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Search results 401 to 488 out of 488 for Trim28

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Type Details Score
Publication
21163256 | J:170392
First Author: Herzog M
Year: 2011
Journal: Dev Biol
Title: TIF1β association with HP1 is essential for post-gastrulation development, but not for Sertoli cell functions during spermatogenesis.
Volume: 350
Issue: 2
Pages: 548-58
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Publication
8978696 | J:37212
First Author: Le Douarin B
Year: 1996
Journal: EMBO J
Title: A possible involvement of TIF1 alpha and TIF1 beta in the epigenetic control of transcription by nuclear receptors.
Volume: 15
Issue: 23
Pages: 6701-15
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Publication
11331592 | J:92455
First Author: Hsu SI
Year: 2001
Journal: EMBO J
Title: TRIP-Br: a novel family of PHD zinc finger- and bromodomain-interacting proteins that regulate the transcriptional activity of E2F-1/DP-1.
Volume: 20
Issue: 9
Pages: 2273-85
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Publication
15322135 | J:94471
First Author: Khetchoumian K
Year: 2004
Journal: J Biol Chem
Title: TIF1delta, a novel HP1-interacting member of the transcriptional intermediary factor 1 (TIF1) family expressed by elongating spermatids.
Volume: 279
Issue: 46
Pages: 48329-41
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Publication
28276606 | J:252381
First Author: Kokavec J
Year: 2017
Journal: Stem Cells
Title: The ISWI ATPase Smarca5 (Snf2h) Is Required for Proliferation and Differentiation of Hematopoietic Stem and Progenitor Cells.
Volume: 35
Issue: 6
Pages: 1614-1623
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Publication
7671812 | J:28008
First Author: Harrison SM
Year: 1995
Journal: Development
Title: Isolation of novel tissue-specific genes from cDNA libraries representing the individual tissue constituents of the gastrulating mouse embryo.
Volume: 121
Issue: 8
Pages: 2479-89
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Publication
33548738 | J:327588
 
First Author: Yamada R
Year: 2021
Journal: Biochem Biophys Res Commun
Title: Single-cell transcriptional analysis reveals developmental stage-dependent changes in retinal progenitors in the murine early optic vesicle.
Volume: 543
Pages: 80-86
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Publication
16880268 | J:111226
First Author: Torres-Padilla ME
Year: 2006
Journal: J Cell Biol
Title: Role of TIF1alpha as a modulator of embryonic transcription in the mouse zygote.
Volume: 174
Issue: 3
Pages: 329-38
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Publication
32994318 | J:297493
 
First Author: Matos-Rodrigues GE
Year: 2020
Journal: Dis Model Mech
Title: Progenitor death drives retinal dysplasia and neuronal degeneration in a mouse model of ATRIP-Seckel syndrome.
Volume: 13
Issue: 10
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Publication
28123024 | J:239152
First Author: Enriquez-Rios V
Year: 2017
Journal: J Neurosci
Title: DNA-PKcs, ATM, and ATR Interplay Maintains Genome Integrity during Neurogenesis.
Volume: 37
Issue: 4
Pages: 893-905
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Publication
24793032 | J:212924
First Author: Katyal S
Year: 2014
Journal: Nat Neurosci
Title: Aberrant topoisomerase-1 DNA lesions are pathogenic in neurodegenerative genome instability syndromes.
Volume: 17
Issue: 6
Pages: 813-21
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Publication
31197172 | J:278483
First Author: Shi L
Year: 2019
Journal: Nat Commun
Title: Robust elimination of genome-damaged cells safeguards against brain somatic aneuploidy following Knl1 deletion.
Volume: 10
Issue: 1
Pages: 2588
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Publication
35920200 | J:329968
First Author: Kazi S
Year: 2022
Journal: FASEB J
Title: MRNIP interacts with sex body chromatin to support meiotic progression, spermatogenesis, and male fertility in mice.
Volume: 36
Issue: 9
Pages: e22479
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Publication
24025402 | J:201508
First Author: Daxinger L
Year: 2013
Journal: Genome Biol
Title: An ENU mutagenesis screen identifies novel and known genes involved in epigenetic processes in the mouse.
Volume: 14
Issue: 9
Pages: R96
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Publication
11331580 | J:69273
First Author: Reymond A
Year: 2001
Journal: EMBO J
Title: The tripartite motif family identifies cell compartments.
Volume: 20
Issue: 9
Pages: 2140-51
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Publication
32737294 | J:331939
First Author: Keil JM
Year: 2020
Journal: Nat Commun
Title: Symmetric neural progenitor divisions require chromatin-mediated homologous recombination DNA repair by Ino80.
Volume: 11
Issue: 1
Pages: 3839
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Publication
30208054 | J:265843
First Author: Chowdhury R
Year: 2018
Journal: PLoS One
Title: The Trim family of genes and the retina: Expression and functional characterization.
Volume: 13
Issue: 9
Pages: e0202867
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Publication
14613977 | J:85124
First Author: Sousa-Nunes R
Year: 2003
Journal: Genome Res
Title: Characterizing embryonic gene expression patterns in the mouse using nonredundant sequence-based selection.
Volume: 13
Issue: 12
Pages: 2609-20
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Publication
34921112 | J:319920
 
