| Type |
Details |
Score |
| Publication |
| First Author: |
Touma M |
| Year: |
2007 |
| Journal: |
J Immunol |
| Title: |
Importance of the CD3gamma ectodomain terminal beta-strand and membrane proximal stalk in thymic development and receptor assembly. |
| Volume: |
178 |
| Issue: |
6 |
| Pages: |
3668-79 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Brodeur JF |
| Year: |
2009 |
| Journal: |
J Immunol |
| Title: |
Critical and multiple roles for the CD3epsilon intracytoplasmic tail in double negative to double positive thymocyte differentiation. |
| Volume: |
182 |
| Issue: |
8 |
| Pages: |
4844-53 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Homologous_superfamily |
| Description: |
The Escherichia coli Ada protein repairs O6-methylguanine residues and methyl phosphotriesters in DNA by direct transfer of the methyl group to a cysteine residue. This domain contains four conserved cysteines that form a zinc binding site [, ]. One of these cysteines is a methyl group acceptor. The methylated domain can then specifically bind to the ada box on a DNA duplex. The zinc binding site is located in the N-terminal region and consists of four beta strands [].The methylation of the N-terminal site of Ada induces a structural change, which is independent of the transferred methyl group but enhances the promoter affinity of a remodeled surface region, trigger of the transcriptional enhancement of the ada regulon [, ].This superfamily represents the N-terminal domain of the Ada domain as well as the C-terminal domain of some ribosomal proteins (L17 from Actinobacteria and S1 from Candidatus Peregrinibacteria). |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Schumann T |
| Year: |
2023 |
| Journal: |
J Exp Med |
| Title: |
Deficiency for SAMHD1 activates MDA5 in a cGAS/STING-dependent manner. |
| Volume: |
220 |
| Issue: |
1 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Qin X |
| Year: |
2000 |
| Journal: |
Jpn J Cancer Res |
| Title: |
Protection against malignant progression of spontaneously developing liver tumors in transgenic mice expressing O(6)-methylguanine-DNA methyltransferase. |
| Volume: |
91 |
| Issue: |
11 |
| Pages: |
1085-9 |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Ada/Ada Tg(Afp-ADA)#Xiay/? |
| Background: |
involves: 129S7/SvEvBrd * C3H/HeJ * C57BL/6J |
| Zygosity: |
cx |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Pan Q |
| Year: |
2006 |
| Journal: |
Mol Immunol |
| Title: |
Different role for mouse and human CD3delta/epsilon heterodimer in preT cell receptor (preTCR) function: human CD3delta/epsilon heterodimer restores the defective preTCR function in CD3gamma- and CD3gammadelta-deficient mice. |
| Volume: |
43 |
| Issue: |
11 |
| Pages: |
1741-50 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Haks MC |
| Year: |
1999 |
| Journal: |
Immunity |
| Title: |
Pre-TCR signaling and inactivation of p53 induces crucial cell survival pathways in pre-T cells. |
| Volume: |
11 |
| Issue: |
1 |
| Pages: |
91-101 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hagenbeek TJ |
| Year: |
2004 |
| Journal: |
J Exp Med |
| Title: |
The loss of PTEN allows TCR alphabeta lineage thymocytes to bypass IL-7 and Pre-TCR-mediated signaling. |
| Volume: |
200 |
| Issue: |
7 |
| Pages: |
883-94 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jacobs H |
| Year: |
1999 |
| Journal: |
J Exp Med |
| Title: |
PIM1 reconstitutes thymus cellularity in interleukin 7- and common gamma chain-mutant mice and permits thymocyte maturation in Rag- but not CD3gamma-deficient mice. |
| Volume: |
190 |
| Issue: |
8 |
| Pages: |
1059-68 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Geiger JD |
| Year: |
1986 |
| Journal: |
FEBS Lett |
| Title: |
Lack of adenosine deaminase deficiency in the mutant mouse wasted. |
| Volume: |
208 |
| Issue: |
2 |
| Pages: |
431-4 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhou CC |
| Year: |
2012 |
| Journal: |
PLoS One |
| Title: |
Targeted expression of Cre recombinase provokes placental-specific DNA recombination in transgenic mice. |
| Volume: |
