| Type |
Details |
Score |
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1755823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_06 |
|
| Specimen Label: |
euxassay_006295_06 |
| Detected: |
true |
| Specimen Num: |
6 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1755823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_07 |
|
| Specimen Label: |
euxassay_006295_07 |
| Detected: |
true |
| Specimen Num: |
7 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1755823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_08 |
|
| Specimen Label: |
euxassay_006295_08 |
| Detected: |
true |
| Specimen Num: |
8 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1755823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_09 |
|
| Specimen Label: |
euxassay_006295_09 |
| Detected: |
true |
| Specimen Num: |
9 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1755823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_10 |
|
| Specimen Label: |
euxassay_006295_10 |
| Detected: |
true |
| Specimen Num: |
10 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1755823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_11 |
|
| Specimen Label: |
euxassay_006295_11 |
| Detected: |
true |
| Specimen Num: |
11 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1755823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_12 |
|
| Specimen Label: |
euxassay_006295_12 |
| Detected: |
true |
| Specimen Num: |
12 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1755823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_13 |
|
| Specimen Label: |
euxassay_006295_13 |
| Detected: |
true |
| Specimen Num: |
13 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1755823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_14 |
|
| Specimen Label: |
euxassay_006295_14 |
| Detected: |
true |
| Specimen Num: |
14 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1755823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_15 |
|
| Specimen Label: |
euxassay_006295_15 |
| Detected: |
true |
| Specimen Num: |
15 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1755823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_16 |
|
| Specimen Label: |
euxassay_006295_16 |
| Detected: |
true |
| Specimen Num: |
16 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1755823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_17 |
|
| Specimen Label: |
euxassay_006295_17 |
| Detected: |
true |
| Specimen Num: |
17 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3689565 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-12-01 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1618412 |
| Pattern: |
Not Specified |
| Stage: |
TS12 |
| Assay Id: |
MGI:3689513 |
| Age: |
embryonic day 8.0 |
| Image: |
2A |
|
| Specimen Label: |
2A |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3689565 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-12-01 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1618412 |
| Pattern: |
Regionally restricted |
| Stage: |
TS12 |
| Assay Id: |
MGI:3689513 |
| Age: |
embryonic day 8.0 |
| Image: |
2B |
| Note: |
Expression is in the earliest forming somites at the dorsal lip with expression extending ventrally along the rostral and caudal lips. |
| Specimen Label: |
2B |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3689565 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-12-01 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1618415 |
| Pattern: |
Not Specified |
| Stage: |
TS15 |
| Assay Id: |
MGI:3689513 |
| Age: |
embryonic day 9.5 |
| Image: |
2C |
|
| Specimen Label: |
2C |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3689565 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-12-01 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1618415 |
| Pattern: |
Regionally restricted |
| Stage: |
TS15 |
| Assay Id: |
MGI:3689513 |
| Age: |
embryonic day 9.5 |
| Image: |
3A |
| Note: |
Expression in the earliest somites occurred throughout the inner edge of the somitic epithelium and was stronger dorsally. In slightly more mature somites, expression had decreased throughout the epithelium and increased at the somitic lips. |
| Specimen Label: |
3A |
| Detected: |
true |
| Specimen Num: |
9 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3689565 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-12-01 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1618417 |
| Pattern: |
Regionally restricted |
| Stage: |
TS17 |
| Assay Id: |
MGI:3689513 |
| Age: |
embryonic day 10.5 |
| Image: |
3B |
| Note: |
Expression in the earliest somites occurred throughout the inner edge of the somitic epithelium and was stronger dorsally. In slightly more mature somites, expression had decreased throughout the epithelium and increased at the somitic lips. |
| Specimen Label: |
3B |
| Detected: |
true |
| Specimen Num: |
10 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3689565 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-12-01 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1618417 |
| Pattern: |
Regionally restricted |
| Stage: |
TS17 |
| Assay Id: |
MGI:3689513 |
| Age: |
embryonic day 10.5 |
| Image: |
3Bi |
| Note: |
Expression in the earliest somites occurred throughout the inner edge of the somitic epithelium and was stronger dorsally. |
| Specimen Label: |
3Bi |
| Detected: |
true |
| Specimen Num: |
13 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3689565 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-12-01 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1618417 |
| Pattern: |
Regionally restricted |
| Stage: |
TS17 |
| Assay Id: |
MGI:3689513 |
| Age: |
embryonic day 10.5 |
| Image: |
3Bii |
| Note: |
In slightly more mature somites, expression had decreased throughout the epithelium and increased at the somitic lips. |
| Specimen Label: |
3Bii |
| Detected: |
true |
| Specimen Num: |
14 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3689565 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-12-01 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1618417 |
| Pattern: |
Not Specified |
| Stage: |
TS17 |
| Assay Id: |
MGI:3689513 |
| Age: |
embryonic day 10.5 |
| Image: |
3Biii |
|
| Specimen Label: |
3Biii |
| Detected: |
true |
| Specimen Num: |
15 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2020-01-30 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1654015 |
| Pattern: |
Not Specified |
| Stage: |
TS15 |
| Assay Id: |
MGI:6386964 |
| Age: |
embryonic day 9.5 |
| Image: |
3F |
|
| Specimen Label: |
