Type |
Details |
Score |
Publication |
First Author: |
Ishiguro A |
Year: |
2008 |
Journal: |
FEBS Lett |
Title: |
Functional role of Zic2 phosphorylation in transcriptional regulation. |
Volume: |
582 |
Issue: |
2 |
Pages: |
154-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lee CG |
Year: |
1998 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
RNA helicase A is essential for normal gastrulation. |
Volume: |
95 |
Issue: |
23 |
Pages: |
13709-13 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang S |
Year: |
2004 |
Journal: |
Exp Cell Res |
Title: |
Nuclear DNA helicase II (RNA helicase A) binds to an F-actin containing shell that surrounds the nucleolus. |
Volume: |
293 |
Issue: |
2 |
Pages: |
248-58 |
|
•
•
•
•
•
|
Publication |
First Author: |
Padmanabhan K |
Year: |
2012 |
Journal: |
Science |
Title: |
Feedback regulation of transcriptional termination by the mammalian circadian clock PERIOD complex. |
Volume: |
337 |
Issue: |
6094 |
Pages: |
599-602 |
|
•
•
•
•
•
|
Publication |
First Author: |
Frank D |
Year: |
1999 |
Journal: |
Mamm Genome |
Title: |
A novel pleckstrin homology-related gene family defined by Ipl/Tssc3, TDAG51, and Tih1: tissue-specific expression, chromosomal location, and parental imprinting. |
Volume: |
10 |
Issue: |
12 |
Pages: |
1150-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yamazaki K |
Year: |
1998 |
Journal: |
Gene |
Title: |
Cloning of 5'-flanking region and a polymorphic CTT trinucleotide repeat within 5'-untranslated region of mouse R-type calcium channel alpha1-subunit (Cchra1) gene, and its genetic mapping. |
Volume: |
214 |
Issue: |
1-2 |
Pages: |
199-204 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wolstenholme JT |
Year: |
2013 |
Journal: |
Genes Brain Behav |
Title: |
Sexual differentiation in the developing mouse brain: contributions of sex chromosome genes. |
Volume: |
12 |
Issue: |
2 |
Pages: |
166-80 |
|
•
•
•
•
•
|
Publication |
First Author: |
Takada Y |
Year: |
2023 |
Journal: |
Sci Adv |
Title: |
Mature mRNA processing that deletes 3' end sequences directs translational activation and embryonic development. |
Volume: |
9 |
Issue: |
47 |
Pages: |
eadg6532 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhu S |
Year: |
2017 |
Journal: |
Nature |
Title: |
Nlrp9b inflammasome restricts rotavirus infection in intestinal epithelial cells. |
Volume: |
546 |
Issue: |
7660 |
Pages: |
667-670 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ding S |
Year: |
2005 |
Journal: |
Cell |
Title: |
Efficient transposition of the piggyBac (PB) transposon in mammalian cells and mice. |
Volume: |
122 |
Issue: |
3 |
Pages: |
473-83 |
|
•
•
•
•
•
|
Publication |
First Author: |
Fujimoto M |
Year: |
2008 |
Journal: |
J Biol Chem |
Title: |
Analysis of HSF4 binding regions reveals its necessity for gene regulation during development and heat shock response in mouse lenses. |
Volume: |
283 |
Issue: |
44 |
Pages: |
29961-70 |
|
•
•
•
•
•
|
Publication |
First Author: |
Maggi LB Jr |
Year: |
2008 |
Journal: |
Mol Cell Biol |
Title: |
Nucleophosmin serves as a rate-limiting nuclear export chaperone for the Mammalian ribosome. |
Volume: |
28 |
Issue: |
23 |
Pages: |
7050-65 |
|
•
•
•
•
•
|
Publication |
First Author: |
McKee AE |
Year: |
2005 |
Journal: |
BMC Dev Biol |
Title: |
A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain. |
Volume: |
5 |
|
Pages: |
14 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Backcross DNA Panel Mapping Resource |
Year: |
1999 |
Journal: |
Database Release |
Title: |
JAX BSS Panel Mapping Data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Birgit Meldal and Sandra Orchard (1). (1) European Bioinformatics Institute (EBI), Hinxton, Cambridgeshire, United Kingdom |
Year: |
2023 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to homologous complexes by curator judgment of sequence, composition and function similarity |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information Editorial Staff Collaboration |
Year: |
2001 |
|
Title: |
LocusLink Collaboration |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Mouse Synonym Curation |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
Data Curation Using Mouse Genome Assembly |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Hansen J |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. |
Volume: |
100 |
Issue: |
17 |
Pages: |
9918-22 |
|
•
•
•
•
•
|
Publication |
First Author: |
Stryke D |
Year: |
2003 |
Journal: |
Nucleic Acids Res |
Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
Volume: |
31 |
Issue: |
1 |
Pages: |
278-81 |
|
•
•
•
•
•
|
Publication |
First Author: |
International Knockout Mouse Consortium |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of modified allele data from IKMC and creation of new knockout alleles |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Lennon G |
Year: |
1999 |
Journal: |
Database Download |
Title: |
WashU-HHMI Mouse EST Project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GUDMAP Consortium |
Year: |
2004 |
Journal: |
www.gudmap.org |
Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
Year: |
2014 |
Journal: |
Database Release |
Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Hansen GM |
Year: |
2008 |
Journal: |
Genome Res |
Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
Volume: |
18 |
Issue: |
10 |
Pages: |
1670-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Helmholtz Zentrum Muenchen GmbH |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kawai J |
Year: |
2001 |
Journal: |
Nature |
Title: |
Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
Issue: |
6821 |
Pages: |