7 |
| Issue: |
2 |
| Pages: |
e29236 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ishikawa T |
| Year: |
2004 |
| Journal: |
Cancer Sci |
| Title: |
DNA repair and cancer: lessons from mutant mouse models. |
| Volume: |
95 |
| Issue: |
2 |
| Pages: |
112-7 |
|
•
•
•
•
•
|
| Allele |
| Name: |
transgene insertion 5, Yang Xia |
| Allele Type: |
Transgenic |
| Attribute String: |
Recombinase |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Chora ÂF |
| Year: |
2023 |
| Journal: |
Immunity |
| Title: |
Interplay between liver and blood stages of Plasmodium infection dictates malaria severity via γδ T cells and IL-17-promoted stress erythropoiesis. |
| Volume: |
56 |
| Issue: |
3 |
| Pages: |
592-605.e8 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
432
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
232
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
164
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Piña B |
| Year: |
1993 |
| Journal: |
Mol Cell Biol |
| Title: |
ADA3: a gene, identified by resistance to GAL4-VP16, with properties similar to and different from those of ADA2. |
| Volume: |
13 |
| Issue: |
10 |
| Pages: |
5981-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Nag A |
| Year: |
2007 |
| Journal: |
J Biol Chem |
| Title: |
An essential role of human Ada3 in p53 acetylation. |
| Volume: |
282 |
| Issue: |
12 |
| Pages: |
8812-20 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
This entry is found in Ada3 and homologous proteins which function as part of histone acetyltransferase complexes []. Ada3 is an essential component of the Ada transcriptional coactivator (alteration/deficiency in activation) complex. It plays a key role in linking histone acetyltransferase-containing complexes to p53 (tumour suppressor protein) thereby regulating p53 acetylation, stability and transcriptional activation following DNA damage []. |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
congenic, transgenic, mutant strain |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Ada/Ada Adora2b/Adora2b Tg(Afp-ADA)#Xiay/? |
| Background: |
involves: 129P2/OlaHsd * 129S7/SvEvBrd * C3H/HeJ * C57BL/6J |
| Zygosity: |
cx |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bowles T |
| Year: |
2008 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Structure and DNA binding of alkylation response protein AidB. |
| Volume: |
105 |
| Issue: |
40 |
| Pages: |
15299-304 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Krasko A |
| Year: |
1998 |
| Journal: |
J Mol Evol |
| Title: |
Identification and expression of the SOS response, aidB-like, gene in the marine sponge Geodia cydonium: implication for the phylogenetic relationships of metazoan acyl-CoA dehydrogenases and acyl-CoA oxidases. |
| Volume: |
47 |
| Issue: |
3 |
| Pages: |
343-52 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Volkert MR |
| Year: |
1988 |
| Journal: |
Environ Mol Mutagen |
| Title: |
Adaptive response of Escherichia coli to alkylation damage. |
| Volume: |
11 |
| Issue: |
2 |
| Pages: |
241-55 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kleibl K |
| Year: |
2002 |
| Journal: |
Mutat Res |
| Title: |
Molecular mechanisms of adaptive response to alkylating agents in Escherichia coli and some remarks on O(6)-methylguanine DNA-methyltransferase in other organisms. |
| Volume: |
512 |
| Issue: |
1 |
| Pages: |
67-84 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ma DK |
| Year: |
2015 |
| Journal: |
Cell |
| Title: |
Acyl-CoA Dehydrogenase Drives Heat Adaptation by Sequestering Fatty Acids. |
| Volume: |
161 |
| Issue: |
5 |
| Pages: |
1152-1163 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
AidB is one of several genes involved in the SOS adaptive response to DNA alkylation damage, whose expression is activated by the Ada protein [, ]. Its function has not been entirely elucidated; however, it is similar in sequence and function to acyl-CoA dehydrogenases [, ]. It has been proposed that aidB directly destroys DNA alkylating agents such as nitrosoguanidines (nitrosated amides) or their reaction intermediates [, ]. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Li S |