3F |
| Detected: |
true |
| Specimen Num: |
10 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2020-01-30 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1654015 |
| Pattern: |
Not Specified |
| Stage: |
TS15 |
| Assay Id: |
MGI:6386964 |
| Age: |
embryonic day 9.5 |
| Image: |
3F' |
|
| Specimen Label: |
3F' |
| Detected: |
true |
| Specimen Num: |
11 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3689565 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-12-01 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1609817 |
| Pattern: |
Not Specified |
| Stage: |
TS17 |
| Assay Id: |
MGI:3689513 |
| Age: |
embryonic day 10.5 |
| Image: |
2Dii |
|
| Specimen Label: |
2Dii |
| Detected: |
true |
| Specimen Num: |
7 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3689565 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-12-01 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1609818 |
| Pattern: |
Not Specified |
| Stage: |
TS18 |
| Assay Id: |
MGI:3689513 |
| Age: |
embryonic day 11.0 |
| Image: |
2E |
|
| Specimen Label: |
2E |
| Detected: |
true |
| Specimen Num: |
5 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1763923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_05 |
|
| Specimen Label: |
euxassay_006295_05 |
| Detected: |
true |
| Specimen Num: |
5 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1763923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_06 |
|
| Specimen Label: |
euxassay_006295_06 |
| Detected: |
true |
| Specimen Num: |
6 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1791823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_13 |
|
| Specimen Label: |
euxassay_006295_13 |
| Detected: |
true |
| Specimen Num: |
13 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1791823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_14 |
|
| Specimen Label: |
euxassay_006295_14 |
| Detected: |
true |
| Specimen Num: |
14 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1791823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_15 |
|
| Specimen Label: |
euxassay_006295_15 |
| Detected: |
true |
| Specimen Num: |
15 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1984983 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1791823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824881 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_006295_18 |
|
| Specimen Label: |
euxassay_006295_18 |
| Detected: |
true |
| Specimen Num: |
18 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Sheehan S |
| Year: |
2007 |
| Journal: |
Am J Physiol Renal Physiol |
| Title: |
Genetic analysis of albuminuria in a cross between C57BL/6J and DBA/2J mice. |
| Volume: |
293 |
| Issue: |
5 |
| Pages: |
F1649-56 |
|
•
•
•
•
•
|
| Publication |
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Yu Y |
| Year: |
2016 |
| Journal: |
Neurosci Bull |
| Title: |
Yeast Two-Hybrid Screening for Proteins that Interact with the Extracellular Domain of Amyloid Precursor Protein. |
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32 |
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2 |
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171-6 |
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•
•
•
•
•
|
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Zhou Z |
| Year: |
2023 |
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Front Cell Dev Biol |
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Single-cell analysis reveals specific neuronal transition during mouse corticogenesis. |
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11 |
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1209320 |
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•
•
•
•
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Tanabe K |
| Year: |
2003 |
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J Neurosci |
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Fibroblast growth factor-inducible-14 is induced in axotomized neurons and promotes neurite outgrowth. |
| Volume: |
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29 |
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9675-86 |
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•
•
•
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| Publication |
| First Author: |
Okazaki N |
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2003 |
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DNA Res |
| Title: |
Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. |
| Volume: |
10 |
| Issue: |
4 |
| Pages: |
167-80 |
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•
•
•
•
•
|
| Publication |
| First Author: |
Despin-Guitard E |
| Year: |
2024 |
| Journal: |
Nat Commun |
| Title: |
Non-apical mitoses contribute to cell delamination during mouse gastrulation. |
| Volume: |
15 |
| Issue: |
1 |
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•
•
•
•
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| Publication |
| First Author: |
Liakath-Ali K |
| Year: |
2024 |
| Journal: |
PLoS Biol |
| Title: |
Cartography of teneurin and latrophilin expression reveals spatiotemporal axis heterogeneity in the mouse hippocampus during development. |
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22 |
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5 |
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e3002599 |
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•
•
•
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| Publication |
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van den Berghe V |
| Year: |
2013 |
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Neuron |
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Directed migration of cortical interneurons depends on the cell-autonomous action of Sip1. |
| Volume: |
77 |
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1 |
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70-82 |
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•
•
•
•
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| Publication |
| First Author: |
He L |
| Year: |
2021 |
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PRDM16 regulates a temporal transcriptional program to promote progression of cortical neural progenitors. |
| Volume: |
148 |
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6 |
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•
•
•
•
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| Publication |
| First Author: |
Willnow D |
| Year: |
2021 |
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Nature |
