| Type |
Details |
Score |
| Publication |
| First Author: |
Ayyangar U |
| Year: |
2024 |
| Journal: |
EMBO J |
| Title: |
Metabolic rewiring of macrophages by epidermal-derived lactate promotes sterile inflammation in the murine skin. |
| Volume: |
43 |
| Issue: |
7 |
| Pages: |
1113-1134 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Craig JC |
| Year: |
1997 |
| Journal: |
Biochem Mol Med |
| Title: |
Developmental expression of morphoregulatory genes in the mouse embryo: an analytical approach using a novel technology. |
| Volume: |
60 |
| Issue: |
2 |
| Pages: |
81-91 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kalsotra A |
| Year: |
2008 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
A postnatal switch of CELF and MBNL proteins reprograms alternative splicing in the developing heart. |
| Volume: |
105 |
| Issue: |
51 |
| Pages: |
20333-8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lee S |
| Year: |
2020 |
| Journal: |
Development |
| Title: |
Cleft lip and cleft palate in Esrp1 knockout mice is associated with alterations in epithelial-mesenchymal crosstalk. |
| Volume: |
147 |
| Issue: |
21 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bardot P |
| Year: |
2017 |
| Journal: |
Development |
| Title: |
The TAF10-containing TFIID and SAGA transcriptional complexes are dispensable for early somitogenesis in the mouse embryo. |
| Volume: |
144 |
| Issue: |
20 |
| Pages: |
3808-3818 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Cankaya M |
| Year: |
2007 |
| Journal: |
BMC Genomics |
| Title: |
An analysis of expression patterns of genes encoding proteins with catalytic activities. |
| Volume: |
8 |
|
| Pages: |
232 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Thut CJ |
| Year: |
2001 |
| Journal: |
Dev Biol |
| Title: |
A large-scale in situ screen provides molecular evidence for the induction of eye anterior segment structures by the developing lens. |
| Volume: |
231 |
| Issue: |
1 |
| Pages: |
63-76 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bouwman J |
| Year: |
2006 |
| Journal: |
J Neurochem |
| Title: |
Reduced expression of neuropeptide genes in a genome-wide screen of a secretion-deficient mouse. |
| Volume: |
99 |
| Issue: |
1 |
| Pages: |
84-96 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bulusu V |
| Year: |
2017 |
| Journal: |
Dev Cell |
| Title: |
Spatiotemporal Analysis of a Glycolytic Activity Gradient Linked to Mouse Embryo Mesoderm Development. |
| Volume: |
40 |
| Issue: |
4 |
| Pages: |
331-341.e4 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
UniProt curators |
| Year: |
2014 |
|
| Title: |
Electronic Gene Ontology annotations created by transferring manual GO annotations between related proteins based on shared sequence features |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Werner HB |
| Year: |
2007 |
| Journal: |
J Neurosci |
| Title: |
Proteolipid protein is required for transport of sirtuin 2 into CNS myelin. |
| Volume: |
27 |
| Issue: |
29 |
| Pages: |
7717-30 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ko MS |
| Year: |
1998 |
| Journal: |
Hum Mol Genet |
| Title: |
Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. |
| Volume: |
7 |
| Issue: |
12 |
| Pages: |
1967-78 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Shanghai Model Organisms Center |
| Year: |
2017 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bailey PJ |
| Year: |
2006 |
| Journal: |
Exp Cell Res |
| Title: |
A global genomic transcriptional code associated with CNS-expressed genes. |
| Volume: |
312 |
| Issue: |
16 |
| Pages: |
3108-19 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mootha VK |
| Year: |
2003 |
| Journal: |
Cell |
| Title: |
Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. |
| Volume: |
115 |
| Issue: |
5 |
| Pages: |
629-40 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tang F |
| Year: |
2011 |
| Journal: |
PLoS One |
| Title: |
Deterministic and stochastic allele specific gene expression in single mouse blastomeres. |
| Volume: |
6 |
| Issue: |
6 |
| Pages: |