685-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
Title: |
Nomenclature Committee Use |
|
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
Pages: |
14109-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Cyagen Biosciences Inc. |
Year: |
2022 |
|
Title: |
Cyagen Biosciences Website. |
|
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|
|
•
•
•
•
•
|
Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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|
•
•
•
•
•
|
Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
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|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Cao Y |
Year: |
2023 |
Journal: |
Cell Rep |
Title: |
Virus-induced lncRNA-BTX allows viral replication by regulating intracellular translocation of DHX9 and ILF3 to induce innate escape. |
Volume: |
42 |
Issue: |
10 |
Pages: |
113262 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jain A |
Year: |
2013 |
Journal: |
Nucleic Acids Res |
Title: |
DHX9 helicase is involved in preventing genomic instability induced by alternatively structured DNA in human cells. |
Volume: |
41 |
Issue: |
22 |
Pages: |
10345-57 |
|
•
•
•
•
•
|
Allele |
Name: |
DExH-box helicase 9; targeted mutation 1, Baojun Zhang |
Allele Type: |
Targeted |
Attribute String: |
Conditional ready |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
DHX9 (also known as RNA helicase A) is a multifunctional ATP-dependent nucleic acid helicase that unwinds DNA and RNA in a 3' to 5' direction and plays important roles in many processes, such as DNA replication, transcriptional activation, post-transcriptional RNA regulation, mRNA translation, and RNA-mediated gene silencing [, ]. It contains two double-stranded RNA binding motifs (DSRMs) at the N-terminal region and a DEXH-box helicase domain [].This entry represents the first DSRM motif of DHX9 []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
DHX9 (also known as RNA helicase A) is a multifunctional ATP-dependent nucleic acid helicase that unwinds DNA and RNA in a 3' to 5' direction and plays important roles in many processes, such as DNA replication, transcriptional activation, post-transcriptional RNA regulation, mRNA translation, and RNA-mediated gene silencing [, ]. It contains two double-stranded RNA binding motifs (DSRMs) at the N-terminal region and a DEXH-box helicase domain [].This entry represents the second DSRM motif of DHX9 []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Fu Q |
Year: |
2013 |
Journal: |
Nucleic Acids Res |
Title: |
Structural insights into RISC assembly facilitated by dsRNA-binding domains of human RNA helicase A (DHX9). |
Volume: |
41 |
Issue: |
5 |
Pages: |
3457-70 |
|
•
•
•
•
•
|
Publication |
First Author: |
Aratani S |
Year: |
2001 |
Journal: |
Mol Cell Biol |
Title: |
Dual roles of RNA helicase A in CREB-dependent transcription. |
Volume: |
21 |
Issue: |
14 |
Pages: |
4460-9 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
DHX9 (also known as RNA helicase A) is a multifunctional ATP-dependent nucleic acid helicase that unwinds DNA and RNA in a 3' to 5' direction and plays important roles in many processes, such as DNA replication, transcriptional activation, post-transcriptional RNA regulation, mRNA translation, and RNA-mediated gene silencing [, ]. It contains two double-stranded RNA binding motifs (DSRMs) at the N-terminal region and a DEXH-box helicase domain [].This entry represents the DEXH-box helicase domain of DHX9. This domain contains the ATP-binding region []. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
132
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
459
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Kawai S |
Year: |
2012 |
Journal: |
J Cell Biol |
Title: |
BRCA1 regulates microRNA biogenesis via the DROSHA microprocessor complex. |
Volume: |
197 |
Issue: |
2 |
Pages: |
201-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang B |
Year: |
2023 |
Journal: |
Nucleic Acids Res |
Title: |
ADAR1 links R-loop homeostasis to ATR activation in replication stress response. |
Volume: |
51 |
Issue: |
21 |
Pages: |
11668-11687 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hoekstra EJ |
Year: |
2013 |
Journal: |
PLoS One |
Title: |
LMX1B is part of a transcriptional complex with PSPC1 and PSF. |
Volume: |
8 |
Issue: |
1 |
Pages: |
e53122 |
|
•
•
•
•
•
|
Publication |
First Author: |
Song J |
Year: |
2022 |
Journal: |
Nat Commun |
Title: |
Mutant RIG-I enhances cancer-related inflammation through activation of circRIG-I signaling. |
Volume: |
13 |
Issue: |
1 |
Pages: |
7096 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yang K |
Year: |
2023 |
Journal: |
Cell Death Differ |
Title: |
Long non-coding RNA HIF1A-As2 and MYC form a double-positive feedback loop to promote cell proliferation and metastasis in KRAS-driven non-small cell lung cancer. |
|
|
Pages: |
1-17 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wilson BJ |
Year: |
2007 |
Journal: |
BMC Genomics |
Title: |
Identification of novel pathway partners of p68 and p72 RNA helicases through Oncomine meta-analysis. |
Volume: |
8 |
|
Pages: |
419 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1380
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1383
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1384
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
735
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Tanner NK |
Year: |
2001 |
Journal: |
Mol Cell |
Title: |
DExD/H box RNA helicases: from generic motors to specific dissociation functions. |
Volume: |
8 |
Issue: |
2 |
Pages: |
251-62 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
|
•
•
•
•
•
|