|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 501 to 587 out of 587 for Satb1

<< First    < Previous  |  Next >    Last >>
0.025s

Categories

Hits by Pathway

Hits by Category

Hits by Strain

Type Details Score
Publication
31073041 | J:277380
 
First Author: Telley L
Year: 2019
Journal: Science
Title: Temporal patterning of apical progenitors and their daughter neurons in the developing neocortex.
Volume: 364
Issue: 6440
•
•
•
•
•
Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
•
•
•
•
•
Publication
- | J:238766
     
First Author: Shanghai Model Organisms Center
Year: 2017
Journal: MGI Direct Data Submission
Title: Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China
•
•
•
•
•
Publication
16919269 | J:112701
First Author: Bailey PJ
Year: 2006
Journal: Exp Cell Res
Title: A global genomic transcriptional code associated with CNS-expressed genes.
Volume: 312
Issue: 16
Pages: 3108-19
•
•
•
•
•
Publication
22988430 | J:190636
 
First Author: Wiese CB
Year: 2012
Journal: Front Neurosci
Title: A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract.
Volume: 6
Pages: 130
•
•
•
•
•
Publication
15226823 | J:93300
First Author: Blackshaw S
Year: 2004
Journal: PLoS Biol
Title: Genomic analysis of mouse retinal development.
Volume: 2
Issue: 9
Pages: E247
•
•
•
•
•
Publication
20412781 | J:140465
First Author: Guo G
Year: 2010
Journal: Dev Cell
Title: Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.
Volume: 18
Issue: 4
Pages: 675-85
•
•
•
•
•
Publication
20059953 | J:156017
First Author: Yokoyama S
Year: 2009
Journal: Dev Cell
Title: A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Volume: 17
Issue: 6
Pages: 836-48
•
•
•
•
•
Publication
27626380 | J:236599
First Author: Dickinson ME
Year: 2016
Journal: Nature
Title: High-throughput discovery of novel developmental phenotypes.
Volume: 537
Issue: 7621
Pages: 508-514
•
•
•
•
•
Publication
- | J:73065
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2001
Title: Gene Ontology Annotation by the MGI Curatorial Staff
•
•
•
•
•
Publication
15618518 | J:91257
First Author: Gray PA
Year: 2004
Journal: Science
Title: Mouse brain organization revealed through direct genome-scale TF expression analysis.
Volume: 306
Issue: 5705
Pages: 2255-7
•
•
•
•
•
Publication
24952961 | J:215487
First Author: Thompson CL
Year: 2014
Journal: Neuron
Title: A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Volume: 83
Issue: 2
Pages: 309-323
•
•
•
•
•
Publication
24194600 | J:228563
First Author: Koscielny G
Year: 2014
Journal: Nucleic Acids Res
Title: The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Volume: 42
Issue: Database issue
Pages: D802-9
•
•
•
•
•
Publication
- | J:80155
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data
•
•
•
•
•
Publication
14681479 | J:122989
First Author: Visel A
Year: 2004
Journal: Nucleic Acids Res
Title: GenePaint.org: an atlas of gene expression patterns in the mouse embryo.
Volume: 32
Issue: Database issue
Pages: D552-6
•
•
•
•
•
Publication
34321999 | J:313619
 
First Author: Bedogni F
Year: 2021
Journal: Front Mol Neurosci
Title: Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development.
Volume: 14
Pages: 686034
•
•
•
•
•
Publication
- | J:204739
     
First Author: International Knockout Mouse Consortium
Year: 2014
Journal: Database Download
Title: MGI download of modified allele data from IKMC and creation of new knockout alleles
•
•
•
•
•
Publication
- | J:57656
     
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
•
•
•
•
•
Publication
- | J:171409
     
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
•
•
•
•
•
Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
•
•
•
•
•
Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
•
•
•
•
•
Publication
- | J:342604
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
•
•
•
•
•
Publication
16602821 | J:162220
First Author: Magdaleno S
Year: 2006
Journal: PLoS Biol
Title: BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Volume: 4
Issue: 4
Pages: e86
•
•
•
•
•
Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
•
•
•
•
•
Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
•
•
•
•
•
Publication
38355793 | J:345621
First Author: Adams DJ
Year: 2024
Journal: Nature
Title: Genetic determinants of micronucleus formation in vivo.
Volume: 627
Issue: 8002
Pages: 130-136
•
•
•
•
•
Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
•
•
•
•
•
Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
•
•
•
•
•
Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
•
•
•
•
•
Publication
- | J:326541
       