e21208 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
|
| Title: |
Gene Ontology annotation based on UniPathway vocabulary mapping |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
GO Central curators, GOA curators, Rhea curators |
| Year: |
2020 |
|
| Title: |
Automatic Gene Ontology annotation based on Rhea mapping |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
GOA curators, MGI curators |
| Year: |
2001 |
|
| Title: |
Gene Ontology annotation based on Enzyme Commission mapping |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2014 |
|
| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hansen J |
| Year: |
2003 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. |
| Volume: |
100 |
| Issue: |
17 |
| Pages: |
9918-22 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
MGI and IMPC |
| Year: |
2018 |
| Journal: |
Database Release |
| Title: |
MGI Load of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Visel A |
| Year: |
2004 |
| Journal: |
Nucleic Acids Res |
| Title: |
GenePaint.org: an atlas of gene expression patterns in the mouse embryo. |
| Volume: |
32 |
| Issue: |
Database issue |
| Pages: |
D552-6 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Stryke D |
| Year: |
2003 |
| Journal: |
Nucleic Acids Res |
| Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
| Volume: |
31 |
| Issue: |
1 |
| Pages: |
278-81 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
| Year: |
2010 |
|
| Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bairoch A |
| Year: |
1999 |
| Journal: |
Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
| Year: |
2014 |
| Journal: |
Database Release |
| Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hansen GM |
| Year: |
2008 |
| Journal: |
Genome Res |
| Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
| Volume: |
18 |
| Issue: |
10 |
| Pages: |
1670-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Helmholtz Zentrum Muenchen GmbH |
| Year: |
2010 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
|
| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
DDB, FB, MGI, GOA, ZFIN curators |
| Year: |
2001 |
|
| Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Magdaleno S |
| Year: |
2006 |
| Journal: |
PLoS Biol |
| Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
| Volume: |
4 |
| Issue: |
4 |
| Pages: |
e86 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2003 |
|
| Title: |
MGI Sequence Curation Reference |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Carninci P |
| Year: |
2005 |
| Journal: |
Science |
| Title: |
The transcriptional landscape of the mammalian genome. |
| Volume: |
309 |
| Issue: |
5740 |
| Pages: |
1559-63 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kawai J |
| Year: |
2001 |
| Journal: |
Nature |
| Title: |
Functional annotation of a full-length mouse cDNA collection. |
| Volume: |
409 |
| Issue: |
6821 |
| Pages: |
685-90 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Adams DJ |
| Year: |
2024 |
| Journal: |
Nature |
| Title: |
Genetic determinants of micronucleus formation in vivo. |
| Volume: |
627 |
| Issue: |
8002 |
| Pages: |
130-136 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
GemPharmatech |
| Year: |
2020 |
|
| Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
| Year: |
2008 |
| Journal: |
Database Download |
| Title: |
Mouse Gene Trap Data Load from dbGSS |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Cyagen Biosciences Inc. |
| Year: |
2022 |
|
| Title: |
Cyagen Biosciences Website. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
| Year: |
2011 |
|
| Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
|
| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Okazaki Y |
| Year: |
2002 |
| Journal: |
Nature |
| Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
| Volume: |
420 |
| Issue: |
6915 |
| Pages: |
563-73 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Diez-Roux G |
| Year: |
2011 |
| Journal: |
PLoS Biol |
| Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
e1000582 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Allen Institute for Brain Science |
