Type |
Details |
Score |
Publication |
First Author: |
Shimizu H |
Year: |
2013 |
Journal: |
PLoS One |
Title: |
The AERO system: a 3D-like approach for recording gene expression patterns in the whole mouse embryo. |
Volume: |
8 |
Issue: |
10 |
Pages: |
e75754 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shanghai Model Organisms Center |
Year: |
2017 |
Journal: |
MGI Direct Data Submission |
Title: |
Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
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|
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•
•
•
•
•
|
Publication |
First Author: |
Hoffman BG |
Year: |
2008 |
Journal: |
Genome Biol |
Title: |
Identification of transcripts with enriched expression in the developing and adult pancreas. |
Volume: |
9 |
Issue: |
6 |
Pages: |
R99 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wiese CB |
Year: |
2012 |
Journal: |
Front Neurosci |
Title: |
A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract. |
Volume: |
6 |
|
Pages: |
130 |
|
•
•
•
•
•
|
Publication |
First Author: |
Guo G |
Year: |
2010 |
Journal: |
Dev Cell |
Title: |
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. |
Volume: |
18 |
Issue: |
4 |
Pages: |
675-85 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yokoyama S |
Year: |
2009 |
Journal: |
Dev Cell |
Title: |
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. |
Volume: |
17 |
Issue: |
6 |
Pages: |
836-48 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Mouse Synonym Curation |
|
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Friedel RH |
Year: |
2007 |
Journal: |
Brief Funct Genomic Proteomic |
Title: |
EUCOMM--the European conditional mouse mutagenesis program. |
Volume: |
6 |
Issue: |
3 |
Pages: |
180-5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gray PA |
Year: |
2004 |
Journal: |
Science |
Title: |
Mouse brain organization revealed through direct genome-scale TF expression analysis. |
Volume: |
306 |
Issue: |
5705 |
Pages: |
2255-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lennon G |
Year: |
1999 |
Journal: |
Database Download |
Title: |
WashU-HHMI Mouse EST Project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Velocigene |
Year: |
2008 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals) |
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|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GUDMAP Consortium |
Year: |
2004 |
Journal: |
www.gudmap.org |
Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Helmholtz Zentrum Muenchen GmbH |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
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|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Magdaleno S |
Year: |
2006 |
Journal: |
PLoS Biol |
Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
Volume: |
4 |
Issue: |
4 |
Pages: |
e86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
MGI Sequence Curation Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kawai J |
Year: |
2001 |
Journal: |
Nature |
Title: |
Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
Issue: |
6821 |
Pages: |
685-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
Pages: |
14109-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
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|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Ye A |
Year: |
2016 |
Journal: |
Epigenetics |
Title: |
PEG3 binds to H19-ICR as a transcriptional repressor. |
Volume: |
11 |
Issue: |
12 |
Pages: |
889-900 |
|
•
•
•
•
•
|
Antisense lncRNA Gene |
Type: |
antisense_lncRNA_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Publication |
First Author: |
Kim JD |
Year: |
2009 |
Journal: |
Nucleic Acids Res |
Title: |
YY1's role in DNA methylation of Peg3 and Xist. |
Volume: |
37 |
Issue: |
17 |
Pages: |
5656-64 |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
Cyclophilin a protects Peg3 from hypermethylation and inactive histone modification. |
|
•
•
•
•
•
|
Publication |
First Author: |
Denomme MM |
Year: |
2012 |
Journal: |
Front Genet |
Title: |