First Author: Cyagen Biosciences Inc.
Year: 2022
Title: Cyagen Biosciences Website.
•
•
•
•
•
Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
•
•
•
•
•
Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
•
•
•
•
•
Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
•
•
•
•
•
Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
•
•
•
•
•
Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
•
•
•
•
•
Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
•
•
•
•
•
Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
•
•
•
•
•
Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
•
•
•
•
•
Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
•
•
•
•
•
Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
•
•
•
•
•
Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
•
•
•
•
•
Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
•
•
•
•
•
Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
•
•
•
•
•
Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
•
•
•
•
•
Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
•
•
•
•
•
Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
•
•
•
•
•
Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
•
•
•
•
•
Protein
D3YZD1
Organism: Mus musculus/domesticus
Length: 154  
Fragment?: true
•
•
•
•
•
Publication
32669713 | J:292119
First Author: Li Z
Year: 2020
Journal: Nature
Title: N6-methyladenine in DNA antagonizes SATB1 in early development.
Volume: 583
Issue: 7817
Pages: 625-630
•
•
•
•
•
Protein
Q60611
Organism: Mus musculus/domesticus
Length: 764  
Fragment?: false
•
•
•
•
•
Protein
D3YU76
Organism: Mus musculus/domesticus
Length: 21  
Fragment?: true
•
•
•
•
•
Publication
31543366 | J:286177
First Author: Riessland M
Year: 2019
Journal: Cell Stem Cell
Title: Loss of SATB1 Induces p21-Dependent Cellular Senescence in Post-mitotic Dopaminergic Neurons.
Volume: 25
Issue: 4
Pages: 514-530.e8
•
•
•
•
•
Publication
19103759 | -
First Author: Purbey PK
Year: 2009
Journal: Mol Cell Biol
Title: Acetylation-dependent interaction of SATB1 and CtBP1 mediates transcriptional repression by SATB1.
Volume: 29
Issue: 5
Pages: 1321-37
•
•
•
•
•
Publication
10373541 | -
First Author: Liu J
Year: 1999
Journal: Mol Cell Biol
Title: Homeoproteins CDP and SATB1 interact: potential for tissue-specific regulation.
Volume: 19
Issue: 7
Pages: 4918-26
•
•
•
•
•
Publication
20884053 | J:167090
First Author: Yao X
Year: 2010
Journal: Mol Immunol
Title: The L2a element is a mouse CD8 silencer that interacts with MAR-binding proteins SATB1 and CDP.
Volume: 48
Issue: 1-3
Pages: 153-63
•
•
•
•
•
Publication
29772444 | -
 
