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Lu H |
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2020 |
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Am J Pathol |
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Spontaneous Development of Hepatocellular Carcinoma and B-Cell Lymphoma in Mosaic and Heterozygous Brca2 and Cdkn1a Interacting Protein Knockout Mice. |
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190 |
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6 |
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•
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Mizuta R |
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Proc Natl Acad Sci U S A |
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RAB22 and RAB163/mouse BRCA2: proteins that specifically interact with the RAD51 protein. |
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| First Author: |
Tuveson DA |
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| Journal: |
Cold Spring Harb Symp Quant Biol |
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| Volume: |
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Percec I |
| Year: |
2003 |
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Genetics |
| Title: |
An N-ethyl-N-nitrosourea mutagenesis screen for epigenetic mutations in the mouse. |
| Volume: |
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Hulit J |
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2006 |
| Journal: |
Cancer Res |
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p27Kip1 repression of ErbB2-induced mammary tumor growth in transgenic mice involves Skp2 and Wnt/beta-catenin signaling. |
| Volume: |
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Zhai Y |
| Year: |
2017 |
| Journal: |
J Pathol |
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High-grade serous carcinomas arise in the mouse oviduct via defects linked to the human disease. |
| Volume: |
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Sakuraba Y |
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Biochem Biophys Res Commun |
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Molecular characterization of ENU mouse mutagenesis and archives. |
| Volume: |
336 |
| Issue: |
2 |
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609-16 |
|
•
•
•
•
•
|
| UniProt Feature |
| Begin: |
1 |
| Description: |
BRCA2 and CDKN1A-interacting protein |
| Type: |
chain |
| End: |
316 |
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•
•
•
•
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Mei L |
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2021 |
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Oncogene |
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SUMOylation activates large tumour suppressor 1 to maintain the tissue homeostasis during Hippo signalling. |
| Volume: |
40 |
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35 |
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5357-5366 |
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Felipe-Medina N |
| Year: |
2020 |
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Elife |
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A missense in HSF2BP causing primary ovarian insufficiency affects meiotic recombination by its novel interactor C19ORF57/BRME1. |
| Volume: |
9 |
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Huse JT |
| Year: |
2009 |
| Journal: |
Brain Pathol |
| Title: |
Genetically engineered mouse models of brain cancer and the promise of preclinical testing. |
| Volume: |
19 |
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1 |
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Oncogene |
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Cai Y |
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BMC Pulm Med |
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Ni L |
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2016 |
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Mol Reprod Dev |
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Multiple roles of FOXJ3 in spermatogenesis: A lesson from Foxj3 conditional knockout mouse models. |
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Keil JM |
| Year: |
2020 |
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Nat Commun |
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Symmetric neural progenitor divisions require chromatin-mediated homologous recombination DNA repair by Ino80. |
| Volume: |
11 |
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Dumitrache LC |
| Year: |
2018 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Apurinic endonuclease-1 preserves neural genome integrity to maintain homeostasis and thermoregulation and prevent brain tumors. |
| Volume: |
115 |
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52 |
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E12285-E12294 |
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•
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| First Author: |
Tang T |
| Year: |
2019 |
| Journal: |
Neuron |
| Title: |
HDAC1 and HDAC2 Regulate Intermediate Progenitor Positioning to Safeguard Neocortical Development. |
| Volume: |
101 |
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6 |
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1117-1133.e5 |
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| First Author: |
Li L |
| Year: |
2023 |
| Journal: |
Cell Rep |
| Title: |
Mettl14-mediated m(6)A modification ensures the cell-cycle progression of late-born retinal progenitor cells. |
| Volume: |
42 |
| Issue: |
6 |
| Pages: |
112596 |
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•
•
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| First Author: |
MGD Nomenclature Committee |
| Year: |
1995 |
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| Title: |
Nomenclature Committee Use |
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•
•
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| Publication |
| First Author: |
Stryke D |
| Year: |
2003 |
| Journal: |
Nucleic Acids Res |
| Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
| Volume: |
31 |
| Issue: |
1 |
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278-81 |
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| First Author: |
International Mouse Strain Resource |
| Year: |
2014 |
| Journal: |
Database Download |
| Title: |
MGI download of germline transmission data for alleles from IMSR strain data |
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•
•
•
