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Search results 401 to 500 out of 633 for Suv39h1

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Type Details Score
Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Gene
501653 | Suv39h1-ps1
Type: gene
Organism: rat
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Publication
35768432 | J:344784
First Author: Niborski LL
Year: 2022
Journal: Nat Commun
Title: CD8+T cell responsiveness to anti-PD-1 is epigenetically regulated by Suv39h1 in melanomas.
Volume: 13
Issue: 1
Pages: 3739
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Protein
O54864
Organism: Mus musculus/domesticus
Length: 412  
Fragment?: false
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Publication
30111536 | J:266543
 
First Author: Zhang YL
Year: 2018
Journal: EMBO J
Title: DCAF13 promotes pluripotency by negatively regulating SUV39H1 stability during early embryonic development.
Volume: 37
Issue: 18
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Protein
O54864-2
Organism: Mus musculus/domesticus
Length: 453  
Fragment?: false
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Protein
O54864-3
Organism: Mus musculus/domesticus
Length: 286  
Fragment?: false
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Publication
29317652 | J:257727
First Author: Santos-Barriopedro I
Year: 2018
Journal: Nat Commun
Title: SIRT6-dependent cysteine monoubiquitination in the PRE-SET domain of Suv39h1 regulates the NF-κB pathway.
Volume: 9
Issue: 1
Pages: 101
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Publication
31767831 | J:294344
First Author: Qi L
Year: 2019
Journal: Cell Death Dis
Title: Kindlin-2 suppresses transcription factor GATA4 through interaction with SUV39H1 to attenuate hypertrophy.
Volume: 10
Issue: 12
Pages: 890
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Interaction Experiment
Raurell-Vila H (2017)
Description: An HP1 isoform-specific feedback mechanism regulates Suv39h1 activity under stress conditions.
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Publication
14690609 | -
First Author: Peters AH
Year: 2003
Journal: Mol Cell
Title: Partitioning and plasticity of repressive histone methylation states in mammalian chromatin.
Volume: 12
Issue: 6
Pages: 1577-89
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Publication
14690610 | -
First Author: Rice JC
Year: 2003
Journal: Mol Cell
Title: Histone methyltransferases direct different degrees of methylation to define distinct chromatin domains.
Volume: 12
Issue: 6
Pages: 1591-8
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Publication
28059589 | -
First Author: Raurell-Vila H
Year: 2017
Journal: Epigenetics
Title: An HP1 isoform-specific feedback mechanism regulates Suv39h1 activity under stress conditions.
Volume: 12
Issue: 2
Pages: 166-175
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Publication
16449642 | -
First Author: Carbone R
Year: 2006
Journal: Mol Cell Biol
Title: Recruitment of the histone methyltransferase SUV39H1 and its role in the oncogenic properties of the leukemia-associated PML-retinoic acid receptor fusion protein.
Volume: 26
Issue: 4
Pages: 1288-96
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Allele
Suv39h1<tm2Smoc> | MGI:7292650
Name: suppressor of variegation 3-9 1; targeted mutation 1, Shanghai Model Organisms Center
Allele Type: Targeted
Attribute String: Conditional ready, No functional change
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Strain
MGI:6429620 | C57BL/6JSmoc-Suv39h1<tm2Smoc>/Smoc
Attribute String: coisogenic, mutant strain, targeted mutation
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Publication
12867029 | -
First Author: Lehnertz B
Year: 2003
Journal: Curr Biol
Title: Suv39h-mediated histone H3 lysine 9 methylation directs DNA methylation to major satellite repeats at pericentric heterochromatin.
Volume: 13
Issue: 14
Pages: 1192-200
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Publication
11779497 | J:73587
First Author: Wang H
Year: 2001
Journal: Mol Cell
Title: Purification and functional characterization of a histone H3-lysine 4-specific methyltransferase.
Volume: 8
Issue: 6
Pages: 1207-17
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Publication
17643371 | J:201799
First Author: Zhu F
Year: 2007
Journal: Mol Cell
Title: IKKalpha shields 14-3-3sigma, a G(2)/M cell cycle checkpoint gene, from hypermethylation, preventing its silencing.