First Author: Sunkara KP
Year: 2018
Journal: Biomed Pharmacother
Title: Functional relevance of SATB1 in immune regulation and tumorigenesis.
Volume: 104
Pages: 87-93
•
•
•
•
•
Publication
9218488 | J:41712
First Author: Banan M
Year: 1997
Journal: J Biol Chem
Title: Interaction of the nuclear matrix-associated region (MAR)-binding proteins, SATB1 and CDP/Cux, with a MAR element (L2a) in an upstream regulatory region of the mouse CD8a gene.
Volume: 272
Issue: 29
Pages: 18440-52
•
•
•
•
•
Publication
9792700 | J:50916
First Author: Chattopadhyay S
Year: 1998
Journal: J Biol Chem
Title: A nuclear matrix attachment region upstream of the T cell receptor beta gene enhancer binds Cux/CDP and SATB1 and modulates enhancer-dependent reporter gene expression but not endogenous gene expression.
Volume: 273
Issue: 45
Pages: 29838-46
•
•
•
•
•
Allele
Rr584<em2Itan> | MGI:7790509
Name: regulatory region 584; endonuclease-mediated mutation 2, Ichiro Taniuchi
Allele Type: Endonuclease-mediated
Attribute String: Modified regulatory region
•
•
•
•
•
Allele
Satb1<em1Smoc> | MGI:7292168
Name: special AT-rich sequence binding protein 1; endonuclease-mediated mutation 1, Shanghai Model Organisms Center
Allele Type: Endonuclease-mediated
Attribute String: Conditional ready, No functional change
•
•
•
•
•
Strain
MGI:7718239 | C57BL/6JSmoc-Satb1<em1Smoc>/Smoc
Attribute String: coisogenic, endonuclease-mediated mutation, mutant strain
•
•
•
•
•
Allele
Rr584<em1Itan> | MGI:7790505
Name: regulatory region 584; endonuclease-mediated mutation 1, Ichiro Taniuchi
Allele Type: Endonuclease-mediated
Attribute String: Modified regulatory region
•
•
•
•
•
Allele
Rr585<em1Itan> | MGI:7790506
Name: regulatory region 585; endonuclease-mediated mutation 1, Ichiro Taniuchi
Allele Type: Endonuclease-mediated
Attribute String: Modified regulatory region
•
•
•
•
•
Publication
14701874 | -
First Author: Dobreva G
Year: 2003
Journal: Genes Dev
Title: SUMO modification of a novel MAR-binding protein, SATB2, modulates immunoglobulin mu gene expression.
Volume: 17
Issue: 24
Pages: 3048-61
•
•
•
•
•
Publication
16630892 | -
First Author: Pavan Kumar P
Year: 2006
Journal: Mol Cell
Title: Phosphorylation of SATB1, a global gene regulator, acts as a molecular switch regulating its transcriptional activity in vivo.
Volume: 22
Issue: 2
Pages: 231-43
•
•
•
•
•
Publication
28139846 | -
First Author: Zarate YA
Year: 2017
Journal: Clin Genet
Title: Genotype and phenotype in 12 additional individuals with SATB2-associated syndrome.
Volume: 92
Issue: 4
Pages: 423-429
•
•
•
•
•
Publication
27774744 | -
First Author: Zarate YA
Year: 2017
Journal: Am J Med Genet A
Title: SATB2-associated syndrome: Mechanisms, phenotype, and practical recommendations.
Volume: 173
Issue: 2
Pages: 327-337
•
•
•
•
•
Publication
29306014 | -
 