Compromised fertility disrupts Peg1 but not Snrpn and Peg3 imprinted methylation acquisition in mouse oocytes. |
Volume: |
3 |
|
Pages: |
129 |
|
•
•
•
•
•
|
Allele |
Name: |
paternally expressed 3; endonuclease-mediated mutation 2, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
Publication |
First Author: |
Hiby SE |
Year: |
2001 |
Journal: |
Hum Mol Genet |
Title: |
Paternal monoallelic expression of PEG3 in the human placenta. |
Volume: |
10 |
Issue: |
10 |
Pages: |
1093-100 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lu YC |
Year: |
2006 |
Journal: |
J Biol Chem |
Title: |
Cyclophilin a protects Peg3 from hypermethylation and inactive histone modification. |
Volume: |
281 |
Issue: |
51 |
Pages: |
39081-7 |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
Publication |
First Author: |
Jiang CD |
Year: |
2011 |
Journal: |
Genetika |
Title: |
Assessment of genomic imprinting of PPP1R9A, NAP1L5 and PEG3 in pigs. |
Volume: |
47 |
Issue: |
4 |
Pages: |
537-42 |
|
•
•
•
•
•
|
Allele |
Name: |
paternally expressed 3; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Conditional ready, No functional change |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion KA50, GENSAT Project at Rockefeller University |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
Strain |
Attribute String: |
mutant stock, transgenic |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 26, David Sassoon |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Allele |
Name: |
deletion, Chr 7, Joomyeong Kim 1 |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
Strain |
Attribute String: |
transgenic, mutant strain, coisogenic |
|
•
•
•
•
•
|
Publication |
First Author: |
Sayed A |
Year: |
2022 |
Journal: |
Sci Rep |
Title: |
Hypoxia promotes a perinatal-like progenitor state in the adult murine epicardium. |
Volume: |
12 |
Issue: |
1 |
Pages: |
9250 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pannérec A |
Year: |
2013 |
Journal: |
Development |
Title: |
Defining skeletal muscle resident progenitors and their cell fate potentials. |
Volume: |
140 |
Issue: |
14 |
Pages: |
2879-91 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dierick F |
Year: |
2016 |
Journal: |
Circ Res |
Title: |
Resident PW1+ Progenitor Cells Participate in Vascular Remodeling During Pulmonary Arterial Hypertension. |
Volume: |
118 |
Issue: |
5 |
Pages: |
822-33 |
|
•
•
•
•
•
|
Allele |
Name: |
inversion, Chr 7, Joomyeong Kim 1; inversion Chr 7, Joomyeong Kim 1 |
Allele Type: |
Targeted |
|
|
•
•
•
•
•
|
Publication |
First Author: |
MartÃn Y |
Year: |
2015 |
Journal: |
Oncogene |
Title: |
USP29 controls the stability of checkpoint adaptor Claspin by deubiquitination. |
Volume: |
34 |
Issue: |
8 |
Pages: |
1058-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kim JD |
Year: |
2008 |
Journal: |
BMC Mol Biol |
Title: |
Two evolutionarily conserved sequence elements for Peg3/Usp29 transcription. |
Volume: |
9 |
|
Pages: |
108 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Ubiquitin-specific peptidase 29 (USP29, MEROPS identifier C19.040) is a de-ubiquitinating enzyme that releases poly-ubiquitin from conjugates. The USP29 gene is activated by a the far upstream element binding protein (FBP) and JTV1, a subunit of the multi-aminoacyl-tRNA synthetase complex. USP29 is then able to stabilize p53 by removing ubiquitin, and accumulated p53 induces apoptosis []. USP29 is also important in the maintenance of genomic integrity because it de-ubiquitinates claspin. Ubiquitinated claspin is degraded by the proteasome, and upregulation of USP29 promotes claspin survival, whereas downregulation promotes claspin degradation []. USP29 knockdown also leads to impaired phosphorylation of Chk1 following DNA damage and cells show a major defect in S-phase progression []. USP29 is paternally imprinted in the mouse [], and conserved sequence element 1 (CSE-1) within the CpG island that surrounds the genes acts as a repressor for transcription of both the USP29 and PEG3 genes []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Formicola L |
Year: |
2014 |
Journal: |
