Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:2149733 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2019-02-25 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:1698921 |
Pattern: |
Not Specified |
Stage: |
TS21 |
Assay Id: |
MGI:6279949 |
Age: |
embryonic day 13.5 |
Image: |
4B |
Note: |
Authors report ectopias occurred very rarely in Dscam mutant embryos. |
Specimen Label: |
4B |
|
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:2149733 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2019-02-25 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:1698921 |
Pattern: |
Not Specified |
Stage: |
TS21 |
Assay Id: |
MGI:6279959 |
Age: |
embryonic day 13.5 |
Image: |
4B |
Note: |
Authors report ectopias occurred very rarely in Dscam mutant embryos. |
Specimen Label: |
4B |
|
Specimen Num: |
8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yamagata M |
Year: |
2008 |
Journal: |
Nature |
Title: |
Dscam and Sidekick proteins direct lamina-specific synaptic connections in vertebrate retina. |
Volume: |
451 |
Issue: |
7177 |
Pages: |
465-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Schmucker D |
Year: |
2009 |
Journal: |
Genes Dev |
Title: |
Dscam and DSCAM: complex genes in simple animals, complex animals yet simple genes. |
Volume: |
23 |
Issue: |
2 |
Pages: |
147-56 |
|
•
•
•
•
•
|
Publication |
First Author: |
Brites D |
Year: |
2008 |
Journal: |
Mol Biol Evol |
Title: |
The Dscam homologue of the crustacean Daphnia is diversified by alternative splicing like in insects. |
Volume: |
25 |
Issue: |
7 |
Pages: |
1429-39 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
2013
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
2053
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 26, Michael G Rosenfeld |
Allele Type: |
Transgenic |
Attribute String: |
Epitope tag, Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
Strain |
Attribute String: |
congenic, mutant strain, transgenic |
|
•
•
•
•
•
|
Publication |
First Author: |
Agarwala KL |
Year: |
2001 |
Journal: |
Biochem Biophys Res Commun |
Title: |
Cloning and functional characterization of DSCAML1, a novel DSCAM-like cell adhesion molecule that mediates homophilic intercellular adhesion. |
Volume: |
285 |
Issue: |
3 |
Pages: |
760-72 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cui S |
Year: |
2013 |
Journal: |
Neurosci Lett |
Title: |
Tyrosine phosphorylation is essential for DSCAML1 to promote dendrite arborization of mouse cortical neurons. |
Volume: |
555 |
|
Pages: |
193-7 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
DSCAM and DSCAM-like (DSCAML1) serve diverse neurodevelopmental functions, including axon guidance, synaptic adhesion, and self-avoidance [, , ]. DSCAML1 is a paralogue of DSCAM that has been identified in vertebrates []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Li S |
Year: |
2016 |
Journal: |
PLoS One |
Title: |
Morphological Diversity of the Rod Spherule: A Study of Serially Reconstructed Electron Micrographs. |
Volume: |
11 |
Issue: |
3 |
Pages: |
e0150024 |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 1, Peter Fuerst |
Allele Type: |
Transgenic |
Attribute String: |
Conditional ready, Inserted expressed sequence, Reporter |
|
•
•
•
•
•
|
Strain |
Attribute String: |
mutant stock, transgenic |
|
•
•
•
•
•
|
Publication |
First Author: |
Lah GJ |
Year: |
2014 |
Journal: |
Neuron |
Title: |
Cell-specific alternative splicing of Drosophila Dscam2 is crucial for proper neuronal wiring. |
Volume: |
83 |
Issue: |
6 |
Pages: |
1376-88 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Cell adhesion molecule DSCAM is a cell adhesion molecule that plays a role in axon guidance, self-avoidance and synaptic formation [, , , , ]. It is a receptor for netrin, acting independently of and in collaboration with DCC []. DSCAM is one of the largest Immunoglobulin (Ig) superfamily CAMs, containing 10 Ig domains and six fibronectin type III (FN) repeats [], and contributes to defects in the central nervous system in Down syndrome patients []. Vertebrate DSCAMs differ from Drosophila Dscam1 in that they lack the extensive alternative splicing that occurs in the insect gene []. Drosophila Dscam2 is also alternatively spliced and plays a crucial role in the development of two visual system neurons, monopolar cells L1 and L2 []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry is specific to the insecta, predominantly Drosophila spp. This entry is found in association with , and . The Down syndrome cell adhesion molecule (Dscam) belongs to a family of cell membrane molecules involved in the differentiation of the nervous system. This is the C-terminal cytoplasmic tail region of Dscam. In Drosophila melanogaster (Fruit fly) the gene has at least 59 different transcripts. Dscam may play a role in the nervous and immune systems []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Ahmed G |
Year: |
2011 |
Journal: |
J Neurosci |
Title: |
Draxin inhibits axonal outgrowth through the netrin receptor DCC. |
Volume: |
31 |
Issue: |
39 |
Pages: |
14018-23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Blank M |
Year: |
2011 |
Journal: |
J Neurosci |
Title: |
The Down syndrome critical region regulates retinogeniculate refinement. |
Volume: |
31 |
Issue: |
15 |
Pages: |
5764-76 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dunlevy L |
