
260
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Xiao H |
Year: |
1999 |
Journal: |
J Biol Chem |
Title: |
The human homologue of Drosophila TRF-proximal protein is associated with an RNA polymerase II-SRB complex. |
Volume: |
274 |
Issue: |
7 |
Pages: |
3937-40 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation.The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directlywith MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP.Proteins in this entry are subunit Med20 of the Mediator complex, and is found in the non-essential part of the head []. and related to the TATA-binding protein (TBP). TBP is a highly conserved RNA polymerase II general transcription factor that binds to the core promoter and initiates assembly of the pre-initiation complex. Human TRF has been shown to associate with an RNA polymerase II-SRB complex []. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
350
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
316
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
348
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
349
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
316
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
250
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Nikolov DB |
Year: |
1992 |
Journal: |
Nature |
Title: |
Crystal structure of TFIID TATA-box binding protein. |
Volume: |
360 |
Issue: |
6399 |
Pages: |
40-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hilgers J |
Year: |
1976 |
Journal: |
Mouse News Lett |
Title: |
Inbred strains and markers. |
Volume: |
54 |
|
Pages: |
30-1 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bourbon HM |
Year: |
2004 |
Journal: |
Mol Cell |
Title: |
A unified nomenclature for protein subunits of mediator complexes linking transcriptional regulators to RNA polymerase II. |
Volume: |
14 |
Issue: |
5 |
Pages: |
553-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Expression Nervous System Atlas (GENSAT) Project, The Rockefeller University (New York, NY) |
Year: |
2005 |
Journal: |
Database Download |
Title: |
MGI download of GENSAT transgene data |
|
|
|
|
•
•
•
•
•
|