| Year: |
2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Group |
| Year: |
2003 |
| Journal: |
Database Procedure |
| Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jing X |
| Year: |
2023 |
| Journal: |
Mol Biol Cell |
| Title: |
Acetate regulates GAPDH acetylation and T helper 1 cell differentiation. |
| Volume: |
34 |
| Issue: |
7 |
| Pages: |
br10 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Galván-Peña S |
| Year: |
2019 |
| Journal: |
Nat Commun |
| Title: |
Malonylation of GAPDH is an inflammatory signal in macrophages. |
| Volume: |
10 |
| Issue: |
1 |
| Pages: |
338 |
|
•
•
•
•
•
|
| Allele |
| Name: |
glyceraldehyde-3-phosphate dehydrogenase; mutation 2, Neuherberg |
| Allele Type: |
Radiation induced |
|
|
•
•
•
•
•
|
| Allele |
| Name: |
glyceraldehyde-3-phosphate dehydrogenase; mutation 4, Neuherberg |
| Allele Type: |
Radiation induced |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bruns GA |
| Year: |
1978 |
| Journal: |
Cytogenet Cell Genet |
| Title: |
Expression of GAPDH and TPI in dog-rodent hybrids. |
| Volume: |
22 |
| Issue: |
1-6 |
| Pages: |
547-51 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Liao ST |
| Year: |
2019 |
| Journal: |
Nat Commun |
| Title: |
4-Octyl itaconate inhibits aerobic glycolysis by targeting GAPDH to exert anti-inflammatory effects. |
| Volume: |
10 |
| Issue: |
1 |
| Pages: |
5091 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mondragón L |
| Year: |
2019 |
| Journal: |
Cancer Cell |
| Title: |
GAPDH Overexpression in the T Cell Lineage Promotes Angioimmunoblastic T Cell Lymphoma through an NF-κB-Dependent Mechanism. |
| Volume: |
36 |
| Issue: |
3 |
| Pages: |
268-287.e10 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Chiche J |
| Year: |
2015 |
| Journal: |
Leukemia |
| Title: |
GAPDH enhances the aggressiveness and the vascularization of non-Hodgkin's B lymphomas via NF-κB-dependent induction of HIF-1α. |
| Volume: |
29 |
| Issue: |
5 |
| Pages: |
1163-76 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yoo HJ |
| Year: |
2022 |
| Journal: |
Cell Rep |
| Title: |
MsrB1-regulated GAPDH oxidation plays programmatic roles in shaping metabolic and inflammatory signatures during macrophage activation. |
| Volume: |
41 |
| Issue: |
6 |
| Pages: |
111598 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lin XT |
| Year: |
2023 |
| Journal: |
Cell Rep |
| Title: |
Elevated FBXW10 drives hepatocellular carcinoma tumorigenesis via AR-VRK2 phosphorylation-dependent GAPDH ubiquitination in male transgenic mice. |
| Volume: |
42 |
| Issue: |
7 |
| Pages: |
112812 |
|
•
•
•
•
•
|
| Allele |
| Name: |
glyceraldehyde-3-phosphate dehydrogenase; mutation 1, Neuherberg |
| Allele Type: |
Chemically induced (ENU) |
|
|
•
•
•
•
•
|
| Allele |
| Name: |
glyceraldehyde-3-phosphate dehydrogenase; mutation 3, Neuherberg |
| Allele Type: |
Chemically induced (ENU) |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Chiche J |
| Year: |
2019 |
| Journal: |
Cell Metab |
| Title: |
GAPDH Expression Predicts the Response to R-CHOP, the Tumor Metabolic Status, and the Response of DLBCL Patients to Metabolic Inhibitors. |
| Volume: |
29 |
| Issue: |
6 |
| Pages: |
1243-1257.e10 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Cha SJ |
| Year: |
2016 |
| Journal: |
J Exp Med |
| Title: |
Identification of GAPDH on the surface of Plasmodium sporozoites as a new candidate for targeting malaria liver invasion. |
| Volume: |
213 |
| Issue: |
10 |
| Pages: |
2099-112 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yang S |
| Year: |
2024 |
| Journal: |
Brain Behav Immun |
| Title: |
Multi-omics analysis reveals GAPDH posttranscriptional regulation of IFN-γ and PHGDH as a metabolic checkpoint of microglia polarization. |
| Volume: |
117 |
|
| Pages: |
155-166 |
|
•
•
•
•
•
|
| UniProt Feature |
| Begin: |
2 |
| Description: |
Necessary for association with microtubule and interaction with GAPDH |
| Type: |
short sequence motif |
| End: |
6 |
|
•
•
•
•
•
|
| Allele |
| Name: |
glyceraldehyde-3-phosphate dehydrogenase; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Reporter |
|
•
•
•
•
•
|
| Interaction Experiment |
| Description: |
Neuroprotection by pharmacologic blockade of the GAPDH death cascade. |
|
•
•
•
•
•
|
| Interaction Experiment |
| Description: |
Extracellular GAPDH binds to L1 and enhances neurite outgrowth. |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
333
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
|
•
•
•
•
•
|
| Interaction Experiment |
| Description: |
Hydrogen sulfide-induced GAPDH sulfhydration disrupts the CCAR2-SIRT1 interaction to initiate autophagy. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hara MR |
| Year: |
2006 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Neuroprotection by pharmacologic blockade of the GAPDH death cascade. |
| Volume: |
103 |
| Issue: |
10 |
| Pages: |
3887-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Makhina T |
| Year: |
2009 |
| Journal: |
Mol Cell Neurosci |
| Title: |
Extracellular GAPDH binds to L1 and enhances neurite outgrowth. |
| Volume: |
41 |
| Issue: |
2 |
| Pages: |
206-18 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Iqbal IK |
| Year: |
2021 |
| Journal: |
Autophagy |
| Title: |
Hydrogen sulfide-induced GAPDH sulfhydration disrupts the CCAR2-SIRT1 interaction to initiate autophagy. |
|
|
| Pages: |
1-19 |
|
•
•
•
•
•
|
| GO Term |
|
•
•
•
•
•
|
| MP Term |
|
•
•
•
•
•
|
| MP Term |
|
•
•
•
•
•
|
| MP Term |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) plays an important role in glycolysis and gluconeogenesis []by reversibly catalysing the oxidation and phosphorylation of D-glyceraldehyde-3-phosphate to 1,3-diphospho-glycerate. The enzyme exists as a tetramer of identical subunits, each containing 2 conserved functional domains: an NAD-binding domain, and a highly conserved catalytic domain []. The enzyme has been found to bind to actin and tropomyosin, and may thus have a role in cytoskeleton assembly. Alternatively, the cytoskeleton may provide a framework for precise positioning of the glycolytic enzymes, thus permitting efficient passage of metabolites from enzyme to enzyme [].GAPDH displays diverse non-glycolytic functions as well, its role depending upon its subcellular location. For instance, the translocation of GAPDH to the nucleus acts as a signalling mechanism for programmed cell death, or apoptosis []. The accumulation of GAPDH within the nucleus is involved in the induction of apoptosis, where GAPDH functions in the activation of transcription. The presence of GAPDH is associated with the synthesis of pro-apoptotic proteins like BAX, c-JUN and GAPDH itself.GAPDH has been implicated in certain neurological diseases: GAPDH is able to bind to the gene products from neurodegenerative disorders such as Huntington's disease, Alzheimer's disease, Parkinson's disease and Machado-Joseph disease through stretches encoded by their CAG repeats. Abnormal neuronal apoptosis is associated with these diseases. Propargylamines such as deprenyl increase neuronal survival by interfering with apoptosis signalling pathways via their binding to GAPDH, which decreases the synthesis of pro-apoptotic proteins [].This entry represents the N-terminal domain which is a Rossmann NAD(P) binding fold. |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) plays an important role in glycolysis and gluconeogenesis []by reversibly catalysing the oxidation and phosphorylation of D-glyceraldehyde-3-phosphate to 1,3-diphospho-glycerate. The enzyme exists as a tetramer of identical subunits, each containing 2 conserved functional domains: an NAD-binding domain, and a highly conserved catalytic domain []. The enzyme has been found to bind to actin and tropomyosin, and may thus have a role in cytoskeleton assembly. Alternatively, the cytoskeleton may provide a framework for precise positioning of the glycolytic enzymes, thus permitting efficient passage of metabolites from enzyme to enzyme [].GAPDH displays diverse non-glycolytic functions as well, its role depending upon its subcellular location. For instance, the translocation of GAPDH to the nucleus acts as a signalling mechanism for programmed cell death, or apoptosis []. The accumulation of GAPDH within the nucleus is involved in the induction of apoptosis, where GAPDH functions in the activation of transcription. The presence of GAPDH is associated with the synthesis of pro-apoptotic proteins like BAX, c-JUN and GAPDH itself.GAPDH has been implicated in certain neurological diseases: GAPDH is able to bind to the gene products from neurodegenerative disorders such as Huntington's disease, Alzheimer's disease, Parkinson's disease and Machado-Joseph disease through stretches encoded by their CAG repeats. Abnormal neuronal apoptosis is associated with these diseases. Propargylamines such as deprenyl increase neuronal survival by interfering with apoptosis signalling pathways via their binding to GAPDH, which decreases the synthesis of pro-apoptotic proteins [].This entry represents the C-terminal domain which is a mixed alpha/antiparallel beta fold. |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
67
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Fabry S |
| Year: |
1989 |
| Journal: |
Eur J Biochem |
| Title: |
Nucleotide sequence of the glyceraldehyde-3-phosphate dehydrogenase gene from the mesophilic methanogenic archaebacteria Methanobacterium bryantii and Methanobacterium formicicum. Comparison with the respective gene structure of the closely related extreme thermophile Methanothermus fervidus. |
| Volume: |
179 |
| Issue: |
2 |
| Pages: |
405-13 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) plays an important role in glycolysis and gluconeogenesis []by reversibly catalysing the oxidation and phosphorylation of D-glyceraldehyde-3-phosphate to 1,3-diphospho-glycerate. The enzyme exists as a tetramer of identical subunits, each containing 2 conserved functional domains: an NAD-binding domain, and a highly conserved catalytic domain []. The enzyme has been found to bind to actin and tropomyosin, and may thus have a role in cytoskeleton assembly. Alternatively, the cytoskeleton may provide a framework for precise positioning of the glycolytic enzymes, thus permitting efficient passage of metabolites from enzyme to enzyme [].GAPDH displays diverse non-glycolytic functions as well, its role depending upon its subcellular location. For instance, the translocation of GAPDH to the nucleus acts as a signalling mechanism for programmed cell death, or apoptosis []. The accumulation of GAPDH within the nucleus is involved in the induction of apoptosis, where GAPDH functions in the activation of transcription. The presence of GAPDH is associated with the synthesis of pro-apoptotic proteins like BAX, c-JUN and GAPDH itself.GAPDH has been implicated in certain neurological diseases: GAPDH is able to bind to the gene products from neurodegenerative disorders such as Huntington's disease, Alzheimer's disease, Parkinson's disease and Machado-Joseph disease through stretches encoded by their CAG repeats. Abnormal neuronal apoptosis is associated with these diseases. Propargylamines such as deprenyl increase neuronal survival by interfering with apoptosis signalling pathways via their binding to GAPDH, which decreases the synthesis of pro-apoptotic proteins [].This entry contains a small clade of dehydrogenases in gamma-proteobacteria which utilise NAD+ to oxidize erythrose-4-phosphate (E4P) to 4-phospho-erythronate, a precursor for the de novo synthesis of pyridoxine via 4-hydroxythreonine and D-1-deoxyxylulose []. This enzyme activity appears to have evolved from glyceraldehyde-3-phosphate dehydrogenase, whose substrate differs only in the lack of one carbon relative to E4P. It is possible that some of the GAPDH enzymes may prove to be bifunctional in certain species. |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Active_site |
| Description: |
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) plays an important role in glycolysis and gluconeogenesis []by reversibly catalysing the oxidation and phosphorylation of D-glyceraldehyde-3-phosphate to 1,3-diphospho-glycerate. The enzyme exists as a tetramer of identical subunits, each containing 2 conserved functional domains: an NAD-binding domain, and a highly conserved catalytic domain []. The enzyme has been found to bind to actin and tropomyosin, and may thus have a role in cytoskeleton assembly. Alternatively, the cytoskeleton may provide a framework for precise positioning of the glycolytic enzymes, thus permitting efficient passage of metabolites from enzyme to enzyme [].GAPDH displays diverse non-glycolytic functions as well, its role depending upon its subcellular location. For instance, the translocation of GAPDH to the nucleus acts as a signalling mechanism for programmed cell death, or apoptosis []. The accumulation of GAPDH within the nucleus is involved in the induction of apoptosis, where GAPDH functions in the activation of transcription. The presence of GAPDH is associated with the synthesis of pro-apoptotic proteins like BAX, c-JUN and GAPDH itself.GAPDH has been implicated in certain neurological diseases: GAPDH is able to bind to the gene products from neurodegenerative disorders such as Huntington's disease, Alzheimer's disease, Parkinson's disease and Machado-Joseph disease through stretches encoded by their CAG repeats. Abnormal neuronal apoptosis is associated with these diseases. Propargylamines such as deprenyl increase neuronal survival by interfering with apoptosis signalling pathways via their binding to GAPDH, which decreases the synthesis of pro-apoptotic proteins [].A cysteine in the middle of the molecule is involved in forming a covalent phosphoglycerol thioester intermediate. The sequence around this cysteine is totally conserved in eubacterial and eukaryotic GAPDHs and is also present, albeit in a variant form, in the otherwise highly divergent archaebacterial GAPDH []. The pattern in this entry represents the active site. |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
156
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
77
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
96
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
209
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
236
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Dugaiczyk A |
| Year: |
1983 |
| Journal: |
Biochemistry |
| Title: |
Cloning and sequencing of a deoxyribonucleic acid copy of glyceraldehyde-3-phosphate dehydrogenase messenger ribonucleic acid isolated from chicken muscle. |
| Volume: |
22 |
| Issue: |
7 |
| Pages: |
1605-13 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Huang XY |
| Year: |
1989 |
| Journal: |
J Mol Biol |
| Title: |
Genomic organization of the glyceraldehyde-3-phosphate dehydrogenase gene family of Caenorhabditis elegans. |
| Volume: |
206 |
| Issue: |
3 |
| Pages: |
411-24 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tatton W |
| Year: |
2003 |
| Journal: |
J Neural Transm (Vienna) |
| Title: |
Neuroprotection by deprenyl and other propargylamines: glyceraldehyde-3-phosphate dehydrogenase rather than monoamine oxidase B. |
| Volume: |
110 |
| Issue: |
5 |
| Pages: |
509-15 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Berry MD |
| Year: |
2000 |
| Journal: |
J Neurosci Res |
| Title: |
Glyceraldehyde-3-phosphate dehydrogenase and apoptosis. |
| Volume: |
60 |
| Issue: |
2 |
| Pages: |
150-4 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Galland F |
| Year: |
1990 |
| Journal: |
Biochimie |
| Title: |
Characterization of a murine glyceraldehyde-3-phosphate dehydrogenase pseudogene. |
| Volume: |
72 |
| Issue: |
10 |
| Pages: |
759-62 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhao G |
| Year: |
1995 |
| Journal: |
J Bacteriol |
| Title: |
Biochemical characterization of gapB-encoded erythrose 4-phosphate dehydrogenase of Escherichia coli K-12 and its possible role in pyridoxal 5'-phosphate biosynthesis. |
| Volume: |
177 |
| Issue: |
10 |
| Pages: |
2804-12 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
440
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
280
 |
| Fragment?: |
true |
|
•
•
•
•
•
|