| Year: |
2000 |
| Journal: |
Gene |
| Title: |
A family of genes with growth factor and adenosine deaminase similarity are preferentially expressed in the salivary glands of Glossina m. morsitans. |
| Volume: |
252 |
| Issue: |
1-2 |
| Pages: |
83-93 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Iijima R |
| Year: |
2008 |
| Journal: |
J Biol Chem |
| Title: |
The extracellular adenosine deaminase growth factor, ADGF/CECR1, plays a role in Xenopus embryogenesis via the adenosine/P1 receptor. |
| Volume: |
283 |
| Issue: |
4 |
| Pages: |
2255-64 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhang J |
| Year: |
2007 |
| Journal: |
Insect Mol Biol |
| Title: |
Molecular characterization of MbADGF, a novel member of the adenosine deaminase-related growth factor in the cabbage armyworm, Mamestra brassicae: the functional roles in the midgut cell proliferation. |
| Volume: |
16 |
| Issue: |
3 |
| Pages: |
351-60 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Akalal DB |
| Year: |
2004 |
| Journal: |
Curr Pharm Des |
| Title: |
Mollusk-derived growth factor and the new subfamily of adenosine deaminase-related growth factors. |
| Volume: |
10 |
| Issue: |
31 |
| Pages: |
3893-900 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Dolezal T |
| Year: |
2005 |
| Journal: |
PLoS Biol |
| Title: |
A role for adenosine deaminase in Drosophila larval development. |
| Volume: |
3 |
| Issue: |
7 |
| Pages: |
e201 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, molluscs, and vertebrates [].Adenosine deaminase-related growth factors (ADGF) are also known as CECR1 in vertebrates. They are a novel family of growth factors with sequence similarity to classical cellular adenosine deaminase. In Xenopus, it is essential for growth factor activity and is expressed in the somites, pronephros, eyes, cement gland, neural tube, and neural floor plate of the embryos []. It is also essential for insect development []. The mollusc derived growth factor (MDGF) is a member of the adenosine deaminase-related growth factor (ADGF) subfamily. ADGFs from vertebrates and invertebrates contain both an ADA domain and a novel N-terminal region of about 100 amino acids []. Adenosine deaminase (ADA) is an enzyme that catalyses the irreversible deamination of adenosine and deoxyadenosine to inosine and deoxyinosine []. Catalytic residues involved in ADA activity are conserved in ADGFs, and inhibitors of ADA can block ADGF activity []. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kusuyama J |
| Year: |
2021 |
| Journal: |
Cell Metab |
| Title: |
Placental superoxide dismutase 3 mediates benefits of maternal exercise on offspring health. |
| Volume: |
33 |
| Issue: |
5 |
| Pages: |
939-956.e8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Xu P |
| Year: |
2023 |
| Journal: |
Cell Prolif |
| Title: |
AMPK regulates homeostasis of invasion and viability in trophoblasts by redirecting glucose metabolism: Implications for pre-eclampsia. |
| Volume: |
56 |
| Issue: |
2 |
| Pages: |
e13358 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wiper-Bergeron N |
| Year: |
2007 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Glucocorticoid-stimulated preadipocyte differentiation is mediated through acetylation of C/EBPbeta by GCN5. |
| Volume: |
104 |
| Issue: |
8 |
| Pages: |
2703-8 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
211
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
66
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
118
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