Year: |
2010 |
Journal: |
Cardiovasc Res |
Title: |
Down's syndrome-like cardiac developmental defects in embryos of the transchromosomic Tc1 mouse. |
Volume: |
88 |
Issue: |
2 |
Pages: |
287-95 |
|
•
•
•
•
•
|
Publication |
First Author: |
Emili M |
Year: |
2024 |
Journal: |
Neuropharmacology |
Title: |
Reversal of neurodevelopmental impairment and cognitive enhancement by pharmacological intervention with the polyphenol polydatin in a Down syndrome model. |
Volume: |
261 |
|
Pages: |
110170 |
|
•
•
•
•
•
|
Publication |
First Author: |
Xue Y |
Year: |
2015 |
Journal: |
Behav Brain Res |
Title: |
Genetic variability to diet-induced hippocampal dysfunction in BXD recombinant inbred (RI) mouse strains. |
Volume: |
292 |
|
Pages: |
83-94 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhu K |
Year: |
2011 |
Journal: |
Neurosci Bull |
Title: |
Down syndrome cell adhesion molecule and its functions in neural development. |
Volume: |
27 |
Issue: |
1 |
Pages: |
45-52 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shao Q |
Year: |
2017 |
Journal: |
J Neurosci |
Title: |
Uncoupling of UNC5C with Polymerized TUBB3 in Microtubules Mediates Netrin-1 Repulsion. |
Volume: |
37 |
Issue: |
23 |
Pages: |
5620-5633 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lefebvre JL |
Year: |
2012 |
Journal: |
Nature |
Title: |
Protocadherins mediate dendritic self-avoidance in the mammalian nervous system. |
Volume: |
488 |
Issue: |
7412 |
Pages: |
517-21 |
|
•
•
•
•
•
|
Publication |
First Author: |
Qu C |
Year: |
2013 |
Journal: |
J Biol Chem |
Title: |
c-Jun N-terminal kinase 1 (JNK1) is required for coordination of netrin signaling in axon guidance. |
Volume: |
288 |
Issue: |
3 |
Pages: |
1883-95 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
728
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
168
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
272
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
175
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
117
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
161
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
354
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
169
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
178
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
154
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
78
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
114
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Smalla KH |
Year: |
2000 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
The synaptic glycoprotein neuroplastin is involved in long-term potentiation at hippocampal CA1 synapses. |
Volume: |
97 |
Issue: |
8 |
Pages: |
4327-32 |
|
•
•
•
•
•
|
Publication |
First Author: |
Empson RM |
Year: |
2006 |
Journal: |
J Neurochem |
Title: |
The cell adhesion molecule neuroplastin-65 inhibits hippocampal long-term potentiation via a mitogen-activated protein kinase p38-dependent reduction in surface expression of GluR1-containing glutamate receptors. |
Volume: |
99 |
Issue: |
3 |
Pages: |
850-60 |
|
•
•
•
•
•
|
Publication |
First Author: |
Owczarek S |
Year: |
2010 |
Journal: |
FASEB J |
Title: |
Neuroplastin-55 binds to and signals through the fibroblast growth factor receptor. |
Volume: |
24 |
Issue: |
4 |
Pages: |
1139-50 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Neuroplastin and basigin are members of the immunoglobulin (Ig) superfamily. They have two Ig domains that project into the extracellular space. They are also present as isoforms containing an additional N-terminal Ig domain. They contain a glutamate (E) at exactly the same position in the transmembrane domain, which may be important for molecular interactions within the membrane region [].Basigin is present on the surface of tumour cells and stimulate nearby fibroblasts to synthesise matrix metalloproteases (MMPs), which play an important role in tumour invasiveness and metastasis []. Basigin has also been repeatedly implicated in the proper function of the blood brain barrier [, ]. In addition, the protein is essential for fertility in both males and females[]. In males, it is required for the completion of spermatogenesis, while in females, it is needed for maintaining normal reproductive functions. Basigins are highly glycosylated membrane proteins, the degree of glycosylation varying with tissue type. The extracellular region of basigin contains two randomly arranged Ig domains: an Ig-like C2-type domain and an Ig-like V-domain [].Neuroplastin is a probable homophilic and heterophilic cell adhesion molecule involved in long term potentiation at hippocampal excitatory synapses through activation of p38MAPK []. It may also regulate neurite outgrowth by activating the FGFR1 signaling pathway []. It may play a role in synaptic plasticity [].Contactins are cell adhesion molecules that belong to the immunoglobulin superfamily and are involved in neural development []. Contactin-2 (CNTN2/axonin-1/TAG-1/TAX-1) is highly expressed at the axon growth cone and plays an important role in regulating axon guidance and path finding, as well as in neuron migration. Contactin-6 (CNTN6/NB-3) binds Notch and and promotes oligodendrogliogenesis from progenitor cells and differentiation of oligodendrocyte precursor cells.Down syndrome cell adhesion molecule (DSCAM) is a cell adhesion molecule that plays a role in axon guidance, self-avoidance and synaptic formation []. DSCAM is one of the largest Immunoglobulin (Ig) superfamily CAMs [], and contributes to defects in the central nervous system in Down syndrome patients [].This entry represents a family of neuronal cell adhesion molecules that belong to the immunoglobulin superfamily and are involved in neural development. |
