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Search results 401 to 481 out of 481 for Pif1

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Type Details Score
Publication
- | J:80155
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
34321999 | J:313619
 
First Author: Bedogni F
Year: 2021
Journal: Front Mol Neurosci
Title: Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development.
Volume: 14
Pages: 686034
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
- | J:72247
       
First Author: DDB, FB, MGI, GOA, ZFIN curators
Year: 2001
Title: Gene Ontology annotation through association of InterPro records with GO terms
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Publication
- | J:342604
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Protein
D3YZ87
Organism: Mus musculus/domesticus
Length: 144  
Fragment?: true
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Gene
734585 | pif1.L
Type: gene
Organism: frog, African clawed
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Publication
16522649 | -
First Author: Zhang DH
Year: 2006
Journal: Nucleic Acids Res
Title: The human Pif1 helicase, a potential Escherichia coli RecD homologue, inhibits telomerase activity.
Volume: 34
Issue: 5
Pages: 1393-404
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Allele
Pif1<+> | MGI:3691327
 
Name: PIF1 5'-to-3' DNA helicase; wild type
Allele Type: Not Specified
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Publication
18591656 | -
First Author: Moon J
Year: 2008
Journal: Proc Natl Acad Sci U S A
Title: PIF1 directly and indirectly regulates chlorophyll biosynthesis to optimize the greening process in Arabidopsis.
Volume: 105
Issue: 27
Pages: 9433-8
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Allele
Pif1<tm1Leah> | MGI:3699312
Name: PIF1 5'-to-3' DNA helicase; targeted mutation 1, Lea Harrington
Allele Type: Targeted
Attribute String: Null/knockout
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Allele
Pif1<Gt(OST212192)Lex> | MGI:4234716
 
Name: PIF1 5'-to-3' DNA helicase; gene trap OST212192, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Pif1<Gt(OST232504)Lex> | MGI:4243014
 
Name: PIF1 5'-to-3' DNA helicase; gene trap OST232504, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Pif1<Gt(OST273881)Lex> | MGI:4259194
 
Name: PIF1 5'-to-3' DNA helicase; gene trap OST273881, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Pif1<Gt(OST273882)Lex> | MGI:4259195
 
Name: PIF1 5'-to-3' DNA helicase; gene trap OST273882, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Pif1<Gt(OST292155)Lex> | MGI:4267696
 
Name: PIF1 5'-to-3' DNA helicase; gene trap OST292155, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Pif1<Gt(OST327745)Lex> | MGI:4281982
 
Name: PIF1 5'-to-3' DNA helicase; gene trap OST327745, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Pif1<Gt(H32B)Rul> | MGI:4832446
 
Name: PIF1 5'-to-3' DNA helicase; gene trap H32B, H Earl Ruley
Allele Type: Gene trapped
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Allele
Pif1<Gt(31B)Rul> | MGI:4832490
 
Name: PIF1 5'-to-3' DNA helicase; gene trap 31B, H Earl Ruley
Allele Type: Gene trapped
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Allele
Pif1<tm1(KOMP)Vlcg> | MGI:5286499
Name: PIF1 5'-to-3' DNA helicase; targeted mutation 1, Velocigene
Allele Type: Targeted
Attribute String: Null/knockout, Reporter
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Publication
12058079 | -
First Author: Zhou JQ
Year: 2002
Journal: Mol Biol Cell
Title: Schizosaccharomyces pombe pfh1+ encodes an essential 5' to 3' DNA helicase that is a member of the PIF1 subfamily of DNA helicases.
Volume: 13
Issue: 6
Pages: 2180-91
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Strain
MGI:3699945 | B6.129P2-Pif1<tm1Leah>
Attribute String: targeted mutation, mutant strain, congenic
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Allele
Pif1<Gt(E170G11)Wrst> | MGI:3916916
 
Name: PIF1 5'-to-3' DNA helicase; gene trap E170G11, German Gene Trap Consortium
Allele Type: Gene trapped
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Allele
Pif1<Gt(EUCE0231g09)Hmgu> | MGI:4395440
 
Name: PIF1 5'-to-3' DNA helicase; gene trap EUCE0231g09, Helmholtz Zentrum Muenchen GmbH
Allele Type: Gene trapped
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Allele
Pif1<tm1e(EUCOMM)Wtsi> | MGI:4431888
Name: PIF1 5'-to-3' DNA helicase; targeted mutation 1e, Wellcome Trust Sanger Institute
Allele Type: Targeted
Attribute String: Null/knockout, Reporter
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Allele
Pif1<tm1a(EUCOMM)Wtsi> | MGI:4432015
Name: PIF1 5'-to-3' DNA helicase; targeted mutation 1a, Wellcome Trust Sanger Institute
Allele Type: Targeted
Attribute String: Conditional ready, Null/knockout, Reporter
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Allele
Pif1<Gt(IST13406D5)Tigm> | MGI:5174004
 