This entry includes histone acetyltransferases GCN5, KAT2A and KAT2B (all of which are included in ). GCN5 acetylates histones H2B, H3 and H4, providing a specific tag for epigenetic transcription activation. GCN5 is a component of the transcription regulatory histone acetylation (HAT) complexes SAGA [], SLIK [], SALSA []and ADA []. Mammals have two paralogues: KAT2A (also known as GCN5) and KAT2B. KAT2A acetylates core histones to provide a specific tag for epigenetic transcription activation, but not nucleosome core particles. It also acetylates proteins such as CEBPB []. KAT2A is a component of the ATAC complex, which has acetyltransferase activity on histones H3 and H4 []. KAT2B (also known as P300/calcium-binding protein (CBP)-associated factor or PCAF) can acetylate the core histones H3 and H4 as well as nucleosome core particles and non-histone proteins such as ACLY [].The transcription regulatory histone acetylation complex Spt-Ada-Gcn5 acetyltransferase (SAGA) is involved in RNA polymerase II-dependent transcriptional regulation of approximately 10% of yeast genes. SAGA preferentially acetylates histones H3 and H2B and deubiquitinates histone H2B []. SAGA is known as PCAF in vertebrates and PCAF acetylates nucleosomal histone H3 []. The SAGA complex consists of at least TRA1, CHD1, SPT7, TAF5, ADA3, SGF73, SPT20/ADA5, SPT8, TAF12, TAF6, HFI1/ADA1, UBP8, GCN5, ADA2, SPT3, SGF29, TAF10, TAF9, SGF11 and SUS1, and some of these components are present as two copies. The complex is built up from distinct modules, each of which has a separate function and crosslinks with either other proteins or other modules in the complex [].SLIK (SAGA-like) is a multi-subunit histone acetyltransferase complex that preferentially acetylates histones H3 and H2B and deubiquitinates histone H2B. It is an embellishment of the SAGA complex. The yeast SLIK complex consists of at least TRA1, CHD1, SPT7, CC TAF5, ADA3, SPT20, RTG2, TAF12, TAF6, HFI1, UBP8 (a deubiquitinase), GCN5, ADA2, SPT3, SGF29, TAF10 and TAF9 [, ].The yeast SALSA complex is an altered form of the SAGA complex and consists of at least TRA1, SPT7 (C-terminal truncated form), TAF5, ADA3, SPT20, TAF12, TAF6, HFI1, GCN5, ADA2 and SPT3 [].The ADA complex is a transcription regulatory histone acetylation (HAT) complex. ADA preferentially acetylates nucleosomal histones H3 (at 'Lys-14' and 'Lys-18') and H2B. The complex consists of at least ADA2, ADA3, AHC1, and GCN5. AHC1 is required for the overall structural integrity of the ADA complex []. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Fukushima S |
| Year: |
2001 |
| Journal: |
Mutat Res |
| Title: |
Possible involvement of O6-methylguanine formation and p53 dysfunction in mouse urinary bladder carcinogenesis. |
| Volume: |
477 |
| Issue: |
1-2 |
| Pages: |
125-30 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ben-Shooshan I |
| Year: |
1998 |
| Journal: |
Comp Biochem Physiol B Biochem Mol Biol |
| Title: |
The CP-I subunit of adenosine deaminase complexing protein from calf kidney is identical to human, mouse, and rat dipeptidyl peptidase IV. |
| Volume: |
119 |
| Issue: |
2 |
| Pages: |
289-92 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
376
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
345
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
329
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
376
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
340
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tascou S |
| Year: |
2000 |
| Journal: |
Cytogenet Cell Genet |
| Title: |
Isolation and characterization of a novel human gene, NIF3L1, and its mouse ortholog, Nif3l1, highly conserved from bacteria to mammals. |
| Volume: |
90 |
| Issue: |
3-4 |
| Pages: |
330-6 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Martens JA |
| Year: |
1996 |
| Journal: |
J Biol Chem |
| Title: |
Transcriptional activation by yeast PDR1p is inhibited by its association with NGG1p/ADA3p. |
| Volume: |
271 |
| Issue: |
27 |
| Pages: |
15884-90 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Choi HP |
| Year: |
2013 |
| Journal: |
PLoS One |
| Title: |
Biochemical Characterization of Hypothetical Proteins from Helicobacter pylori. |
| Volume: |
8 |
| Issue: |
6 |
| Pages: |
e66605 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kuan SM |
| Year: |
2013 |
| Journal: |
Acta Crystallogr Sect F Struct Biol Cryst Commun |
| Title: |
Crystallization and preliminary X-ray diffraction analysis of the Nif3-family protein MJ0927 from Methanocaldococcus jannaschii. |