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Quantitative lineage analysis identifies a hepato-pancreato-biliary progenitor niche. |
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Lexicon Genetics, Inc |
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Database Download |
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MGI download of Lexicon knockout data |
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The Gene Ontology Consortium |
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2016 |
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Velocigene |
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2008 |
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MGI Direct Data Submission |
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Wellcome Trust Sanger Institute |
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2009 |
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MGI Direct Data Submission |
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Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute |
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Hansen GM |
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2008 |
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Genome Res |
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Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
| Volume: |
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Helmholtz Zentrum Muenchen GmbH |
| Year: |
2010 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
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The Gene Ontology Consortium |
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2014 |
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Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
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UniProt-GOA |
| Year: |
2012 |
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| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
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| Title: |
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Kawai J |
| Year: |
2001 |
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Nature |
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Functional annotation of a full-length mouse cDNA collection. |
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GemPharmatech |
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2011 |
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Nature |
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A conditional knockout resource for the genome-wide study of mouse gene function. |
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| First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
| Year: |
2008 |
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| Title: |
Mouse Gene Trap Data Load from dbGSS |
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AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
| Year: |
2011 |
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| Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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GOA curators |
| Year: |
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Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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The Jackson Laboratory Mouse Radiation Hybrid Database |
| Year: |
2004 |
| Journal: |
Database Release |
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Mouse T31 Radiation Hybrid Data Load |
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Okazaki Y |
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| Volume: |
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Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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| Year: |
2011 |
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PLoS Biol |
| Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
| Volume: |
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Mouse Genome Informatics Scientific Curators |
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2002 |
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| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2010 |
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Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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MGI Genome Annotation Group and UniGene Staff |
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Database Download |
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2010 |
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Allen Institute for Brain Science |
| Year: |
2004 |
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Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
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Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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| First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
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| First Author: |
Mouse Genome Informatics Group |
| Year: |
2003 |
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Database Procedure |
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Automatic Encodes (AutoE) Reference |
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| First Author: |
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| Year: |
1999 |
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Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
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Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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| First Author: |
Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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|
•
•
•
•
•
|
| UniProt Feature |
| Begin: |
29 |
| Description: |
Leucine-rich repeat transmembrane protein FLRT3 |
| Type: |
chain |
| End: |
649 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Karaulanov E |
| Year: |
2009 |
| Journal: |
PLoS One |
| Title: |
Unc5B interacts with FLRT3 and Rnd1 to modulate cell adhesion in Xenopus embryos. |
| Volume: |
4 |
| Issue: |
5 |
| Pages: |
e5742 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
649
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Allele |
| Name: |
fibronectin leucine rich transmembrane protein 3; targeted mutation 3, Rudiger Klein |
| Allele Type: |
Targeted |
| Attribute String: |
Inducible, Recombinase |