Volume: 27
Issue: 2
Pages: 214-27
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Publication
37166978 | J:337960
 
First Author: Gou D
Year: 2023
Journal: J Clin Invest
Title: Gluconeogenic enzyme PCK1 supports S-adenosylmethionine biosynthesis and promotes H3K9me3 modification to suppress hepatocellular carcinoma progression.
Volume: 133
Issue: 13
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Publication
32504071 | J:294159
First Author: Lee JE
Year: 2020
Journal: Commun Biol
Title: Aging increases vulnerability to stress-induced depression via upregulation of NADPH oxidase in mice.
Volume: 3
Issue: 1
Pages: 292
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Publication
15769944 | J:96750
First Author: Liu DX
Year: 2005
Journal: Genes Dev
Title: Regulation of neuron survival and death by p130 and associated chromatin modifiers.
Volume: 19
Issue: 6
Pages: 719-32
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Publication
22123949 | J:180435
First Author: Sen N
Year: 2011
Journal: Proc Natl Acad Sci U S A
Title: Neurotrophin-mediated degradation of histone methyltransferase by S-nitrosylation cascade regulates neuronal differentiation.
Volume: 108
Issue: 50
Pages: 20178-83
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Publication
25088994 | J:220119
First Author: Song TY
Year: 2014
Journal: Biochem Biophys Res Commun
Title: The role of tumor suppressor menin in IL-6 regulation in mouse islet tumor cells.
Volume: 451
Issue: 2
Pages: 308-13
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Publication
12039029 | -
First Author: Alvarez-Venegas R
Year: 2002
Journal: Gene
Title: SET-domain proteins of the Su(var)3-9, E(z) and trithorax families.
Volume: 285
Issue: 1-2
Pages: 25-37
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Publication
10848615 | -
First Author: Firestein R
Year: 2000
Journal: Mol Cell Biol
Title: Set domain-dependent regulation of transcriptional silencing and growth control by SUV39H1, a mammalian ortholog of Drosophila Su(var)3-9.
Volume: 20
Issue: 13
Pages: 4900-9
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Protein Domain
IPR011381 | Histone_H3-K9_MeTrfase
Type: Family
Description: Members of this family trimethylate 'Lys-9' of histone H3 using monomethylated H3 'Lys-9' as substrate. It also weakly methylates histone H1 (in vitro). H3 'Lys-9' trimethylation represents a specific tag for epigenetic transcriptional repression by recruiting HP1 (CBX1, CBX3 and/or CBX5) proteins to methylated histones. This enzyme mainly functions in heterochromatin regions, thereby playing a central role in the establishment of constitutive heterochromatin at pericentric and telomere regions. H3 'Lys-9' trimethylation is also required to direct DNA methylation at pericentric repeats [, , ]. SUV39H1 (the human ortholog) is targeted to histone H3 via its interaction with RB1 and is involved in many processes, such as repression of MYOD1-stimulated differentiation[], regulation of the control switch for exiting the cell cycle and entering differentiation, repression by the PML-RARA fusion protein [], BMP-induced repression, repression of switch recombination to IgA []and regulation of telomere length [, ]. SUV39H1 is a component of the eNoSC (energy-dependent nucleolar silencing) complex, a complex that mediates silencing of rDNA in response to intracellular energy status and acts by recruiting histone-modifying enzymes. The eNoSC complex is able to sense the energy status of cell: upon glucose starvation, elevation of NAD+/NADP+ ratio activates SIRT1, leading to histone H3 deacetylation followed by dimethylation of H3 at 'Lys-9' (H3K9me2) by SUV39H1 and the formation of silent chromatin in the rDNA locus []. The activity of this enzyme has been mapped to the SET domain and the adjacent cysteine-rich regions []. The SET domain was originally identified in Su(var)3-9, E(z) and Trithorax genes in Drosophila melanogaster (Fruit fly) []. The sequence conservation pattern and structure analysis of the SET domain provides clues regarding the possible active site residues of the domain. There are three conserved sequence motifs in most of the SET domains. The N-terminal motif (I) has characteristic glycines. The central motif (II) has a distinct pattern of polar and charged residues (Asn, His). The C-terminal conserved motif (III) has a characteristic dyad of polar residues. It has been shown that deregulated SUV39H1 interferes at multiple levels with mammalian higher-order chromatin organisation []and these properties depend primarily on the SET domain [, ]. Methyltransferases (EC [intenz:2.1.1.-]) constitute an important class of enzymes present in every life form. They transfer a methyl group most frequently from S-adenosyl L-methionine (SAM or AdoMet) to a nucleophilic acceptor such as oxygen leading to S-adenosyl-L-homocysteine (AdoHcy) and a methylated molecule [, , ]. All these enzymes have in common a conserved region of about 130 amino acid residues that allow them to bind SAM []. The substrates that are methylated by these enzymes cover virtually every kind of biomolecules ranging from small molecules, to lipids, proteins and nucleic acids [, , ]. Methyltransferase are therefore involved in many essential cellular processes including biosynthesis, signal transduction, protein repair, chromatin regulation and gene silencing [, , ]. More than 230 families of methyltransferases have been described so far, of which more than 220 use SAM as the methyl donor.