| Volume: |
69 |
| Issue: |
Pt 1 |
| Pages: |
80-2 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Chen SC |
| Year: |
2014 |
| Journal: |
Biomed Res Int |
| Title: |
Crystal structure of a conserved hypothetical protein MJ0927 from Methanocaldococcus jannaschii reveals a novel quaternary assembly in the Nif3 family. |
| Volume: |
2014 |
|
| Pages: |
171263 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Reed CJ |
| Year: |
2021 |
| Journal: |
Biomolecules |
| Title: |
Comparative Genomic Analysis of the DUF34 Protein Family Suggests Role as a Metal Ion Chaperone or Insertase. |
| Volume: |
11 |
| Issue: |
9 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lin R |
| Year: |
2013 |
| Journal: |
Mol Cell |
| Title: |
Acetylation stabilizes ATP-citrate lyase to promote lipid biosynthesis and tumor growth. |
| Volume: |
51 |
| Issue: |
4 |
| Pages: |
506-518 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Grant PA |
| Year: |
1999 |
| Journal: |
J Biol Chem |
| Title: |
Expanded lysine acetylation specificity of Gcn5 in native complexes. |
| Volume: |
274 |
| Issue: |
9 |
| Pages: |
5895-900 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Grant PA |
| Year: |
1998 |
| Journal: |
Mol Cell |
| Title: |
The ATM-related cofactor Tra1 is a component of the purified SAGA complex. |
| Volume: |
2 |
| Issue: |
6 |
| Pages: |
863-7 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
This family includes DUF34/metal-binding proteins from bacteria, NIF3 from budding yeasts and NIF3-like proteins from animals. This entry includes the DUF34/metal-binding protein/NIF3 proteins, which are widely distributed across superkingdoms. They were previously annotated as GTP cyclohydrolase 1 type 2 []and, recently, through a comprehensive literature review and integrative bioinformatic analyses it was revealed that annotations for these members are misleading as they were based on a single set of in vitro results examining the NIF3 homolog of Helicobacter pylori []. Actually, they have varied phenotypes with the unifying functional role as metal-binding proteins [].NIF3 interacts with the yeast transcriptional coactivator Ngg1p which is part of the ADA complex, the exact function of this interaction is unknown [, ].The structure of the Methanocaldococcus jannaschii MJ0927 NIF3 protein has been determined [, ]. It binds to both single-stranded and double-stranded DNA []. |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
This family represents DUF34/metal-binding proteins (previously known as GTP cyclohydrolase 1 type 2) from bacteria.This entry includes the DUF34/metal-binding protein/NIF3 proteins, which are widely distributed across superkingdoms. They were previously annotated as GTP cyclohydrolase 1 type 2 []and, recently, through a comprehensive literature review and integrative bioinformatic analyses it was revealed that annotations for these members are misleading as they were based on a single set of in vitro results examining the NIF3 homolog of Helicobacter pylori []. Actually, they have varied phenotypes with the unifying functional role as metal-binding proteins [].NIF3 interacts with the yeast transcriptional coactivator Ngg1p which is part of the ADA complex, the exact function of this interaction is unknown [, ]. |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
This entry represents DUF34/metal-binding proteins (also referred to as NIF3-like protein 1) from animals. They share protein sequence similarity with budding yeast NIF3, which interacts with the yeast transcriptional coactivator Ngg1p that is part of the ADA complex [, ].This entry includes the DUF34/metal-binding protein/NIF3 proteins, which are widely distributed across superkingdoms. They were previously annotated as GTP cyclohydrolase 1 type 2 []and, recently, through a comprehensive literature review and integrative bioinformatic analyses it was revealed that annotations for these members are misleading as they were based on a single set of in vitro results examining the NIF3 homologue of Helicobacter pylori []. Actually, they have varied phenotypes with the unifying functional role as metal-binding proteins []. |