Name: PIF1 5'-to-3' DNA helicase; gene trap IST13406D5, Texas A&M Institute for Genomic Medicine
Allele Type: Gene trapped
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Allele
Pif1<Gt(IST14455E10)Tigm> | MGI:5234740
 
Name: PIF1 5'-to-3' DNA helicase; gene trap IST14455E10, Texas A&M Institute for Genomic Medicine
Allele Type: Gene trapped
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Allele
Pif1<Gt(IST14505F1)Tigm> | MGI:5240180
 
Name: PIF1 5'-to-3' DNA helicase; gene trap IST14505F1, Texas A&M Institute for Genomic Medicine
Allele Type: Gene trapped
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Allele
Pif1<Gt(IST14601E7)Tigm> | MGI:5245335
 
Name: PIF1 5'-to-3' DNA helicase; gene trap IST14601E7, Texas A&M Institute for Genomic Medicine
Allele Type: Gene trapped
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Allele
Pif1<Gt(IST14998A6)Tigm> | MGI:5274227
 
Name: PIF1 5'-to-3' DNA helicase; gene trap IST14998A6, Texas A&M Institute for Genomic Medicine
Allele Type: Gene trapped
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Genotype
Genotype
Symbol: Pif1/Pif1
Background: B6.129P2-Pif1
Zygosity: hm
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Pif1/Pif1
Background: involves: 129P2/OlaHsd * C57BL/6
Zygosity: hm
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Pif1/Pif1<+>
Background: involves: 129P2/OlaHsd * C57BL/6
Zygosity: ht
Has Mutant Allele: true
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Protein Domain
IPR003840 | DNA_helicase_dom
Type: Domain
Description: This entry represents a domain found in viral DNA replication helicases, bacterial ATP-dependent DNA helicase Pif1 and eukaryotic ATP-dependent DNA helicase PIF7.
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Publication
17172855 | -
First Author: Mateyak MK
Year: 2006
Journal: Cell Cycle
Title: Human PIF helicase is cell cycle regulated and associates with telomerase.
Volume: 5
Issue: 23
Pages: 2796-804
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Publication
10926538 | -
First Author: Zhou J
Year: 2000
Journal: Science
Title: Pif1p helicase, a catalytic inhibitor of telomerase in yeast.
Volume: 289
Issue: 5480
Pages: 771-4
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Publication
18725402 | -
First Author: Pinter SF
Year: 2008
Journal: Mol Cell Biol
Title: The Schizosaccharomyces pombe Pfh1p DNA helicase is essential for the maintenance of nuclear and mitochondrial DNA.
Volume: 28
Issue: 21
Pages: 6594-608
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Protein Domain
IPR010285 | DNA_helicase_pif1-like
Type: Family
Description: This entry includes a group of DNA helicases, including Pif1 and Rrm3 from budding yeasts and Pfh1 from fusion yeast. This entry also includes Pif1 like proteins from prokaryotes and eukaryotes including plants. Pif1 is a DNA helicase conserved from bacteria to humans [, ]. It suppresses both G-quadruplex-associated DNA damage and telomere lengthening. In budding yeast, it exists in two forms, nuclear form and mitochondrial form. Its nuclear form inhibits telomerase, while its mitochondrial form is involved in repair and recombination of mitochondrial DNA [, ]. In budding yeasts, another DNA replicative helicase, Rrm3 is recruited to paused replisomes to promote fork progression throughout nonhistone protein-DNA complexes, naturally occurring impediments that are encountered in each S phase where replication forks pauses []. It shares protein sequence similarities with another DNA helicase, Pif1. However, their functions are different. Rrm3promotes telomere replication, while Pif1 inhibits telomere replication []. They also have opposite effects on replication fork progression in ribosomal DNA [].In fission yeasts, Pfh1 is required for the maintenance of both mitochondrial and nuclear genome stability [, ].
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Publication
10693764 | -
First Author: Ivessa AS
Year: 2000
Journal: Cell
Title: The Saccharomyces Pif1p DNA helicase and the highly related Rrm3p have opposite effects on replication fork progression in ribosomal DNA.
Volume: 100
Issue: 4
Pages: 479-89
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Publication
11747817 | -
First Author: Rajani S
Year: 2001
Journal: Curr Biol
Title: The Arabidopsis myc/bHLH gene ALCATRAZ enables cell separation in fruit dehiscence.
Volume: 11
Issue: 24
Pages: 1914-22
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Publication
10225997 | -
First Author: Alvarez J
Year: 1999
Journal: Development
Title: CRABS CLAW and SPATULA, two Arabidopsis genes that control carpel development in parallel with AGAMOUS.
Volume: 126
Issue: 11
Pages: 2377-86
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Publication
18065691 | -
First Author: Khanna R
Year: 2007
Journal: Plant Cell
Title: The basic helix-loop-helix transcription factor PIF5 acts on ethylene biosynthesis and phytochrome signaling by distinct mechanisms.
Volume: 19
Issue: 12
Pages: 3915-29
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Protein Domain
IPR028880 | Rrm3
Type: Family