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Publication
28326190 | J:309939
 
First Author: Chen X
Year: 2017
Journal: Cell Discov
Title: Malat1 regulates myogenic differentiation and muscle regeneration through modulating MyoD transcriptional activity.
Volume: 3
Pages: 17002
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Publication
15713663 | J:98783
First Author: Fu M
Year: 2005
Journal: J Biol Chem
Title: Cyclin D1 inhibits peroxisome proliferator-activated receptor gamma-mediated adipogenesis through histone deacetylase recruitment.
Volume: 280
Issue: 17
Pages: 16934-41
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Publication
26695186 | J:243939
First Author: Sakamoto A
Year: 2015
Journal: PLoS One
Title: DNA Methylation in the Exon 1 Region and Complex Regulation of Twist1 Expression in Gastric Cancer Cells.
Volume: 10
Issue: 12
Pages: e0145630
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Publication
21427230 | J:171224
First Author: Leung DC
Year: 2011
Journal: Proc Natl Acad Sci U S A
Title: Lysine methyltransferase G9a is required for de novo DNA methylation and the establishment, but not the maintenance, of proviral silencing.
Volume: 108
Issue: 14
Pages: 5718-23
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Publication
18818693 | J:140558
First Author: Dong KB
Year: 2008
Journal: EMBO J
Title: DNA methylation in ES cells requires the lysine methyltransferase G9a but not its catalytic activity.
Volume: 27
Issue: 20
Pages: 2691-701
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Publication
35947677 | J:345017
First Author: Della Valle F
Year: 2022
Journal: Sci Transl Med
Title: LINE-1 RNA causes heterochromatin erosion and is a target for amelioration of senescent phenotypes in progeroid syndromes.
Volume: 14
Issue: 657
Pages: eabl6057
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Publication
34262135 | J:321945
First Author: Balan S
Year: 2021
Journal: Mol Psychiatry
Title: A loss-of-function variant in SUV39H2 identified in autism-spectrum disorder causes altered H3K9 trimethylation and dysregulation of protocadherin β-cluster genes in the developing brain.
Volume: 26
Issue: 12
Pages: 7550-7559
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Publication
20195544 | J:157897
First Author: Philipot O
Year: 2010
Journal: PLoS One
Title: The core binding factor CBF negatively regulates skeletal muscle terminal differentiation.
Volume: 5
Issue: 2
Pages: e9425
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Publication
25168426 | J:214803
First Author: Pandey M
Year: 2014
Journal: Toxicol Appl Pharmacol
Title: Involvement of EZH2, SUV39H1, G9a and associated molecules in pathogenesis of urethane induced mouse lung tumors: potential targets for cancer control.
Volume: 280
Issue: 2
Pages: 296-304
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Publication
26551685 | J:229833
First Author: Rondinelli B
Year: 2015
Journal: J Clin Invest
Title: Histone demethylase JARID1C inactivation triggers genomic instability in sporadic renal cancer.
Volume: 125
Issue: 12
Pages: 4625-37
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Publication
11242054 | J:230385
First Author: Bannister AJ
Year: 2001
Journal: Nature
Title: Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain.
