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Search results 401 to 500 out of 4706 for Coil

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Type Details Score
GXD Expression
GXD Expression
   
Probe: MGI:3851977
Assay Type: RT-PCR
Annotation Date: 2009-08-06
Strength: Absent
Sex: Female
Emaps: EMAPS:1796227
Stage: TS27
Assay Id: MGI:3852202
Age: postnatal newborn
Image: 8
Specimen Label: Newborn
Detected: false
Specimen Num: 12
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GXD Expression
GXD Expression
   
Probe: MGI:3851977
Assay Type: RT-PCR
Annotation Date: 2009-08-06
Strength: Present
Sex: Female
Emaps: EMAPS:1796227
Stage: TS27
Assay Id: MGI:3852202
Age: postnatal day 2
Image: 8
Specimen Label: 2d
Detected: true
Specimen Num: 13
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GXD Expression
GXD Expression
   
Probe: MGI:3851977
Assay Type: RT-PCR
Annotation Date: 2009-08-06
Strength: Absent
Sex: Female
Emaps: EMAPS:1796227
Stage: TS27
Assay Id: MGI:3852202
Age: postnatal day 2
Image: 8
Specimen Label: 2d
Detected: false
Specimen Num: 14
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GXD Expression
GXD Expression
   
Probe: MGI:3851977
Assay Type: RT-PCR
Annotation Date: 2009-08-06
Strength: Present
Sex: Female
Emaps: EMAPS:1796228
Stage: TS28
Assay Id: MGI:3852202
Age: postnatal day 7
Image: 8
Specimen Label: 7d
Detected: true
Specimen Num: 15
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GXD Expression
GXD Expression
   