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| First Author: |
Mouse Genome Informatics Group |
| Year: |
2003 |
| Journal: |
Database Procedure |
| Title: |
Automatic Encodes (AutoE) Reference |
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•
•
•
•
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| First Author: |
Akagawa R |
| Year: |
2021 |
| Journal: |
Front Cell Dev Biol |
| Title: |
Alternative Functions of Cell Cycle-Related and DNA Repair Proteins in Post-mitotic Neurons. |
| Volume: |
9 |
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| Pages: |
753175 |
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•
•
•
•
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| First Author: |
Helmholtz Zentrum Muenchen GmbH |
| Year: |
2010 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
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•
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•
•
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| First Author: |
Carninci P |
| Year: |
2005 |
| Journal: |
Science |
| Title: |
The transcriptional landscape of the mammalian genome. |
| Volume: |
309 |
| Issue: |
5740 |
| Pages: |
1559-63 |
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•
•
•
•
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| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
Entrez Gene Load |
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•
•
•
•
•
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| First Author: |
Hansen GM |
| Year: |
2008 |
| Journal: |
Genome Res |
| Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
| Volume: |
18 |
| Issue: |
10 |
| Pages: |
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•
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| First Author: |
GemPharmatech |
| Year: |
2020 |
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| Title: |
GemPharmatech Website. |
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•
•
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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•
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| First Author: |
Koss M |
| Year: |
2012 |
| Journal: |
Dev Cell |
| Title: |
Congenital asplenia in mice and humans with mutations in a Pbx/Nkx2-5/p15 module. |
| Volume: |
22 |
| Issue: |
5 |
| Pages: |
913-26 |
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2003 |
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| Title: |
MGI Sequence Curation Reference |
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•
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| First Author: |
Zambrowicz BP |
| Year: |
2003 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
| Volume: |
100 |
| Issue: |
24 |
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14109-14 |
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| First Author: |
GOA curators |
| Year: |
2016 |
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| Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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| First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
| Year: |
2011 |
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| Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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•
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| First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
| Year: |
2008 |
| Journal: |
Database Download |
| Title: |
Mouse Gene Trap Data Load from dbGSS |
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| First Author: |
The Gene Ontology Consortium |
| Year: |
2010 |
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| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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| First Author: |
Diez-Roux G |
| Year: |
2011 |
| Journal: |
PLoS Biol |
| Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
e1000582 |
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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| First Author: |
The RIKEN BioResource Center |
| Year: |
2006 |
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Unpublished |
| Title: |
Information obtained from The RIKEN BioResource Center |
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Tang F |
| Year: |
2011 |
| Journal: |
PLoS One |
| Title: |
Deterministic and stochastic allele specific gene expression in single mouse blastomeres. |
| Volume: |
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Freeman TC |
| Year: |
1998 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Expression Mapping of Mouse Genes |
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•
•
•
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
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| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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| First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
| Year: |
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| Title: |
Annotation inferences using phylogenetic trees |
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| First Author: |
Allen Institute for Brain Science |
| Year: |
2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
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Mouse Genome Informatics |
| Year: |
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Protein Ontology Association Load. |
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
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| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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Birgit Meldal and Sandra Orchard (1). (1) European Bioinformatics Institute (EBI), Hinxton, Cambridgeshire, United Kingdom |
| Year: |
2023 |
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Manual transfer of experimentally-verified manual GO annotation data to homologous complexes by curator judgment of sequence, composition and function similarity |
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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| First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
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| First Author: |
Bairoch A |
| Year: |
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| Journal: |
Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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| First Author: |
The Gene Ontology Consortium |
| Year: |
2016 |
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| Title: |
Automatic assignment of GO terms using logical inference, based on on inter-ontology links |
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•
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| First Author: |
Visel A |
| Year: |
2004 |
| Journal: |
Nucleic Acids Res |
| Title: |
GenePaint.org: an atlas of gene expression patterns in the mouse embryo. |
| Volume: |
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| Issue: |
Database issue |
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•
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| First Author: |
Bedogni F |
| Year: |
2021 |
| Journal: |
Front Mol Neurosci |
| Title: |
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
| Volume: |
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•
•
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| First Author: |
Lennon G |
| Year: |
1999 |
| Journal: |
Database Download |
| Title: |
WashU-HHMI Mouse EST Project |
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•
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| First Author: |
The Gene Ontology Consortium |
| Year: |
2014 |
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| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
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| First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
| Year: |
2004 |
| Journal: |
Database Release |
| Title: |
Mouse T31 Radiation Hybrid Data Load |
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|
•
•
•
•
•
|
| Gene |
|
•
•
•
•
•
|
| Gene |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
dog, domestic |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
dog, domestic |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chimpanzee |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chimpanzee |
|
•
•
•
•
•
|
| Gene |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chimpanzee |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
dog, domestic |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
cattle |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
cattle |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
cattle |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chicken |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chicken |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
chicken |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
zebrafish |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
zebrafish |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
zebrafish |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
zebrafish |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
frog, western clawed |
|
•
•
•
•
•
|
| Gene |
| Type: |
gene |
| Organism: |
frog, western clawed |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Homologous_superfamily |
| Description: |
This entry represents a domain found in BRCA2 proteins. This domain adopts a helical structure, consisting of a four-helix cluster core (alpha 1, alpha 8, alpha 9, alpha 10) and two successive β-hairpins (beta 1 to beta 4). An approximately 50-amino acid segment that contains four short helices (alpha 2 to alpha 4), meanders around the surface of the core structure. In BRCA2, thealpha 9 and alpha 10 helices pack with BRCA-2_OB1 () through van der Waals contacts involving hydrophobic and aromatic residues, and also through side-chain and backbone hydrogen bonds. This domain binds the 70-amino acid DSS1 (deleted in split-hand/split foot syndrome) protein, which was originally identified as one of three genes that map to a 1.5-Mb locus deleted in an inherited developmental malformation syndrome []. |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| UniProt Feature |
| Begin: |
1 |
| Description: |
Partner and localizer of BRCA2 |
| Type: |
chain |
| End: |
1104 |
|
•
•
•
•
•
|
| Allele |
| Name: |
breast cancer 2, early onset; targeted mutation 2, Tak W Mak |
| Allele Type: |
Targeted |
| Attribute String: |
Conditional ready, No functional change |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Sy SM |
| Year: |
2009 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
PALB2 is an integral component of the BRCA complex required for homologous recombination repair. |
| Volume: |
106 |
| Issue: |
17 |
| Pages: |
7155-60 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ducy M |
| Year: |
2019 |
| Journal: |
Trends Biochem Sci |
| Title: |
The Tumor Suppressor PALB2: Inside Out. |
| Volume: |
44 |
| Issue: |
3 |
| Pages: |
226-240 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
PALB2 (partner and Localizer of BRCA2) binds to the N-terminal region of BRCA2, and is vital for its function by facilitating its subnuclear localization []. It binds BRCA1 and BRCA2 and serves as the molecular scaffold in the formation of the BRCA1-PALB2-BRCA2 complex, which is required for homologous recombination repair []. It has also been shown to bind DNA and physically interacts with RAD51 []. Biallelic mutations in PALB2 cause Fanconi anemia (FA) subtype FA-N, whereas monoallelic mutations predispose to breast, and pancreatic familial cancers[]. |
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| Publication |
| First Author: |
Ingvarsson S |
| Year: |
1999 |
| Journal: |
Anticancer Res |
| Title: |
The Brca1 and Brca2 proteins and tumor pathogenesis. |
| Volume: |
19 |
| Issue: |
4B |
| Pages: |
2853-61 |
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
338
 |
| Fragment?: |
false |
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| Allele |
| Name: |
breast cancer 2, early onset; targeted mutation 1, L Michelle Bennett |
| Allele Type: |
Targeted |
| Attribute String: |
Null/knockout |
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| Publication |
| First Author: |
Zimmer J |
| Year: |
2016 |
| Journal: |
Mol Cell |
| Title: |
Targeting BRCA1 and BRCA2 Deficiencies with G-Quadruplex-Interacting Compounds. |
| Volume: |
61 |
| Issue: |
3 |
| Pages: |
449-460 |
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| Gene |
| Type: |
gene |
| Organism: |
frog, African clawed |
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| Gene |
| Type: |
gene |
| Organism: |
frog, African clawed |
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| Gene |
| Type: |
gene |
| Organism: |
frog, African clawed |
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| Gene |
| Type: |
gene |
| Organism: |
frog, African clawed |
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
384
 |
| Fragment?: |
false |
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
741
 |
| Fragment?: |
false |
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