Volume: 410
Issue: 6824
Pages: 120-4
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Publication
25257467 | J:311557
First Author: Kim HJ
Year: 2014
Journal: Cell Res
Title: Plant homeodomain finger protein 2 promotes bone formation by demethylating and activating Runx2 for osteoblast differentiation.
Volume: 24
Issue: 10
Pages: 1231-49
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Publication
31554420 | J:325202
First Author: Sudhahar V
Year: 2019
Journal: Arterioscler Thromb Vasc Biol
Title: Copper Transporter ATP7A (Copper-Transporting P-Type ATPase/Menkes ATPase) Limits Vascular Inflammation and Aortic Aneurysm Development: Role of MicroRNA-125b.
Volume: 39
Issue: 11
Pages: 2320-2337
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Publication
18485871 | -
First Author: Murayama A
Year: 2008
Journal: Cell
Title: Epigenetic control of rDNA loci in response to intracellular energy status.
Volume: 133
Issue: 4
Pages: 627-39
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Protein Domain
IPR001214 | SET_dom
Type: Domain
Description: The SET domain is a 130 to 140 amino acid, evolutionary well conservedsequence motif that was initially characterised in the Drosophila proteins Su(var)3-9, Enhancer-of-zeste and Trithorax. In addition to these chromosomal proteins modulating gene activities and/or chromatin structure, the SET domain is found in proteins of diverse functions ranging from yeast to mammals, but also including some bacteria and viruses [, ].The SET domains of mammalian SUV39H1 and 2 and fission yeast clr4 have been shown to be necessary for the methylation of lysine-9 in the histone H3 N terminus []. However, this histone methyltransferase (HMTase) activity is probably restricted to a subset of SET domain proteins as it requires the combination of the SET domain with the adjacent cysteine-rich regions, one located N-terminally (pre-SET) and the other posterior to the SET domain (post-SET). Post- and pre- SET regions seem then to play a crucial role when it comes to substrate recognition and enzymatic activity [, ].The structure of the SET domain and the two adjacent regions pre-SET and post-SET have been solved [, , ]. The SET structure is all beta, but consists only in sets of few short strands composing no more than a couple of small sheets. Consequently the SET structure is mostly defined by turns and loops. An unusual feature is that the SET core is made up of two discontinual segments of the primary sequence forming an approximate L shape [, , ]. Two of the most conserved motifs in the SET domain are constituted by (1) a stretch at the C-terminal containing a strictly conserved tyrosine residue and (2) a preceding loop inside which the C-terminal segment passes forming a knot-like structure, but not quite a true knot. These two regions have been proven to be essential for SAM binding and catalysis, particularly the invariant tyrosine where in all likelihood catalysis takes place [, ].
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Protein
Q8K085
Organism: Mus musculus/domesticus
Length: 257  
Fragment?: false
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Protein
Q5XJV7
Organism: Mus musculus/domesticus
Length: 1441  
Fragment?: false
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Protein
X2BYU2
Organism: Mus musculus/domesticus
Length: 186  
Fragment?: true
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Protein
X2BZ12
Organism: Mus musculus/domesticus
Length: 190  
Fragment?: true
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Protein
X2BZC6
Organism: Mus musculus/domesticus
Length: 206  
Fragment?: true
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Protein
X2BYC2
Organism: Mus musculus/domesticus
Length: 173  
Fragment?: true
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Protein
X2BYC3
Organism: Mus musculus/domesticus
Length: 173  
Fragment?: true
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Protein
X2BZ14
Organism: Mus musculus/domesticus
Length: 202  
Fragment?: true
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Publication
9632640 | -
First Author: Huang S
Year: 1998
Journal: J Biol Chem
Title: The PR domain of the Rb-binding zinc finger protein RIZ1 is a protein binding interface and is related to the SET domain functioning in chromatin-mediated gene expression.
Volume: 273
Issue: 26
Pages: 15933-9
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Publication
9487389 | -
First Author: Jenuwein T
Year: 1998
Journal: Cell Mol Life Sci
Title: SET domain proteins modulate chromatin domains in eu- and heterochromatin.
Volume: 54
Issue: 1
Pages: 80-93
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Publication
12372303 | -
First Author: Trievel RC
Year: 2002
Journal: Cell
Title: Structure and catalytic mechanism of a SET domain protein methyltransferase.
Volume: 111
Issue: 1
Pages: 91-103
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Protein
Q9EQQ0
Organism: Mus musculus/domesticus
Length: 477  
Fragment?: false
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Protein
Q3TNH3
Organism: Mus musculus/domesticus
Length: 374  
Fragment?: true
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Protein
A0A0R4J074
Organism: Mus musculus/domesticus
Length: 477  
Fragment?: false
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Protein
A2AC19
Organism: Mus musculus/domesticus
Length: 413  
Fragment?: false
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Protein
F6WB49
Organism: Mus musculus/domesticus
Length: 375  
Fragment?: true
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Protein
Q2YDW7
Organism: Mus musculus/domesticus
Length: 349  
Fragment?: false
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Protein
P58467
Organism: Mus musculus/domesticus
Length: 439  
Fragment?: false
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Protein
Q9CWY3
Organism: Mus musculus/domesticus
Length: 473  
Fragment?: false
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Protein
A2AGX3
Organism: Mus musculus/domesticus
Length: 565  
Fragment?: false
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Protein
A0A5F8MPE3
Organism: Mus musculus/domesticus
Length: 1172  
Fragment?: false
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Protein
A0A0G2JFK5
Organism: Mus musculus/domesticus
Length: 295  
Fragment?: false
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Protein
E9QNB8
Organism: Mus musculus/domesticus
Length: 350  
Fragment?: false
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Protein
D3YXI6
Organism: Mus musculus/domesticus
Length: 364  
Fragment?: false
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Protein
A0A0G2JDY1
Organism: Mus musculus/domesticus
Length: 238  
Fragment?: true
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Protein
Q9D177
Organism: Mus musculus/domesticus
Length: 229  
Fragment?: false
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Protein
A0A3B2WCJ7
Organism: Mus musculus/domesticus
Length: 241  
Fragment?: true
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Protein
G3UZ56
Organism: Mus musculus/domesticus
Length: 87  
Fragment?: true
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Protein
A0A0A6YY77
Organism: Mus musculus/domesticus
Length: 233  
Fragment?: true
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Protein
Q80XM0
Organism: Mus musculus/domesticus
Length: 142  
Fragment?: true
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Protein
A2A7B7
Organism: Mus musculus/domesticus
Length: 169  
Fragment?: true
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Protein
Q9CT28
Organism: Mus musculus/domesticus
Length: 209  
Fragment?: true
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Protein
A0A3B2WB63
Organism: Mus musculus/domesticus
Length: 406  
Fragment?: true
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Protein
A2A929
Organism: Mus musculus/domesticus
Length: 214  
Fragment?: true
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Protein
A0A0N4SUQ8
Organism: Mus musculus/domesticus
Length: 127  
Fragment?: true
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Protein
Q8C2W5
Organism: Mus musculus/domesticus
Length: 152  
Fragment?: true
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Protein
Q3U8K7
Organism: Mus musculus/domesticus
Length: 883  
Fragment?: false
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Protein
Q6Q783
Organism: Mus musculus/domesticus
Length: 468  
Fragment?: false
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Protein
Q8BZ97
Organism: Mus musculus/domesticus
Length: 687  
Fragment?: false
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Protein
Q8VHL1
Organism: Mus musculus/domesticus
Length: 366  
Fragment?: false
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Protein
Q91WC0
Organism: Mus musculus/domesticus
Length: 594  
Fragment?: false
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Protein
Q80UJ9
Organism: Mus musculus/domesticus
Length: 309  
Fragment?: false
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Protein
Q3TYX3
Organism: Mus musculus/domesticus
Length: 416  
Fragment?: false
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Protein
Q8C267
Organism: Mus musculus/domesticus
Length: 713  
Fragment?: false
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Protein
Q80V17
Organism: Mus musculus/domesticus
Length: 849  
Fragment?: false
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Protein
B2RXP3
Organism: Mus musculus/domesticus
Length: 697  
Fragment?: false
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Protein
B4XVN8
Organism: Mus musculus/domesticus
Length: 697  
Fragment?: false
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

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