Probe: MGI:3851977
Assay Type: RT-PCR
Annotation Date: 2009-08-06
Strength: Absent
Sex: Female
Emaps: EMAPS:1796228
Stage: TS28
Assay Id: MGI:3852202
Age: postnatal day 7
Image: 8
Specimen Label: 7d
Detected: false
Specimen Num: 16
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Protein Domain
IPR012290 | Fibrinogen_a/b/g_coil_dom
Type: Domain
Description: Fibrinogen plays key roles in both blood clotting and platelet aggregation. During blood clot formation, the conversion of soluble fibrinogen to insoluble fibrin is triggered by thrombin, resulting in the polymerisation of fibrin, which forms a soft clot; this is then converted to a hard clot by factor XIIIA, which cross-links fibrin molecules. Platelet aggregation involves the binding of the platelet protein receptor integrin alpha(IIb)-beta(3) to the C-terminal D domain of fibrinogen []. In addition to platelet aggregation, platelet-fibrinogen interaction mediates both adhesion and fibrin clot retraction. Fibrinogen occurs as a dimer, where each monomer is composed of three non-identical chains, alpha, beta and gamma, linked together by several disulphide bonds []. The N-terminals of all six chains come together to form the centre of the molecule (E domain), from which the monomers extend in opposite directions as coiled coils, followed by C-terminal globular domains (D domains). Therefore, the domain composition is: D-coil-E-coil-D. At each end, the C-terminal of the alpha chain extends beyond the D domain as a protuberance that is important for cross-linking the molecule. During clot formation, the N-terminal fragments of the alpha and beta chains (within the E domain) in fibrinogen are cleaved by thrombin, releasing fibrinopeptides A and B, respectively, and producing fibrin. This cleavage results in the exposure of four binding sites on the E domain, each of which can bind to a D domain from different fibrin molecules. The binding of fibrin molecules produces a polymer consisting of a lattice network of fibrins that form a long, branching, flexible fibre [, ]. Fibrin fibres interact with platelets to increase the size of the clot, as well as with several different proteins and cells, thereby promoting the inflammatory response and concentrating the cells required for wound repair at the site of damage.This entry represents the coiled-coil domain and part of the N-terminal E domain found in all three fibrinogen polypeptides, namely the alpha, beta and gamma chains.
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Protein Domain
IPR015347 | STAT_TF_homologue_coiled-coil
Type: Domain
Description: The STAT protein (Signal Transducers and Activators of Transcription) family contains transcription factors that are specifically activated to regulate gene transcription when cells encounter cytokines and growth factors, hence they act as signal transducers in the cytoplasm and transcription activators in the nucleus []. Binding of these factors to cell-surface receptors leads to receptor autophosphorylation at a tyrosine, the phosphotyrosine being recognised by the STAT SH2 domain, which mediates the recruitment of STAT proteins from the cytosol and their association with the activated receptor. The STAT proteins are then activated by phosphorylation via members of the JAK family of protein kinases, causing them to dimerise and translocated to the nucleus, where they bind to specific promoter sequences in target genes. In mammals, STATs comprise a family of seven structurally and functionally related proteins: Stat1, Stat2, Stat3, Stat4, Stat5a and Stat5b, Stat6. STAT proteins play a critical role in regulating innate and acquired host immune responses. Dysregulation of at least two STAT signalling cascades (i.e. Stat3 and Stat5) is associated with cellular transformation.Signalling through the JAK/STAT pathway is initiated when a cytokine binds to its corresponding receptor. This leads to conformational changes in the cytoplasmic portion of the receptor, initiating activation of receptor associated members of the JAK family of kinases. The JAKs, in turn, mediate phosphorylation at the specific receptor tyrosine residues, which then serve as docking sites for STATs and other signalling molecules. Once recruited to the receptor, STATs also become phosphorylated by JAKs, on a single tyrosine residue. Activated STATs dissociate from the receptor, dimerise, translocate to the nucleus and bind to members of the GAS (gamma activated site) family of enhancers.The seven STAT proteins identified in mammals range in size from 750 and 850 amino acids. The chromosomal distribution of these STATs, as well as the identification of STATs in more primitive eukaryotes, suggest that this family arose from a single primordial gene. STATs share 6 structurally and functionally conserved domains including: an N-terminal domain (ND) that strengthens interactions between STAT dimers on adjacent DNA-binding sites; a coiled-coil STAT domain (CCD) that is implicated in protein-protein interactions; a DNA-binding domain (DBD) with an immunoglobulin-like fold similar to p53 tumour suppressor protein; an EF-hand-like linker domain connecting the DNA-binding and SH2 domains; an SH2 domain () that acts as a phosphorylation-dependent switch to control receptor recognition and DNA-binding; and a C-terminal transactivation domain [, , ]. The crystal structure of the N terminus of Stat4 reveals a dimer. The interface of this dimer is formed by a ring-shaped element consisting of five short helices. Several studies suggest that this N-terminal dimerisation promotes cooperativity of binding to tandem GAS elements and with the transcriptional coactivator CBP/p300.This entry represents a domain found in Dictyostelium STAT proteins. This domain adopts a structure consisting of four long α-helices, folded into a coiled coil. It is responsible for nuclear export of the protein [].
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Publication
26965371 | J:232855
First Author: Yadav SP
Year: 2016
Journal: Development
Title: Centrosomal protein CP110 controls maturation of the mother centriole during cilia biogenesis.
Volume: 143
Issue: 9
Pages: 1491-501
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Protein
F6W0C2
Organism: Mus musculus/domesticus
Length: 185  
Fragment?: true
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Publication
22610097 | -
First Author: Peralta S
Year: 2012
Journal: J Biol Chem
Title: Coiled coil domain-containing protein 56 (CCDC56) is a novel mitochondrial protein essential for cytochrome c oxidase function.
Volume: 287
Issue: 29
Pages: 24174-85
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Allele
Tmcc3<+> | MGI:3525057
   
Name: transmembrane and coiled coil domains 3; wild type
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Allele
Tmcc1<+> | MGI:3525577
   
Name: transmembrane and coiled coil domains 1; wild type
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Allele
Calcoco1<+> | MGI:3577047
 
Name: calcium binding and coiled coil domain 1; wild type
Allele Type: Not Specified
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Allele
Tmcc3os<+> | MGI:3802197
 
Name: transmembrane and coiled coil domains 3, opposite strand; wild type
Allele Type: Not Specified
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Allele
Gcc1<tm1(KOMP)Vlcg> | MGI:3812910
Name: golgi coiled coil 1; targeted mutation 1, Velocigene
Allele Type: Targeted
Attribute String: Null/knockout, Reporter
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Allele
Ccdc88a<tm1Mat> | MGI:3835852
Name: coiled coil domain containing 88A; targeted mutation 1, Masahide Takahashi
Allele Type: Targeted
Attribute String: Null/knockout, Reporter
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Allele
Ccdc88a<Gt(YHD255)Byg> | MGI:3878136
 
Name: coiled coil domain containing 88A; gene trap YHD255, BayGenomics
Allele Type: Gene trapped
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Allele
Ccdc88a<Gt(YTA487)Byg> | MGI:3882669
 
Name: coiled coil domain containing 88A; gene trap YTA487, BayGenomics
Allele Type: Gene trapped
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Allele
Wdcp<Gt(NPX472)Byg> | MGI:4125192
 
Name: WD repeat and coiled coil containing; gene trap NPX472, BayGenomics
Allele Type: Gene trapped
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Allele
Ccdc178<Gt(OST1684)Lex> | MGI:4132069
 
Name: coiled coil domain containing 178; gene trap OST1684, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Ccdc200<Gt(OST14645)Lex> | MGI:4140091
 
Name: coiled coil domain containing 200; gene trap OST14645, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Ccp110<Gt(OST129831)Lex> | MGI:4197057
 
Name: centriolar coiled coil protein 110; gene trap OST129831, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Ccdc28b<Gt(OST144089)Lex> | MGI:4203527
 
Name: coiled coil domain containing 28B; gene trap OST144089, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Ccp110<Gt(OST194028)Lex> | MGI:4225388
 
Name: centriolar coiled coil protein 110; gene trap OST194028, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Ccp110<Gt(OST205387)Lex> | MGI:4231368
 
Name: centriolar coiled coil protein 110; gene trap OST205387, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Ccdc28b<Gt(OST428458)Lex> | MGI:4313816
 
Name: coiled coil domain containing 28B; gene trap OST428458, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Ccdc88a<tm2.1Mat> | MGI:5140603
Name: coiled coil domain containing 88A; targeted mutation 2.1, Masahide Takahashi
Allele Type: Targeted
Attribute String: Null/knockout
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Allele
Ccdc88a<tm3.1Mat> | MGI:5140605
 
Name: coiled coil domain containing 88A; targeted mutation 3.1, Masahide Takahashi
Allele Type: Targeted
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Allele
Ccdc178<tm1(KOMP)Vlcg> | MGI:5286525
Name: coiled coil domain containing 178; targeted mutation 1, Velocigene
Allele Type: Targeted
Attribute String: Null/knockout, Reporter
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Allele
Ccdc88a<tm4.1Mat> | MGI:5449207
Name: coiled coil domain containing 88A; targeted mutation 4.1, Masahide Takahashi
Allele Type: Targeted
Attribute String: Conditional ready, No functional change
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Allele
Percc1<+> | MGI:5625531
 
Name: proline and glutamate rich with coiled coil 1; wild type
Allele Type: Not Specified
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Allele
Tmcc3<em1(IMPC)J> | MGI:5763283
Name: transmembrane and coiled coil domains 3; endonuclease-mediated mutation 1, Jackson
Allele Type: Endonuclease-mediated
Attribute String: Null/knockout
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Allele
Wdcp<+> | MGI:5817791
   
Name: WD repeat and coiled coil containing; wild type
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Allele
Ccp110<tm1.1Asw> | MGI:5816714
Name: centriolar coiled coil protein 110; targeted mutation 1.1, Anand Swaroop
Allele Type: Targeted
Attribute String: Conditional ready
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Allele
Ccp110<tm1.2Asw> | MGI:5816715
Name: centriolar coiled coil protein 110; targeted mutation 1.2, Anand Swaroop
Allele Type: Targeted
Attribute String: Null/knockout
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Allele
Gcc1<em2Gpt> | MGI:7299487
Name: golgi coiled coil 1; endonuclease-mediated mutation 2, GemPharmatech Co., Ltd
Allele Type: Endonuclease-mediated
Attribute String: Null/knockout
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Allele
Ccp110<tm1.1Tks> | MGI:7610636
Name: centriolar coiled coil protein 110; targeted mutation 1.1, Takashi Saito
Allele Type: Targeted
Attribute String: Conditional ready, Inserted expressed sequence, Reporter
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Allele
Ccdc178<em1Cya> | MGI:7792506
Name: coiled coil domain containing 178; endonuclease-mediated mutation 1, Cyagen Biosciences
Allele Type: Endonuclease-mediated
Attribute String: Null/knockout
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Publication
22995754 | -
First Author: Carlier L
Year: 2012
Journal: J Struct Biol
Title: The C-terminal domain of the Uup protein is a DNA-binding coiled coil motif.
Volume: 180
Issue: 3
Pages: 577-84
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MP Term
MP:0000674 | abnormal sweat gland morphology
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MP Term
MP:0006367 | absent sweat gland
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Protein Coding Gene
MGI_C57BL6J_5621540 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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GXD Expression
GXD Expression
   