First Author: Frömberg A
Year: 2018
Journal: Cancer Lett
Title: The Special AT-rich Sequence Binding Protein 1 (SATB1) and its role in solid tumors.
Volume: 417
Pages: 96-111
•
•
•
•
•
Protein Domain
IPR039673 | SATB1/SATB2
Type: Family
Description: This entry includes SATB1/2 from animals. SATB1 is a global gene regulator that acts as a "docking site"for several chromatin remodeling enzymes and recruits corepressors (HDACs) or coactivators (HATs) directly to promoters []. SATB1 can bind DNA specifically to the consensus SATB1-binding sequence (CSBS) consisting of two 5'-TAATA-3' half-sites that are arranged as inverted repeats flanking a central cytosine or guanine. It can also bind DNA non-specifically []. SATB1 has been shown to bind to the nuclear matrix attachment regions (MARs) of the immunoglobulin heavy chain intronic enhancer [], while SATB2 has been shown to bind to the MARs of the endogenous immunoglobulin micro locus in pre-B cells and enhances gene expression [].SATB1 is an identified oncogene, its increased expression is associated with poor prognosis in many cancers []. Mutations in the SATB2 gene cause SATB2-associated syndrome (SAS), characterised by developmental delay/intellectual disability with absent or limited speech development, craniofacial abnormalities, behavioral problems, dysmorphic features, and palatal and dental abnormalities [, ].
•
•
•
•
•
Protein Domain
IPR038216 | SATB_CUTL_sf
Type: Homologous_superfamily
Description: This superfamily represents a domain found in SATB (special AT-rich sequence-binding) proteins that are global chromatin organisers and gene expression regulators essential for T-cell development and breast cancer tumour growth and metastasis. The N terminus of SATB1 (residues 90-204) is made up of ULD and CUTL domains. This entry represents the CUTL (CUT repeat-like) domain, which shares structure similarity with the CUT1 domain and has the evolutionarily conserved amino acids involved in CUT1 DNA binding [, ]. This domain is essential for the contact between DNA and SATB1.
•
•
•
•
•
Protein
H3BJX4
Organism: Mus musculus/domesticus
Length: 104  
Fragment?: true
•
•
•
•
•
Publication
38536932 | J:352379
First Author: Lee S
Year: 2024
Journal: Sci Adv
Title: CRIF1 deficiency induces FOXP3(LOW) inflammatory non-suppressive regulatory T cells, thereby promoting antitumor immunity.
Volume: 10
Issue: 13
Pages: eadj9600
•
•
•
•
•
Publication
30643266 | J:282453
First Author: Konopacki C
Year: 2019
Journal: Nat Immunol
Title: Transcription factor Foxp1 regulates Foxp3 chromatin binding and coordinates regulatory T cell function.
Volume: 20
Issue: 2
Pages: 232-242
•
•
•
•
•
Publication
28078709 | J:269911
First Author: Sweeney NT
Year: 2019
Journal: J Comp Neurol
Title: Expression of transcription factors divides retinal ganglion cells into distinct classes.
Volume: 527
Issue: 1
Pages: 225-235
•
•
•
•
•
Protein
Q8VI24
Organism: Mus musculus/domesticus
Length: 733  
Fragment?: false
•
•
•
•
•
Protein
E9PVB7
Organism: Mus musculus/domesticus
Length: 795  
Fragment?: false
•
•
•
•
•
Protein
Q546B3
Organism: Mus musculus/domesticus
Length: 733  
Fragment?: false
•
•
•
•
•
Publication
25124042 | -
First Author: Wang Z
Year: 2014
Journal: J Biol Chem
Title: Crystal structure of the ubiquitin-like domain-CUT repeat-like tandem of special AT-rich sequence binding protein 1 (SATB1) reveals a coordinating DNA-binding mechanism.
Volume: 289
Issue: 40
Pages: 27376-85
•
•
•
•
•
Publication
10950932 | J:64119
First Author: Chattopadhyay S
Year: 2000
Journal: Genomics
Title: SMAR1, a novel, alternatively spliced gene product, binds the Scaffold/Matrix-associated region at the T cell receptor beta locus.
Volume: 68
Issue: 1
Pages: 93-6
•
•
•
•
•
Publication
23747796 | J:207061
First Author: Stahl J
Year: 2013
Journal: Matrix Biol
Title: Leucine rich amelogenin peptide alters ameloblast differentiation in vivo.
Volume: 32
Issue: 7-8
Pages: 432-42
•
•
•
•
•
Publication
34244292 | J:310075
First Author: Antonio Urrutia G
Year: 2021
Journal: Genes Dev
Title: ZFP451-mediated SUMOylation of SATB2 drives embryonic stem cell differentiation.
Volume: 35
Issue: 15-16
Pages: 1142-1160
•
•
•
•
•
Publication
21799768 | J:176261
First Author: Son JS
Year: 2011
Journal: PLoS One
Title: Enhanced chromatin accessibility and recruitment of JUNB mediate the sustained IL-4 expression in NFAT1 deficient T helper 2 cells.
Volume: 6
Issue: 7
Pages: e22042
•
•
•
•
•
Publication
30171602 | J:269342
First Author: Liu J
Year: 2019
Journal: Immunology
Title: Deceleration of glycometabolism impedes IgG-producing B-cell-mediated tumor elimination by targeting SATB1.
Volume: 156
Issue: 1
Pages: 56-68
•
•
•
•
•
Protein
H3BKH3
Organism: Mus musculus/domesticus
Length: 615  
Fragment?: false
•
•
•
•
•
Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
•
•
•
•
•
Publication
21183079 | J:292518
First Author: Huttlin EL
Year: 2010
Journal: Cell
Title: A tissue-specific atlas of mouse protein phosphorylation and expression.
Volume: 143
Issue: 7
Pages: 1174-89
•
•
•
•
•
Publication
19468303 | -
First Author: Church DM
Year: 2009
Journal: PLoS Biol
Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.
Volume: 7
Issue: 5
Pages: e1000112
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom