| Type |
Details |
Score |
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| First Author: |
Murakami A |
| Year: |
2001 |
| Journal: |
Nucleic Acids Res |
| Title: |
SOX6 binds CtBP2 to repress transcription from the Fgf-3 promoter. |
| Volume: |
29 |
| Issue: |
16 |
| Pages: |
3347-55 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Xie Z |
| Year: |
2023 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
ZBTB20 is essential for cochlear maturation and hearing in mice. |
| Volume: |
120 |
| Issue: |
24 |
| Pages: |
e2220867120 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Nakahara M |
| Year: |
2013 |
| Journal: |
Mamm Genome |
| Title: |
Gene-trap mutagenesis using Mol/MSM-1 embryonic stem cells from MSM/Ms mice. |
| Volume: |
24 |
| Issue: |
5-6 |
| Pages: |
228-39 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Martinez G |
| Year: |
2009 |
| Journal: |
Invest Ophthalmol Vis Sci |
| Title: |
Conditional mutations of beta-catenin and APC reveal roles for canonical Wnt signaling in lens differentiation. |
| Volume: |
50 |
| Issue: |
10 |
| Pages: |
4794-806 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tarantino C |
| Year: |
2010 |
| Journal: |
FASEB J |
| Title: |
miRNA 34a, 100, and 137 modulate differentiation of mouse embryonic stem cells. |
| Volume: |
24 |
| Issue: |
9 |
| Pages: |
3255-63 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Okazaki Y |
| Year: |
2002 |
| Journal: |
Nature |
| Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
| Volume: |
420 |
| Issue: |
6915 |
| Pages: |
563-73 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lumayag S |
| Year: |
2013 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration. |
| Volume: |
110 |
| Issue: |
6 |
| Pages: |
E507-16 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Elsen GE |
| Year: |
2018 |
| Journal: |
Front Neurosci |
| Title: |
The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1. |
| Volume: |
12 |
|
| Pages: |
571 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Shimizu H |
| Year: |
2013 |
| Journal: |
PLoS One |
| Title: |
The AERO system: a 3D-like approach for recording gene expression patterns in the whole mouse embryo. |
| Volume: |
8 |
| Issue: |
10 |
| Pages: |
e75754 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Jackson Laboratory |
| Year: |
2005 |
| Journal: |
Unpublished |
| Title: |
Information obtained from The Jackson Laboratory, Bar Harbor, ME |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Araki K |
| Year: |
1999 |
| Journal: |
Cell Mol Biol (Noisy-le-grand) |
| Title: |
Exchangeable gene trap using the Cre/mutated lox system. |
| Volume: |
45 |
| Issue: |
5 |
| Pages: |
737-50 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Taniwaki T |
| Year: |
2005 |
| Journal: |
Dev Growth Differ |
| Title: |
Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette. |
| Volume: |
47 |
| Issue: |
3 |
| Pages: |
163-72 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Jackson Laboratory Backcross DNA Panel Mapping Resource |
| Year: |
1999 |
| Journal: |
Database Release |
| Title: |
JAX BSS Panel Mapping Data |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ko MS |
| Year: |
2000 |
| Journal: |
Development |
| Title: |
Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. |
| Volume: |
127 |
| Issue: |
8 |
| Pages: |
1737-49 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yokoyama S |
| Year: |
2009 |
| Journal: |
Dev Cell |
| Title: |
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. |
| Volume: |
17 |
| Issue: |
6 |
| Pages: |
836-48 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2001 |
|
| Title: |
Gene Ontology Annotation by the MGI Curatorial Staff |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2003 |
| Journal: |
Database Download |
| Title: |
Integrating Computational Gene Models into the Mouse Genome Informatics (MGI) Database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
MGI and IMPC |
| Year: |
2018 |
| Journal: |
Database Release |
| Title: |
MGI Load of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2016 |
|
| Title: |
Automatic assignment of GO terms using logical inference, based on on inter-ontology links |
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|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Thompson CL |
| Year: |
2014 |
| Journal: |
Neuron |
| Title: |
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. |
| Volume: |
83 |
| Issue: |
2 |
| Pages: |
309-323 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Stryke D |
| Year: |
2003 |
| Journal: |
Nucleic Acids Res |
| Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
| Volume: |
31 |
| Issue: |
1 |
| Pages: |
278-81 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bedogni F |
| Year: |
2021 |
| Journal: |
Front Mol Neurosci |
| Title: |
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
| Volume: |
14 |
|
| Pages: |
686034 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
International Mouse Strain Resource |
| Year: |
2014 |
| Journal: |
Database Download |
| Title: |
MGI download of germline transmission data for alleles from IMSR strain data |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wellcome Trust Sanger Institute |
| Year: |
2010 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
| Year: |
2014 |
| Journal: |
Database Release |
| Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Helmholtz Zentrum Muenchen GmbH |
| Year: |
2010 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
DDB, FB, MGI, GOA, ZFIN curators |
| Year: |
2001 |
|
| Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2003 |
|
| Title: |
MGI Sequence Curation Reference |
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•
•
•
•
•
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| Publication |
| First Author: |
Carninci P |
| Year: |
2005 |
| Journal: |
Science |
| Title: |
The transcriptional landscape of the mammalian genome. |
| Volume: |
309 |
| Issue: |
5740 |
| Pages: |
1559-63 |
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•
•
•
•
•
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| Publication |
| First Author: |
Adams DJ |
| Year: |
2024 |
| Journal: |
Nature |
| Title: |
Genetic determinants of micronucleus formation in vivo. |
| Volume: |
627 |
| Issue: |
8002 |
| Pages: |
130-136 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zambrowicz BP |
| Year: |
2003 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
| Volume: |
100 |
| Issue: |
24 |
| Pages: |
14109-14 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
GemPharmatech |
| Year: |
2020 |
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| Title: |
GemPharmatech Website. |
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•
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•
•
•
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| Publication |
| First Author: |
Skarnes WC |
| Year: |
2011 |
| Journal: |
Nature |
| Title: |
A conditional knockout resource for the genome-wide study of mouse gene function. |
| Volume: |
474 |
| Issue: |
7351 |
| Pages: |
337-42 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
| Year: |
2008 |
| Journal: |
Database Download |
| Title: |
Mouse Gene Trap Data Load from dbGSS |
|
|
|
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•
•
•
•
•
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| Publication |
| First Author: |
Cyagen Biosciences Inc. |
| Year: |
2022 |
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| Title: |
Cyagen Biosciences Website. |
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•
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•
•
•
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| Publication |
| First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
| Year: |
2004 |
| Journal: |
Database Release |
| Title: |
Mouse T31 Radiation Hybrid Data Load |
|
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|
•
•
•
•
•
|
| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2010 |
|
| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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•
•
•
•
•
|
| Publication |
| First Author: |
Diez-Roux G |
| Year: |
2011 |
| Journal: |
PLoS Biol |
| Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
e1000582 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
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•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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•
•
•
•
•
|
| Publication |
| First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
| Year: |
2010 |
|
| Title: |
Annotation inferences using phylogenetic trees |
|
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|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Allen Institute for Brain Science |
| Year: |
2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Group |
| Year: |
2003 |
| Journal: |
Database Procedure |
| Title: |
Automatic Encodes (AutoE) Reference |
|
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|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bairoch A |
| Year: |
1999 |
| Journal: |
Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
445
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Allele |
| Name: |
C-terminal binding protein 2; endonuclease-mediated mutation 1, Hitoshi Shimano |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Conditional ready |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
988
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Interaction Experiment |
| Description: |
Identification of CtBP1 and CtBP2 as corepressors of zinc finger-homeodomain factor deltaEF1. |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
Baseline |
| Source: |
GEO |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Chen WY |
| Year: |
2005 |
| Journal: |
Cell |
| Title: |
Tumor suppressor HIC1 directly regulates SIRT1 to modulate p53-dependent DNA-damage responses. |
| Volume: |
123 |
| Issue: |
3 |
| Pages: |
437-48 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhang W |
| Year: |
2010 |
| Journal: |
Oncogene |
| Title: |
A potential tumor suppressor role for Hic1 in breast cancer through transcriptional repression of ephrin-A1. |
| Volume: |
29 |
| Issue: |
17 |
| Pages: |
2467-76 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Van Rechem C |
| Year: |
2009 |
| Journal: |
J Biol Chem |
| Title: |
Scavenger chemokine (CXC motif) receptor 7 (CXCR7) is a direct target gene of HIC1 (hypermethylated in cancer 1). |
| Volume: |
284 |
| Issue: |
31 |
| Pages: |
20927-35 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Pinte S |
| Year: |
2004 |
| Journal: |
J Biol Chem |
| Title: |
The tumor suppressor gene HIC1 (hypermethylated in cancer 1) is a sequence-specific transcriptional repressor: definition of its consensus binding sequence and analysis of its DNA binding and repressive properties. |
| Volume: |
279 |
| Issue: |
37 |
| Pages: |
38313-24 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Van Rechem C |
| Year: |
2010 |
| Journal: |
Mol Cell Biol |
| Title: |
Differential regulation of HIC1 target genes by CtBP and NuRD, via an acetylation/SUMOylation switch, in quiescent versus proliferating cells. |
| Volume: |
30 |
| Issue: |
16 |
| Pages: |
4045-59 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
Hypermethylated in cancer 1 (HIC1) is a transcriptional repressor that modulates P53-dependent and E2F1-dependent cell growth control and is epigenetically inactivated in various human cancers []. It recognises and binds to the consensus sequence '5-[CG]NG[CG]GGGCA[CA]CC-3' []. It is a direct transcriptional repressor of ephrin-A1 and CXCR7, which are implicated in the pathogenesis of different cancers [, ]. HIC1 is also involved in down-regulation of SIRT1 and thereby is involved in regulation of p53/TP53-dependent apoptotic DNA-damage responses []. HIC1 interacts with several different corepressors such as CTBP1, CTBP2 and MTA1 (a subunit of the NuRD complex) []. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Stolt CC |
| Year: |
2008 |
| Journal: |
Nucleic Acids Res |
| Title: |
The transcription factor Sox5 modulates Sox10 function during melanocyte development. |
| Volume: |
36 |
| Issue: |
17 |
| Pages: |
5427-40 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Di Magno L |
| Year: |
2020 |
| Journal: |
Cell Rep |
| Title: |
Phenformin Inhibits Hedgehog-Dependent Tumor Growth through a Complex I-Independent Redox/Corepressor Module. |
| Volume: |
30 |
| Issue: |
6 |
| Pages: |
1735-1752.e7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Stankewich MC |
| Year: |
2022 |
| Journal: |
Hear Res |
| Title: |
Outer hair cell function is normal in βV spectrin knockout mice. |
| Volume: |
423 |
|
| Pages: |
108564 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Paliwal S |
| Year: |
2006 |
| Journal: |
Mol Cell Biol |
| Title: |
Targeting of C-terminal binding protein (CtBP) by ARF results in p53-independent apoptosis. |
| Volume: |
26 |
| Issue: |
6 |
| Pages: |
2360-72 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Chen Y |
| Year: |
2021 |
| Journal: |
Cell Rep |
| Title: |
Generation of mature and functional hair cells by co-expression of Gfi1, Pou4f3, and Atoh1 in the postnatal mouse cochlea. |
| Volume: |
35 |
| Issue: |
3 |
| Pages: |
109016 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Li K |
| Year: |
2023 |
| Journal: |
J Clin Invest |
| Title: |
The CTBP2-PCIF1 complex regulates m6Am modification of mRNA in head and neck squamous cell carcinoma. |
| Volume: |
133 |
| Issue: |
20 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zu M |
| Year: |
2021 |
| Journal: |
BMC Neurosci |
| Title: |
SCN11A gene deletion causes sensorineural hearing loss by impairing the ribbon synapses and auditory nerves. |
| Volume: |
22 |
| Issue: |
1 |
| Pages: |
18 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kurasawa S |
| Year: |
2023 |
| Journal: |
Neurobiol Dis |
| Title: |
Loss of synaptic ribbons is an early cause in ROS-induced acquired sensorineural hearing loss. |
| Volume: |
186 |
|
| Pages: |
106280 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
232
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Meijer BJ |
| Year: |
2021 |
| Journal: |
Sci Rep |
| Title: |
Endoplasmic reticulum stress regulates the intestinal stem cell state through CtBP2. |
| Volume: |
11 |
| Issue: |
1 |
| Pages: |
9892 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
141
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
733
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
714
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kawai J |
| Year: |
2001 |
| Journal: |
Nature |
| Title: |
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Genome Res |
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Genome Res |
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RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. |
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Science |
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2004 |
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Genome Res |
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The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
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2010 |
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Cell |
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A tissue-specific atlas of mouse protein phosphorylation and expression. |
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2009 |
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PLoS Biol |
| Title: |
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