Front Aging Neurosci |
Title: |
The extraocular muscle stem cell niche is resistant to ageing and disease. |
Volume: |
6 |
|
Pages: |
328 |
|
•
•
•
•
•
|
Publication |
First Author: |
Theka I |
Year: |
2017 |
Journal: |
Sci Rep |
Title: |
Reduced expression of Paternally Expressed Gene-3 enhances somatic cell reprogramming through mitochondrial activity perturbation. |
Volume: |
7 |
Issue: |
1 |
Pages: |
9705 |
|
•
•
•
•
•
|
Publication |
First Author: |
Weaver JR |
Year: |
2010 |
Journal: |
Mol Cell Biol |
Title: |
Domain-specific response of imprinted genes to reduced DNMT1. |
Volume: |
30 |
Issue: |
16 |
Pages: |
3916-28 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhou Q |
Year: |
2020 |
Journal: |
Mol Reprod Dev |
Title: |
Deletion of BAF250a affects oocyte epigenetic modifications and embryonic development. |
Volume: |
87 |
Issue: |
5 |
Pages: |
550-564 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lucifero D |
Year: |
2004 |
Journal: |
Hum Mol Genet |
Title: |
Gene-specific timing and epigenetic memory in oocyte imprinting. |
Volume: |
13 |
Issue: |
8 |
Pages: |
839-49 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kim J |
Year: |
2008 |
Journal: |
Hum Mol Genet |
Title: |
In vivo YY1 knockdown effects on genomic imprinting. |
Volume: |
17 |
Issue: |
3 |
Pages: |
391-401 |
|
•
•
•
•
•
|
Publication |
First Author: |
Henckel A |
Year: |
2009 |
Journal: |
Hum Mol Genet |
Title: |
Histone methylation is mechanistically linked to DNA methylation at imprinting control regions in mammals. |
Volume: |
18 |
Issue: |
18 |
Pages: |
3375-83 |
|
•
•
•
•
•
|
Publication |
First Author: |
Goyal A |
Year: |
2014 |
Journal: |
Matrix Biol |
Title: |
Reprint of: Decorin activates AMPK, an energy sensor kinase, to induce autophagy in endothelial cells. |
Volume: |
35 |
|
Pages: |
42-50 |
|
•
•
•
•
•
|
Publication |
First Author: |
Formicola L |
Year: |
2018 |
Journal: |
Front Physiol |
Title: |
Inhibition of the Activin Receptor Type-2B Pathway Restores Regenerative Capacity in Satellite Cell-Depleted Skeletal Muscle. |
Volume: |
9 |
|
Pages: |
515 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
198
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu J |
Year: |
2011 |
Journal: |
EMBO J |
Title: |
JTV1 co-activates FBP to induce USP29 transcription and stabilize p53 in response to oxidative stress. |
Volume: |
30 |
Issue: |
5 |
Pages: |
846-58 |
|
•
•
•
•
•
|
Publication |
First Author: |
Schüle B |
Year: |
2007 |
Journal: |
Am J Hum Genet |
Title: |
DLX5 and DLX6 expression is biallelic and not modulated by MeCP2 deficiency. |
Volume: |
81 |
Issue: |
3 |
Pages: |
492-506 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kim J |
Year: |
2004 |
Journal: |
Genomics |
Title: |
Lineage-specific imprinting and evolution of the zinc-finger gene ZIM2. |
Volume: |
84 |
Issue: |
1 |
Pages: |
47-58 |
|
•
•
•
•
•
|
Publication |
First Author: |
Luo YD |
Year: |
2022 |
Journal: |
Theranostics |
Title: |
Mutant Kras and mTOR crosstalk drives hepatocellular carcinoma development via PEG3/STAT3/BEX2 signaling. |
Volume: |
12 |
Issue: |
18 |
Pages: |
7903-7919 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kärst S |
Year: |
2015 |
Journal: |
BMC Genomics |
Title: |
The direction of cross affects [corrected] obesity after puberty in male but not female offspring. |
Volume: |
16 |
|
Pages: |
904 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
90
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Ramanathan P |
Year: |
2008 |
Journal: |
BMC Genomics |
Title: |
Transcriptome analysis identifies pathways associated with enhanced maternal performance in QSi5 mice. |
Volume: |
9 |
|
Pages: |
197 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
869
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
Title: |
Nomenclature Committee Use |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Expression Nervous System Atlas (GENSAT) Project, The Rockefeller University (New York, NY) |
Year: |
2005 |
Journal: |
Database Download |
Title: |
MGI download of GENSAT transgene data |
|
|
|
|
•
•
•
•
•
|