Probe: MGI:6384629
Assay Type: RNA in situ
Annotation Date: 2020-01-13
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1750322
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:6384646
Age: embryonic day 14.5
Specimen Label: S5c,d
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:6384629
Assay Type: RNA in situ
Annotation Date: 2020-01-13
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1885222
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:6384646
Age: embryonic day 14.5
Specimen Label: S5c,d
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:6384629
Assay Type: RNA in situ
Annotation Date: 2020-01-13
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1702122
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:6384646
Age: embryonic day 14.5
Specimen Label: S5c,d
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
Probe: MGI:2446087
Assay Type: Immunohistochemistry
Annotation Date: 2018-08-28
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1759723
Pattern: Regionally restricted
Stage: TS23
Assay Id: MGI:6195805
Age: embryonic day 15.5
Image: 1E
Note: Expression in inner hair cells. Expression induced in outer hair cells in basal coil of cochlea, close to the lumen.
Specimen Label: 1E
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
 
Probe: MGI:5775902
Assay Type: RNA in situ
Annotation Date: 2016-06-14
Strength: Present
Sex: Male
Emaps: EMAPS:1929025
Pattern: Regionally restricted
Stage: TS25
Assay Id: MGI:5775923
Age: embryonic day 17.5
Note: Expression in mesenchyme as the anterior Wolffian duct begans to coil and take on the appearance of the adult epididymis.
Specimen Label: E17.5 not shown
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
 
Probe: MGI:5775902
Assay Type: RNA in situ
Annotation Date: 2016-06-14
Strength: Present
Sex: Male
Emaps: EMAPS:1929026
Pattern: Regionally restricted
Stage: TS26
Assay Id: MGI:5775923
Age: embryonic day 19.5
Note: Expression in mesenchyme as the anterior Wolffian duct begins to coil and take on the appearance of the adult epididymis.
Specimen Label: E19.5 not shown
Detected: true
Specimen Num: 4
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Protein Coding Gene
MGP_CAROLIEiJ_G0016156 | -
Type: protein_coding_gene
Organism: Mus caroli
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ncRNA Gene
MGP_CAROLIEiJ_G0002708 | -
Type: ncRNA_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_CAROLIEiJ_G0022038 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_CAROLIEiJ_G0026530 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_CAROLIEiJ_G0030369 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0018106 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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ncRNA Gene
MGP_129S1SvImJ_G0003064 | -
Type: ncRNA_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_129S1SvImJ_G0024189 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_129S1SvImJ_G0028834 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_129S1SvImJ_G0032903 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0018078 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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ncRNA Gene
MGP_AJ_G0003041 | -
Type: ncRNA_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0024154 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0028793 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0032886 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0018043 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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ncRNA Gene
MGP_AKRJ_G0003022 | -
Type: ncRNA_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0024123 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0028746 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0032818 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0018046 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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ncRNA Gene
MGP_BALBcJ_G0003028 | -
Type: ncRNA_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0024154 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0028816 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0032891 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0017860 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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ncRNA Gene
MGP_C3HHeJ_G0002984 | -
Type: ncRNA_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0023922 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0028530 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0032601 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_1925177 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_3650266 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_1918200 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_1913514 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_2141942 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0018499 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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ncRNA Gene
MGP_C57BL6NJ_G0003170 | -
Type: ncRNA_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0024596 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0029258 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0033397 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0017422 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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ncRNA Gene
MGP_CASTEiJ_G0002954 | -
Type: ncRNA_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0023395 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0027962 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0031929 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0017834 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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ncRNA Gene
MGP_CBAJ_G0002981 | -
Type: ncRNA_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0023890 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0028496 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0032574 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0017944 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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•
•
•
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ncRNA Gene
MGP_DBA2J_G0002987 | -
Type: ncRNA_gene
Organism: mouse, laboratory
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•
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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