Description: This entry represents ATP-dependent DNA helicase Rrm3 from buddingyeasts. It is a 5' to 3' DNA replicative helicase recruited to paused replisomes to promote fork progression throughout nonhistone protein-DNA complexes, naturally occurring impediments that are encountered in each S phase where replication forks pauses []. It shares protein sequence similarities with another DNA helicase, Pif1. However, their functions are different. Rrm3 promotes telomere replication, while Pif1 inhibits telomere replication []. They also have opposite effects on replication fork progression in ribosomal DNA [].
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Protein Domain
IPR031066 | bHLH_ALC-like_plant
Type: Family
Description: This entry represents a group of plant helix-loop-helix (bHLH) transcription factors, including ALC, PIFs (phy-interacting factors) and SPATULA from Arabidopsis [, ]. ALC enables cell separation in fruit dehiscence, the processes in which the fruit opens and releases the seed []. PIF1 regulates chlorophyll biosynthesis to optimise the greening process []. PIF5 is involved in ethylene biosynthesis and phytochrome signalling []. SPATULA plays a role in floral organogenesis [].
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Protein
D6RFC6
Organism: Mus musculus/domesticus
Length: 398  
Fragment?: false
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Publication
12897250 | -
First Author: Toledo-Ortiz G
Year: 2003
Journal: Plant Cell
Title: The Arabidopsis basic/helix-loop-helix transcription factor family.
Volume: 15
Issue: 8
Pages: 1749-70
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Publication
16896230 | -
First Author: Li X
Year: 2006
Journal: Plant Physiol
Title: Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
Volume: 141
Issue: 4
Pages: 1167-84
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Publication
21515910 | -
First Author: Qiao J
Year: 2011
Journal: Plant Cell Physiol
Title: Two novel proteins, MRL7 and its paralog MRL7-L, have essential but functionally distinct roles in chloroplast development and are involved in plastid gene expression regulation in Arabidopsis.
Volume: 52
Issue: 6
Pages: 1017-30
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Publication
23956074 | -
First Author: Yua QB
Year: 2014
Journal: Mol Plant
Title: AtECB1/MRL7, a thioredoxin-like fold protein with disulfide reductase activity, regulates chloroplast gene expression and chloroplast biogenesis in Arabidopsis thaliana.
Volume: 7
Issue: 1
Pages: 206-17
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Publication
21220584 | -
First Author: Yu F
Year: 2011
Journal: Mol Plant
Title: SUPPRESSOR OF VARIEGATION4, a new var2 suppressor locus, encodes a pioneer protein that is required for chloroplast biogenesis.
Volume: 4
Issue: 2
Pages: 229-40
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Publication
24111559 | -
First Author: Powikrowska M
Year: 2014
Journal: Physiol Plant
Title: SVR4 (suppressor of variegation 4) and SVR4-like: two proteins with a role in proper organization of the chloroplast genetic machinery.
Volume: 150
Issue: 3
Pages: 477-92
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Publication
31201314 | -
First Author: Yang EJ
Year: 2019
Journal: Nat Commun
Title: NCP activates chloroplast transcription by controlling phytochrome-dependent dual nuclear and plastidial switches.
Volume: 10
Issue: 1
Pages: 2630
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Protein Domain
IPR044701 | MRL7/MRL7L
Type: Family
Description: This family represents a group of plant thioredoxin-like fold domain-containing proteins, including MRL7 (Protein MESOPHYLL-CELL RNAI LIBRARY LINE 7, also known as Protein EARLY CHLOROPLAST BIOGENESIS 1 (ECB1) or Protein SUPPRESSOR OF VARIEGATION 4 SVR4) and its paralog MRL7L from Arabidopsis. These proteins are required for early chloroplast development and involved in the regulation of plastid gene expression [, , , , ]. They also mediate the degradation of two repressors of chloroplast biogenesis, PIF1 and PIF3 in nucleus []. MRL7L is a necessary component of phytochrome signalling for photosynthesis-associated plastid-encoded genes (PhAPGs) activation [].
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Publication
38530355 | J:348296
 
First Author: Her J
Year: 2024
Journal: J Clin Invest
Title: RNF4 sustains Myc-driven tumorigenesis by facilitating DNA replication.
Volume: 134
Issue: 10
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Publication
24132784 | -
First Author: Qiao J
Year: 2013
Journal: Plant Cell Physiol
Title: PRDA1, a novel chloroplast nucleoid protein, is required for early chloroplast development and is involved in the regulation of plastid gene expression in Arabidopsis.
Volume: 54
Issue: 12
Pages: 2071-84
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Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
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Publication
19468303 | -
First Author: Church DM
Year: 2009
Journal: PLoS Biol
Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.
Volume: 7
Issue: 5
Pages: e1000112
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