|
•
•
•
•
•
|
Publication |
First Author: |
Miyauchi T |
Year: |
1990 |
Journal: |
J Biochem |
Title: |
Basigin, a new, broadly distributed member of the immunoglobulin superfamily, has strong homology with both the immunoglobulin V domain and the beta-chain of major histocompatibility complex class II antigen. |
Volume: |
107 |
Issue: |
2 |
Pages: |
316-23 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
655
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
422
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Beesley PW |
Year: |
2014 |
Journal: |
J Neurochem |
Title: |
The Neuroplastin adhesion molecules: key regulators of neuronal plasticity and synaptic function. |
Volume: |
131 |
Issue: |
3 |
Pages: |
268-83 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kanekura T |
Year: |
2002 |
Journal: |
Int J Cancer |
Title: |
Basigin (CD147) is expressed on melanoma cells and induces tumor cell invasion by stimulating production of matrix metalloproteinases by fibroblasts. |
Volume: |
99 |
Issue: |
4 |
Pages: |
520-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Seulberger H |
Year: |
1990 |
Journal: |
EMBO J |
Title: |
The inducible blood--brain barrier specific molecule HT7 is a novel immunoglobulin-like cell surface glycoprotein. |
Volume: |
9 |
Issue: |
7 |
Pages: |
2151-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Seulberger H |
Year: |
1992 |
Journal: |
Neurosci Lett |
Title: |
HT7, Neurothelin, Basigin, gp42 and OX-47--many names for one developmentally regulated immuno-globulin-like surface glycoprotein on blood-brain barrier endothelium, epithelial tissue barriers and neurons. |
Volume: |
140 |
Issue: |
1 |
Pages: |
93-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kuno N |
Year: |
1998 |
Journal: |
FEBS Lett |
Title: |
Female sterility in mice lacking the basigin gene, which encodes a transmembrane glycoprotein belonging to the immunoglobulin superfamily. |
Volume: |
425 |
Issue: |
2 |
Pages: |
191-4 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
727
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
365
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
915
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
582
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
81
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Mohebiany AN |
Year: |
2014 |
Journal: |
Adv Neurobiol |
Title: |
New insights into the roles of the contactin cell adhesion molecules in neural development. |
Volume: |
8 |
|
Pages: |
165-94 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1723
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
875
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
2111
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
122
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1451
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
400
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
219
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
220
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
285
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
428
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
286
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
297
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
197
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
175
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
389
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
330
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
607
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
397
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
330
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
410
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
473
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
275
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
594
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
277
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
536
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
257
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
671
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
671
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
193
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
593
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
232
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
221
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
537
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1531
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
330
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
218
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
330
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1026
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1209
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1191
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1240
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1347
 |
Fragment?: |
false |
|
•
•
•
•
•
|