First Author: Ypsilanti AR
Year: 2021
Journal: Proc Natl Acad Sci U S A
Title: Transcriptional network orchestrating regional patterning of cortical progenitors.
Volume: 118
Issue: 51
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Publication
19865483 | J:154032
First Author: Guo Y
Year: 2009
Journal: PLoS One
Title: Relationships between hematopoiesis and hepatogenesis in the midtrimester fetal liver characterized by dynamic transcriptomic and proteomic profiles.
Volume: 4
Issue: 10
Pages: e7641
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Publication
21150899 | J:167212
First Author: Gibson P
Year: 2010
Journal: Nature
Title: Subtypes of medulloblastoma have distinct developmental origins.
Volume: 468
Issue: 7327
Pages: 1095-9
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Publication
21194568 | J:171293
First Author: Campbell GR
Year: 2011
Journal: Mol Cell Neurosci
Title: Transcription factors expressed in olfactory bulb local progenitor cells revealed by genome-wide transcriptome profiling.
Volume: 46
Issue: 2
Pages: 548-61
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Publication
- | J:342601
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniPathway vocabulary mapping
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Publication
22988430 | J:190636
 
First Author: Wiese CB
Year: 2012
Journal: Front Neurosci
Title: A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract.
Volume: 6
Pages: 130
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Publication
20412781 | J:140465
First Author: Guo G
Year: 2010
Journal: Dev Cell
Title: Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.
Volume: 18
Issue: 4
Pages: 675-85
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Publication
20059953 | J:156017
First Author: Yokoyama S
Year: 2009
Journal: Dev Cell
Title: A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Volume: 17
Issue: 6
Pages: 836-48
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Publication
- | J:81858
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: Data Curation Using Mouse Genome Assembly
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Publication
12904583 | J:85162
First Author: Hansen J
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
Volume: 100
Issue: 17
Pages: 9918-22
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Publication
15618518 | J:91257
First Author: Gray PA
Year: 2004
Journal: Science
Title: Mouse brain organization revealed through direct genome-scale TF expression analysis.
Volume: 306
Issue: 5705
Pages: 2255-7
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Publication
24952961 | J:215487
First Author: Thompson CL
Year: 2014
Journal: Neuron
Title: A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Volume: 83
Issue: 2
Pages: 309-323
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Publication
14681479 | J:122989
First Author: Visel A
Year: 2004
Journal: Nucleic Acids Res
Title: GenePaint.org: an atlas of gene expression patterns in the mouse embryo.
Volume: 32
Issue: Database issue
Pages: D552-6
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Publication
- | J:171409
     
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
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Publication
- | J:238766
     
First Author: Shanghai Model Organisms Center
Year: 2017
Journal: MGI Direct Data Submission
Title: Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China
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Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
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Publication
16602821 | J:162220
First Author: Magdaleno S
Year: 2006
Journal: PLoS Biol
Title: BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Volume: 4
Issue: 4
Pages: e86
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Publication
- | J:78475
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:326541
       
First Author: Cyagen Biosciences Inc.
Year: 2022
Title: Cyagen Biosciences Website.
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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HT Experiment
GSE205478 | TRIM28 modulates progesterone and estrogne signaling in endometrium [mouseD3.5-RNAseq-mm10]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE205480 | TRIM28 modulates progesterone and estrogne signaling in endometrium [mouse-D3.5-scRNAseq]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE166444 | Single cell RNA-seq from Trim28 ovary knockout and wildtype mice ovaries and testis
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE202057 | TRIM28 establishes skeletal stem cell identity and safeguards skeletogenesis (RNA-Seq)
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE202058 | TRIM28 establishes skeletal stem cell identity and safeguards skeletogenesis (scRNA-Seq)
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE87504 | Expression analysis of wt and maternal Trim28 mutant E3.5 embryos
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-MTAB-9809 | RNA-seq of gonadal adipose tissue from male and female Trim28-WT and Trim28 adipose specific KO mice
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: ArrayExpress
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Interaction Experiment
Qin Y (2021)
Description: TRIM28 SUMOylates and stabilizes NLRP3 to facilitate inflammasome activation.
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Interaction Experiment
Moriyama T (2015)
Description: Identification and characterization of a nuclear localization signal of TRIM28 that overlaps with the HP1 box.
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Publication
25960296 | -
First Author: Moriyama T
Year: 2015
Journal: Biochem Biophys Res Commun
Title: Identification and characterization of a nuclear localization signal of TRIM28 that overlaps with the HP1 box.
Volume: 462
Issue: 3
Pages: 201-7
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Protein
Q62318
Organism: Mus musculus/domesticus
Length: 834  
Fragment?: false
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Protein
Q62318-2
Organism: Mus musculus/domesticus
Length: 500  
Fragment?: false
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HT Experiment
GSE166382 | TRIM28-dependent SUMOylation protects the adult ovary from the male pathway (RNA-Seq)
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE81489 | In fetal testis, SOX9 acts on transcription and splicing of its targets genes through binding to genomic regions with conserved signatures [RNA-seq]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-23512 | Reduced levels of two modifiers of epigenetic gene silencing, Dnmt3a and Trim28, cause increased phenotypic noise
Series Id: GSE23512
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE214161 | Zmym2 is essential for methylation of germline genes and active transposons in embryogenesis [RNA-seq]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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Publication
30393076 | J:272558
First Author: Hirota T
Year: 2018
Journal: Dev Cell
Title: SETDB1 Links the Meiotic DNA Damage Response to Sex Chromosome Silencing in Mice.
Volume: 47
Issue: 5
Pages: 645-659.e6
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Publication
33709141 | J:310159
First Author: Hara S
Year: 2021
Journal: Hum Mol Genet
Title: Humanization of a tandem repeat in IG-DMR causes stochastic restoration of paternal imprinting at mouse Dlk1-Dio3 domain.
Volume: 30
Issue: 7
Pages: 564-574
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Publication
25284223 | J:215524
First Author: Wei N
Year: 2014
Journal: Mol Cell
Title: Oxidative stress diverts tRNA synthetase to nucleus for protection against DNA damage.
Volume: 56
Issue: 2
Pages: 323-32
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Publication
36706191 | J:333157
First Author: Zhang W
Year: 2023
Journal: Sci Adv
Title: Lnc956-TRIM28-HSP90B1 complex on replication forks promotes CMG helicase retention to ensure stem cell genomic stability and embryogenesis.
Volume: 9
Issue: 4
Pages: eadf6277
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Publication
37595039 | J:344340
First Author: Kuang M
Year: 2023
Journal: Sci Adv
Title: XAF1 promotes anti-RNA virus immune responses by regulating chromatin accessibility.
Volume: 9
Issue: 33
Pages: eadg5211
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HT Experiment
GSE84734 | The chromatin associated proteins HP1 behave as liver specific tumour suppressors in mice
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE119882 | Imprinted gene expression at the Dlk1-Dio3 cluster is controlled by both maternal and paternal IG-DMRs in a tissue-specific fashion.
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE233829 | TNRC18 recognizes H3K9me3 to mediate transposable elements silencing at ERV regions [T18-tissue RNA-Seq]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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Publication
30846446 | J:284126
 
First Author: Seah MKY
Year: 2019
Journal: Development
Title: The KRAB-zinc-finger protein ZFP708 mediates epigenetic repression at RMER19B retrotransposons.
Volume: 146
Issue: 19
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Publication
37395395 | J:338939
     
First Author: Graham-Paquin AL
Year: 2023
Journal: Nucleic Acids Res
Title: ZMYM2 is essential for methylation of germline genes and active transposons in embryonic development.
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Publication
34475432 | J:311517
First Author: Cimino I
Year: 2021
Journal: Sci Rep
Title: Murine neuronatin deficiency is associated with a hypervariable food intake and bimodal obesity.
Volume: 11
Issue: 1
Pages: 17571
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Publication
24991018 | J:319492
First Author: Kao TH
Year: 2014
Journal: J Virol
Title: Ectopic DNMT3L triggers assembly of a repressive complex for retroviral silencing in somatic cells.
Volume: 88
Issue: 18
Pages: 10680-95
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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