|
•
•
•
•
•
|
| DO Term |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Flrt3/Flrt3<+> |
| Background: |
Not Specified |
| Zygosity: |
ht |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
O'Sullivan ML |
| Year: |
2014 |
| Journal: |
Neural Dev |
| Title: |
LPHN3, a presynaptic adhesion-GPCR implicated in ADHD, regulates the strength of neocortical layer 2/3 synaptic input to layer 5. |
| Volume: |
9 |
|
| Pages: |
7 |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Flrt3/Flrt3<+> Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> |
| Background: |
involves: 129S6/SvEvTac * C57BL/6NCrl |
| Zygosity: |
cn |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lu YC |
| Year: |
2015 |
| Journal: |
Structure |
| Title: |
Structural Basis of Latrophilin-FLRT-UNC5 Interaction in Cell Adhesion. |
| Volume: |
23 |
| Issue: |
9 |
| Pages: |
1678-91 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
Latrophilins are a family of secretin-like GPCRs that can be subdividedinto 3 subtypes: Latrophilin-1 (LPH1), -2 (LPH2), and -3 (LPH3). LPH1 is a brain-specific calcium independent receptor of alpha-latrotoxin (LTX), a neurotoxin present in black widow spider venom which triggers massive exocytosis from presynaptic nerve terminals [, ]. It is the affinity of this form of the receptor for LTX that gives the family its name.Two endogenous ligands for latrophilins have been described, teneurin-2 []and FLRT3 []. LPH1 has been shown to bind Lasso (a splice variant of teneurin-2). LPH1 and Lasso interact across intercellular and synaptic junctions, suggesting an involvement in synaptic functions []. Latrophilins are potential synaptic cell-adhesion molecules that interact trans-synaptically with teneurins and FLRTs []. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Boucard AA |
| Year: |
2014 |
| Journal: |
J Biol Chem |
| Title: |
Latrophilins function as heterophilic cell-adhesion molecules by binding to teneurins: regulation by alternative splicing. |
| Volume: |
289 |
| Issue: |
1 |
| Pages: |
387-402 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Südhof TC |
| Year: |
2001 |
| Journal: |
Annu Rev Neurosci |
| Title: |
alpha-Latrotoxin and its receptors: neurexins and CIRL/latrophilins. |
| Volume: |
24 |
|
| Pages: |
933-62 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Krasnoperov VG |
| Year: |
1997 |
| Journal: |
Neuron |
| Title: |
alpha-Latrotoxin stimulates exocytosis by the interaction with a neuronal G-protein-coupled receptor. |
| Volume: |
18 |
| Issue: |
6 |
| Pages: |
925-37 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Silva JP |
| Year: |
2011 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Latrophilin 1 and its endogenous ligand Lasso/teneurin-2 form a high-affinity transsynaptic receptor pair with signaling capabilities. |
| Volume: |
108 |
| Issue: |
29 |
| Pages: |
12113-8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Arcos-Burgos M |
| Year: |
2010 |
| Journal: |
Mol Psychiatry |
| Title: |
A common variant of the latrophilin 3 gene, LPHN3, confers susceptibility to ADHD and predicts effectiveness of stimulant medication. |
| Volume: |
15 |
| Issue: |
11 |
| Pages: |
1053-66 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Doyle SE |
| Year: |
2006 |
| Journal: |
Dev Dyn |
| Title: |
Latrophilin-2 is a novel component of the epithelial-mesenchymal transition within the atrioventricular canal of the embryonic chicken heart. |
| Volume: |
235 |
| Issue: |
12 |
| Pages: |
3213-21 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Silva JP |
| Year: |
2010 |
| Journal: |
Adv Exp Med Biol |
| Title: |
The latrophilins, "split-personality" receptors. |
| Volume: |
706 |
|
| Pages: |
59-75 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
Latrophilins are a family of secretin-like GPCRs that can be subdividedinto 3 subtypes: LPH1, LPH2 and LPH3. LPH1 is a brain-specific calciumindependent receptor of alpha-latrotoxin (LTX), a neurotoxin. It is the affinity of this form of the receptor for LTX that gives the family its name. LPH2 and LPH3, whilst sharing extensive sequence similarity to LPH1, do not bind LTX. LPH2 is distributed throughout most tissues, whereas LPH3 is also brain-specific []. The endogenous ligand(s) for these receptors are at present unknown. Binding of LTX to LPH1 stimulates exocytosis and the subsequent release of large amounts of neurotransmitters from neuronal and endocrine cells. The latrophilins possess up to 7 sites of alternative splicing; the resulting number of possible splice variants leads to a highly variable family of proteins.Structurally, these proteins have a seven-transmembrane region and a large extracellular N-terminal region which consists of several domains: a rhamnose binding lectin (RBL) domain, an olfactomedin-like (OLF) domain followed by a Serine/Threonine rich domain that is O-linked glycosylated, a hormone binding (HR) domain; and a GPCR Autoproteolysis INducing (GAIN) domain [].This entry represents latrophilin-3 (LPH3). It plays a role in cell-cell adhesion, neuron guidance and in the development of glutamatergic synapses in the cortex through interaction with FLRT3 []. A common variant of the latrophilin 3 gene confers susceptibility to Attention-Deficit/Hyperactivity Disorder (ADHD) []. |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
Latrophilins are a family of secretin-like GPCRs that can be subdividedinto 3 subtypes: Latrophilin-1 (LPH1), -2 (LPH2), and -3 (LPH3). LPH1 is a brain-specific calcium independent receptor of alpha-latrotoxin (LTX), a neurotoxin present in black widow spider venom which triggers massive exocytosis from presynaptic nerve terminals [, ]. It is the affinity of this form of the receptor for LTX that gives the family its name.Two endogenous ligands for latrophilins have been described, teneurin-2 []and FLRT3 []. LPH1 has been shown to bind Lasso (a splice variant of teneurin-2). LPH1 and Lasso interact across intercellular and synaptic junctions, suggesting an involvement in synaptic functions []. Latrophilins are potential synaptic cell-adhesion molecules that interact trans-synaptically with teneurins and FLRTs []. LPH2 and LPH3, whilst sharing extensive sequence similarity to LPH1, do not bind LTX. LPH1 and LPH3 are expressed in neurons, while LPH2 is ubiquitous []. LPH2 is a component of the epithelial-mesenchymal transition in the heart []and may be involved in breast cancer []. This entry refers to both latrophilin-2. |
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•
•
•
•
•
|