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| Protein Domain |
| Type: |
Homologous_superfamily |
| Description: |
This superfamily includes DUF34/metal-binding proteins (also known as GTP cyclohydrolase 1 type 2 proteins) from bacteria, NIF3 from budding yeasts and NIF3-like proteins from animals.This entry includes the DUF34/metal-binding protein/NIF3 proteins, which are widely distributed across superkingdoms. They were previously annotated as GTP cyclohydrolase 1 type 2 []and, recently, through a comprehensive literature review and integrative bioinformatic analyses it was revealed that annotations for these members are misleading as they were based on a single set of in vitro results examining the NIF3 homolog of Helicobacter pylori []. Actually, they have varied phenotypes with the unifying functional role as metal-binding proteins [].NIF3 interacts with the yeast transcriptional coactivator Ngg1p which is part of the ADA complex, the exact function of this interaction is unknown [, ]. |
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
131
 |
| Fragment?: |
true |
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
155
 |
| Fragment?: |
false |
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
159
 |
| Fragment?: |
false |
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| Publication |
| First Author: |
Phillips RJS |
| Year: |
1976 |
| Journal: |
Mouse News Lett |
| Title: |
New A-alleles |
| Volume: |
55 |
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| Pages: |
14 |
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•
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| Publication |
| First Author: |
Wallace RP |
| Year: |
2024 |
| Journal: |
Cell Rep Med |
| Title: |
Synthetically mannosylated antigens induce antigen-specific humoral tolerance and reduce anti-drug antibody responses to immunogenic biologics. |
| Volume: |
5 |
| Issue: |
1 |
| Pages: |
101345 |
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•
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| Publication |
| First Author: |
Jhanwar SC |
| Year: |
1989 |
| Journal: |
Cytogenet Cell Genet |
| Title: |
Localization of human adenosine deaminase (ADA) gene sequences to the q12----q13.11 region of chromosome 20 by in situ hybridization. |
| Volume: |
50 |
| Issue: |
2-3 |
| Pages: |
168-71 |
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•
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| Publication |
| First Author: |
Lee S |
| Year: |
1994 |
| Journal: |
Biochem Biophys Res Commun |
| Title: |
Cloning of human and mouse brain cDNAs coding for S1, the second member of the mammalian elongation factor-1 alpha gene family: analysis of a possible evolutionary pathway. |
| Volume: |
203 |
| Issue: |
3 |
| Pages: |
1371-7 |
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•
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| Publication |
| First Author: |
Péladeau C |
| Year: |
2020 |
| Journal: |
Nat Commun |
| Title: |
Identification of therapeutics that target eEF1A2 and upregulate utrophin A translation in dystrophic muscles. |
| Volume: |
11 |
| Issue: |
1 |
| Pages: |
1990 |
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| Allele |
| Name: |
eukaryotic translation elongation factor 1 alpha 2; wasted |
| Allele Type: |
Spontaneous |
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| Publication |
| First Author: |
Shultz LD |
| Year: |
1982 |
| Journal: |
Nature |
| Title: |
'Wasted', a new mutant of the mouse with abnormalities characteristic to ataxia telangiectasia. |
| Volume: |
297 |
| Issue: |
5865 |
| Pages: |
402-4 |
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•
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| Publication |
| First Author: |
Potter M |
| Year: |
1998 |
| Journal: |
Cell Immunol |
| Title: |
The wst gene regulates multiple forms of thymocyte apoptosis. |
| Volume: |
188 |
| Issue: |
2 |
| Pages: |
111-7 |
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•
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| Publication |
| First Author: |
Griffiths LA |
| Year: |
2012 |
| Journal: |
PLoS One |
| Title: |
Haploinsufficiency for translation elongation factor eEF1A2 in aged mouse muscle and neurons is compatible with normal function. |
| Volume: |
7 |
| Issue: |
7 |
| Pages: |
e41917 |
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| Publication |
| First Author: |
Kaiserlian D |
| Year: |
1985 |
| Journal: |
J Immunol |
| Title: |
The wasted mutant mouse. I. An animal model of secretory IgA deficiency with normal serum IgA. |
| Volume: |
135 |
| Issue: |
2 |
| Pages: |
1126-31 |
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•
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| Publication |
| First Author: |
Sweet HO |
| Year: |
1981 |
| Journal: |
Mouse News Lett |
| Title: |
Wasted (wst) |
| Volume: |
65 |
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| Pages: |
27 |
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•
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| Publication |
| First Author: |
Doig J |
| Year: |
2013 |
| Journal: |
FEBS J |
| Title: |
In vivo characterization of the role of tissue-specific translation elongation factor 1A2 in protein synthesis reveals insights into muscle atrophy. |
| Volume: |
280 |
| Issue: |
24 |
| Pages: |
6528-40 |
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•
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| Publication |
| First Author: |
Thacker J |
| Year: |
1984 |
| Journal: |
Mouse News Lett |
| Title: |
Radiation sensitivity of cells cultured from 'wasted` mice |
| Volume: |
70 |
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| Pages: |
80 |
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•
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| Publication |
| First Author: |
Inoue T |
| Year: |
1986 |
| Journal: |
Cancer Res |
| Title: |
Effect of DNA-damaging agents on isolated spleen cells and lung fibroblasts from the mouse mutant "wasted," a putative animal model for ataxia-telangiectasia. |
| Volume: |
46 |
| Issue: |
8 |
| Pages: |
3979-82 |
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| Publication |
| First Author: |
Tezuka H |
| Year: |
1986 |
| Journal: |
Mutat Res |
| Title: |
Evaluation of the mouse mutant "wasted" as an animal model for ataxia telangiectasia. I. Age-dependent and tissue-specific effects. |
| Volume: |
161 |
| Issue: |
1 |
| Pages: |
83-90 |
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| Publication |
| First Author: |
Newbery HJ |
| Year: |
2007 |
| Journal: |
J Biol Chem |
| Title: |
Translation elongation factor eEF1A2 is essential for post-weaning survival in mice. |
| Volume: |
282 |
| Issue: |
39 |
| Pages: |
28951-9 |
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| Publication |
| First Author: |
Hafezparast M |
| Year: |
1998 |
| Journal: |
Trends Genet |
| Title: |
Wasted by an elongation factor. |
| Volume: |
14 |
| Issue: |
6 |
| Pages: |
215-7 |
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| Publication |
| First Author: |
Woloschak GE |
| Year: |
1996 |
| Journal: |
Carcinogenesis |
| Title: |
Regulation of thymus PCNA expression is altered in radiation-sensitive wasted mice. |
| Volume: |
17 |
| Issue: |
11 |
| Pages: |
2357-65 |
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| Publication |
| First Author: |
Nordeen SK |
| Year: |
1984 |
| Journal: |
Mutat Res |
| Title: |
Evaluations of wasted mouse fibroblasts and SV-40 transformed human fibroblasts as models of ataxia telangiectasia in vitro. |
| Volume: |
140 |
| Issue: |
4 |
| Pages: |
219-22 |
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| Publication |
| First Author: |
Abbott CM |
| Year: |
1986 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Deficiency of adenosine deaminase in the wasted mouse. |
| Volume: |
83 |
| Issue: |
3 |
| Pages: |
693-5 |
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| Publication |
| First Author: |
Chambers DM |
| Year: |
1998 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
The lethal mutation of the mouse wasted (wst) is a deletion that abolishes expression of a tissue-specific isoform of translation elongation factor 1alpha, encoded by the Eef1a2 gene. |
| Volume: |
95 |
| Issue: |
8 |
| Pages: |
4463-8 |
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| Publication |
| First Author: |
Khalyfa A |
| Year: |
2001 |
| Journal: |
J Biol Chem |
| Title: |
Characterization of elongation factor-1A (eEF1A-1) and eEF1A-2/S1 protein expression in normal and wasted mice. |
| Volume: |
276 |
| Issue: |
25 |
| Pages: |
22915-22 |
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| Publication |
| First Author: |
Newbery HJ |
| Year: |
2005 |
| Journal: |
J Neuropathol Exp Neurol |
| Title: |
Progressive loss of motor neuron function in wasted mice: effects of a spontaneous null mutation in the gene for the eEF1 A2 translation factor. |
| Volume: |
64 |
| Issue: |
4 |
| Pages: |
295-303 |
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| Publication |
| First Author: |
Libertin CR |
| Year: |
1994 |
| Journal: |
Mol Immunol |
| Title: |
Cytokine and T-cell subset abnormalities in immunodeficient wasted mice. |
| Volume: |
31 |
| Issue: |
10 |
| Pages: |
753-9 |
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| Publication |
| First Author: |
Kaiserlian D |
| Year: |
1986 |
| Journal: |
Clin Exp Immunol |
| Title: |
The wasted mutant mouse. II. Immunological abnormalities in a mouse described as a model of ataxia-telangiectasia. |
| Volume: |
63 |
| Issue: |
3 |
| Pages: |
562-9 |
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| Genotype |
| Symbol: |
Eef1a2/Eef1a2 |
| Background: |
B6C3Fe a/a-Eef1a2/J |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
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•
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| Genotype |
| Symbol: |
Eef1a2/Eef1a2 |
| Background: |
involves: HRS/J |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
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•
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•
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| Genotype |
| Symbol: |
Eef1a2/Eef1a2 |
| Background: |
Not Specified |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
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| Publication |
| First Author: |
Guelman S |
| Year: |
2009 |
| Journal: |
Mol Cell Biol |
| Title: |
The double-histone-acetyltransferase complex ATAC is essential for mammalian development. |
| Volume: |
29 |
| Issue: |
5 |
| Pages: |
1176-88 |
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•
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
116
 |
| Fragment?: |
true |
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•
•
•
•
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
660
 |
| Fragment?: |
true |
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| Strain |
| Attribute String: |
mutant stock, spontaneous mutation |
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| Publication |
| First Author: |
van Buul PP |
| Year: |
1991 |
| Journal: |
Mutat Res |
| Title: |
Cytogenetic characterization of radiosensitive mouse mutants. |
| Volume: |
251 |
| Issue: |
2 |
| Pages: |
171-9 |
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•
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| Publication |
| First Author: |
Zhong J |
| Year: |
2013 |
| Journal: |
Diabetes |
| Title: |
A potential role for dendritic cell/macrophage-expressing DPP4 in obesity-induced visceral inflammation. |
| Volume: |
62 |
| Issue: |
1 |
| Pages: |
149-57 |
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•
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| Publication |
| First Author: |
Luo X |
| Year: |
2012 |
| Journal: |
Cardiovasc Res |
| Title: |
Increased plasma S-adenosyl-homocysteine levels induce the proliferation and migration of VSMCs through an oxidative stress-ERK1/2 pathway in apoE(-/-) mice. |
| Volume: |
95 |
| Issue: |
2 |
| Pages: |
241-50 |
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