|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 401 to 500 out of 544 for Tfam

0.522s
Type Details Score
Publication
First Author: Lei Y
Year: 2023
Journal: Cell
Title: Cooperative sensing of mitochondrial DNA by ZBP1 and cGAS promotes cardiotoxicity.
Volume: 186
Issue: 14
Pages: 3013-3032.e22
Publication
First Author: van der Vlist M
Year: 2022
Journal: Neuron
Title: Macrophages transfer mitochondria to sensory neurons to resolve inflammatory pain.
Volume: 110
Issue: 4
Pages: 613-626.e9
Publication    
First Author: Zhang K
Year: 2022
Journal: Elife
Title: Acquisition of cellular properties during alveolar formation requires differential activity and distribution of mitochondria.
Volume: 11
Publication
First Author: Yao Q
Year: 2019
Journal: Dev Cell
Title: Suppressing Mitochondrial Respiration Is Critical for Hypoxia Tolerance in the Fetal Growth Plate.
Volume: 49
Issue: 5
Pages: 748-763.e7
Publication
First Author: Thundathil J
Year: 2005
Journal: Mol Reprod Dev
Title: Molecular control of mitochondrial function in preimplantation mouse embryos.
Volume: 71
Issue: 4
Pages: 405-13
Publication
First Author: Lee KY
Year: 2013
Journal: Diabetes
Title: Lessons on conditional gene targeting in mouse adipose tissue.
Volume: 62
Issue: 3
Pages: 864-74
Publication
First Author: Baris OR
Year: 2011
Journal: Stem Cells
Title: The mitochondrial electron transport chain is dispensable for proliferation and differentiation of epidermal progenitor cells.
Volume: 29
Issue: 9
Pages: 1459-68
Publication
First Author: Gambarotto L
Year: 2022
Journal: J Cachexia Sarcopenia Muscle
Title: Ambra1 deficiency impairs mitophagy in skeletal muscle.
Volume: 13
Issue: 4
Pages: 2211-2224
Publication  
First Author: Khadhraoui N
Year: 2023
Journal: Mol Metab
Title: Hacd2 deficiency in mice leads to an early and lethal mitochondrial disease.
Volume: 69
Pages: 101677
Publication
First Author: Calo E
Year: 2010
Journal: Nature
Title: Rb regulates fate choice and lineage commitment in vivo.
Volume: 466
Issue: 7310
Pages: 1110-4
Publication  
First Author: Son JS
Year: 2022
Journal: EBioMedicine
Title: Maternal exercise intergenerationally drives muscle-based thermogenesis via activation of apelin-AMPK signaling.
Volume: 76
Pages: 103842
Publication
First Author: Gomez-Velazquez M
Year: 2017
Journal: PLoS Genet
Title: CTCF counter-regulates cardiomyocyte development and maturation programs in the embryonic heart.
Volume: 13
Issue: 8
Pages: e1006985
Publication  
First Author: Zhao Q
Year: 2022
Journal: J Cell Sci
Title: Drp1 regulates transcription of ribosomal protein genes in embryonic hearts.
Volume: 135
Issue: 4
Publication
First Author: Lee KM
Year: 2013
Journal: Diabetes
Title: Disruption of the cereblon gene enhances hepatic AMPK activity and prevents high-fat diet-induced obesity and insulin resistance in mice.
Volume: 62
Issue: 6
Pages: 1855-64
Publication
First Author: Alsina D
Year: 2020
Journal: EMBO Mol Med
Title: FBXL4 deficiency increases mitochondrial removal by autophagy.
Volume: 12
Issue: 7
Pages: e11659
Publication
First Author: Chae SA
Year: 2022
Journal: Am J Physiol Regul Integr Comp Physiol
Title: Maternal exercise improves epithelial development of fetal intestine by enhancing apelin signaling and oxidative metabolism.
Volume: 323
Issue: 5
Pages: R728-R738
Publication
First Author: Esteban-Martínez L
Year: 2017
Journal: EMBO J
Title: Programmed mitophagy is essential for the glycolytic switch during cell differentiation.
Volume: 36
Issue: 12
Pages: 1688-1706
Publication
First Author: Carmona MC
Year: 2002
Journal: J Biol Chem
Title: Mitochondrial biogenesis and thyroid status maturation in brown fat require CCAAT/enhancer-binding protein alpha.
Volume: 277
Issue: 24
Pages: 21489-98
Publication  
First Author: Wang F
Year: 2017
Journal: Nat Commun
Title: Protein kinase C-alpha suppresses autophagy and induces neural tube defects via miR-129-2 in diabetic pregnancy.
Volume: 8
Pages: 15182
Publication
First Author: Rajakumari S
Year: 2013
Journal: Cell Metab
Title: EBF2 determines and maintains brown adipocyte identity.
Volume: 17
Issue: 4
Pages: 562-74
Publication
First Author: Raum JC
Year: 2015
Journal: Diabetes
Title: Tshz1 Regulates Pancreatic β-Cell Maturation.
Volume: 64
Issue: 8
Pages: 2905-14
Publication
First Author: Zhang K
Year: 2022
Journal: Nat Commun
Title: mTORC1 signaling facilitates differential stem cell differentiation to shape the developing murine lung and is associated with mitochondrial capacity.
Volume: 13
Issue: 1
Pages: 7252
Publication
First Author: Papanicolaou KN
Year: 2012
Journal: Circ Res
Title: Mitofusins 1 and 2 are essential for postnatal metabolic remodeling in heart.
Volume: 111
Issue: 8
Pages: 1012-26
Publication
First Author: Gómez-Del Arco P
Year: 2016
Journal: Cell Metab
Title: The Chromatin Remodeling Complex Chd4/NuRD Controls Striated Muscle Identity and Metabolic Homeostasis.
Volume: 23
Issue: 5
Pages: 881-92
Publication
First Author: Kiyama T
Year: 2018
Journal: Mol Neurodegener
Title: Essential roles of mitochondrial biogenesis regulator Nrf1 in retinal development and homeostasis.
Volume: 13
Issue: 1
Pages: 56
Publication
First Author: Yoshikawa T
Year: 2006
Journal: Gene Expr Patterns
Title: High-throughput screen for genes predominantly expressed in the ICM of mouse blastocysts by whole mount in situ hybridization.
Volume: 6
Issue: 2
Pages: 213-24
Publication
First Author: Zhou Q
Year: 2007
Journal: Dev Cell
Title: A multipotent progenitor domain guides pancreatic organogenesis.
Volume: 13
Issue: 1
Pages: 103-14
Publication      
First Author: Shanghai Model Organisms Center
Year: 2017
Journal: MGI Direct Data Submission
Title: Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China
Publication
First Author: Chung YC
Year: 2011
Journal: Gene Expr Patterns
Title: Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus.
Volume: 11
Issue: 1-2
Pages: 84-92
Publication
First Author: Mootha VK
Year: 2003
Journal: Cell
Title: Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria.
Volume: 115
Issue: 5
Pages: 629-40
Publication
First Author: Pagliarini DJ
Year: 2008
Journal: Cell
Title: A mitochondrial protein compendium elucidates complex I disease biology.
Volume: 134
Issue: 1
Pages: 112-23
Publication  
First Author: Wiese CB
Year: 2012
Journal: Front Neurosci
Title: A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract.
Volume: 6
Pages: 130
Publication
First Author: Guo G
Year: 2010
Journal: Dev Cell
Title: Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.
Volume: 18
Issue: 4
Pages: 675-85
Publication
First Author: Yokoyama S
Year: 2009
Journal: Dev Cell
Title: A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Volume: 17
Issue: 6
Pages: 836-48
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Mouse Synonym Curation
Publication
First Author: Hansen J
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
Volume: 100
Issue: 17
Pages: 9918-22
Publication
First Author: Gray PA
Year: 2004
Journal: Science
Title: Mouse brain organization revealed through direct genome-scale TF expression analysis.
Volume: 306
Issue: 5705
Pages: 2255-7
Publication
First Author: Thompson CL
Year: 2014
Journal: Neuron
Title: A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Volume: 83
Issue: 2
Pages: 309-323
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data
Publication  
First Author: Bedogni F
Year: 2021
Journal: Front Mol Neurosci
Title: Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development.
Volume: 14
Pages: 686034
Publication      
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
Publication      
First Author: Velocigene
Year: 2008
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals)
Publication      
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
Publication      
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
Publication        
First Author: The Gene Ontology Consortium
Year: 2014
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs
Publication        
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Publication
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
Publication
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
Publication
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
Publication        
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
Publication
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
Publication      
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
Publication        
First Author: Cyagen Biosciences Inc.
Year: 2022
Title: Cyagen Biosciences Website.
Publication        
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Publication        
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
Publication      
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
Publication
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
Publication        
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
Publication
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
Publication      
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
Publication        
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
Publication      
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
Publication      
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
Publication      
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
Publication      
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
Publication      
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
Publication      
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
Publication
First Author: Gauthier BR
Year: 2009
Journal: Cell Metab
Title: PDX1 deficiency causes mitochondrial dysfunction and defective insulin secretion through TFAM suppression.
Volume: 10
Issue: 2
Pages: 110-8
Publication
First Author: Koh JH
Year: 2019
Journal: Diabetes
Title: TFAM Enhances Fat Oxidation and Attenuates High-Fat Diet-Induced Insulin Resistance in Skeletal Muscle.
Volume: 68
Issue: 8
Pages: 1552-1564
Publication
First Author: Fujii M
Year: 2022
Journal: iScience
Title: TFAM expression in brown adipocytes confers obesity resistance by secreting extracellular vesicles that promote self-activation.
Volume: 25
Issue: 9
Pages: 104889
Publication  
First Author: Sierra-Magro A
Year: 2023
Journal: Int J Mol Sci
Title: C/EBPβ Regulates TFAM Expression, Mitochondrial Function and Autophagy in Cellular Models of Parkinson's Disease.
Volume: 24
Issue: 2
Publication
First Author: Ikeda M
Year: 2015
Journal: PLoS One
Title: Overexpression of TFAM or twinkle increases mtDNA copy number and facilitates cardioprotection associated with limited mitochondrial oxidative stress.
Volume: 10
Issue: 3
Pages: e0119687
Publication
First Author: Nishiyama S
Year: 2010
Journal: Biochem Biophys Res Commun
Title: Over-expression of Tfam improves the mitochondrial disease phenotypes in a mouse model system.
Volume: 401
Issue: 1
Pages: 26-31
HT Experiment  
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
Publication
First Author: Key J
Year: 2020
Journal: Neurogenetics
Title: Loss of mitochondrial ClpP, Lonp1, and Tfam triggers transcriptional induction of Rnf213, a susceptibility factor for moyamoya disease.
Volume: 21
Issue: 3
Pages: 187-203
Allele
Name: transcription factor A, mitochondrial; targeted mutation 1, Shanghai Model Organisms Center
Allele Type: Targeted
Attribute String: Conditional ready, No functional change
Strain
Attribute String: coisogenic, targeted mutation, mutant strain
HT Experiment  
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
Allele  
Name: BicC family RNA binding protein 1; juvenile congenital polycystic kidney disease 67 Generoso
Allele Type: Chemically induced (other)
Genotype
Symbol: Bicc1/Bicc1 T(2;10)67Gso/T(2;10)67Gso
Background: involves: 101/Rl * C3H/Rl * C57BL10a/E * SEC/RlGso
Zygosity: cx
Has Mutant Allele: true
HT Experiment
Series Id: GSE83368
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: ArrayExpress
Publication
First Author: Price SJ
Year: 2002
Journal: Cytogenet Genome Res
Title: Characterization of the region containing the jcpk PKD gene on mouse Chromosome 10.
Volume: 98
Issue: 1
Pages: 61-6
Publication
First Author: Chittenden L
Year: 2002
Journal: Genomics
Title: A new mouse model for autosomal recessive polycystic kidney disease.
Volume: 79
Issue: 4
Pages: 499-504
Publication
First Author: Bormuth I
Year: 2013
Journal: J Neurosci
Title: Neuronal basic helix-loop-helix proteins Neurod2/6 regulate cortical commissure formation before midline interactions.
Volume: 33
Issue: 2
Pages: 641-51
Publication  
First Author: Satoh J
Year: 2014
Journal: Dis Markers
Title: RNA-Seq data mining: downregulation of NeuroD6 serves as a possible biomarker for alzheimer's disease brains.
Volume: 2014
Pages: 123165
Publication  
First Author: Li X
Year: 2015
Journal: Sci Rep
Title: Integrated genomic approaches identify major pathways and upstream regulators in late onset Alzheimer's disease.
Volume: 5
Pages: 12393
Publication
First Author: Baxter KK
Year: 2012
Journal: Exp Cell Res
Title: The neurogenic basic helix-loop-helix transcription factor NeuroD6 enhances mitochondrial biogenesis and bioenergetics to confer tolerance of neuronal PC12-NeuroD6 cells to the mitochondrial stressor rotenone.
Volume: 318
Issue: 17
Pages: 2200-14
Protein Domain
Type: Family
Description: Neurogenic differentiation factor 6 (Neurod6) is a basic helix-loop-helix (bHLH) transcription factor involved in the development and maintenance of the nervous system. It regulates cortical commissure formation before midline interactions during corpus callosum development []. Neurod6 possesses mitochondrial biogenic properties by amplifying the mitochondrial DNA content and TFAM expression levels, a key regulator for mitochondrial biogenesis []. Downregulation of NeuroD6 has been linked to Alzheimer's disease [, ].The bHLH (basic Helix-Loop-Helix) proteins contain the bHLH domain that is approximately 60 amino acids long and consists of a DNA-binding basic region followed by two a-helices separated by a variable loop region (HLH). The HLH domain promotes dimerisation, allowing the formation of homo- or heterodimeric complexes between different family members. Many bHLH proteins have been shown to act as transcriptional regulators [].
Publication  
First Author: Li T
Year: 2022
Journal: Neuropharmacology
Title: Mitochondriomics reveals the underlying neuroprotective mechanism of TrkB receptor agonist R13 in the 5×FAD mice.
Volume: 204
Pages: 108899
Publication
First Author: Seibenhener ML
Year: 2013
Journal: Biochim Biophys Acta
Title: A role for sequestosome 1/p62 in mitochondrial dynamics, import and genome integrity.
Volume: 1833
Issue: 3
Pages: 452-9
Publication  
First Author: Kuwabara T
Year: 2021
Journal: Life Sci Alliance
Title: SATB1-dependent mitochondrial ROS production controls TCR signaling in CD4 T cells.
Volume: 4
Issue: 11
Publication  
First Author: Yang L
Year: 2020
Journal: Front Cell Dev Biol
Title: OPA1-Exon4b Binds to mtDNA D-Loop for Transcriptional and Metabolic Modulation, Independent of Mitochondrial Fusion.
Volume: 8
Pages: 180
Publication
First Author: Pellegrini M
Year: 2009
Journal: Biochim Biophys Acta
Title: MTERF2 is a nucleoid component in mammalian mitochondria.
Volume: 1787
Issue: 5
Pages: 296-302
Publication
First Author: Yang W
Year: 2019
Journal: J Endocrinol
Title: Glucagon regulates hepatic mitochondrial function and biogenesis through FOXO1.
Volume: 241
Issue: 3
Pages: 265-278