Type |
Details |
Score |
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
MGI Sequence Curation Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kawai J |
Year: |
2001 |
Journal: |
Nature |
Title: |
Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
Issue: |
6821 |
Pages: |
685-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
Adams DJ |
Year: |
2024 |
Journal: |
Nature |
Title: |
Genetic determinants of micronucleus formation in vivo. |
Volume: |
627 |
Issue: |
8002 |
Pages: |
130-136 |
|
•
•
•
•
•
|
Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
Title: |
Nomenclature Committee Use |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Cyagen Biosciences Inc. |
Year: |
2022 |
|
Title: |
Cyagen Biosciences Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GOA curators |
Year: |
2016 |
|
Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Watson LM |
Year: |
2017 |
Journal: |
Am J Hum Genet |
Title: |
Dominant Mutations in GRM1 Cause Spinocerebellar Ataxia Type 44. |
Volume: |
101 |
Issue: |
3 |
Pages: |
451-458 |
|
•
•
•
•
•
|
DO Term |
|
•
•
•
•
•
|
Allele |
Name: |
glutamate receptor, metabotropic 1; cervelet 4 |
Allele Type: |
Spontaneous |
|
|
•
•
•
•
•
|
Allele |
Name: |
glutamate receptor, metabotropic 1; endonuclease-mediated mutation 2, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Conditional ready, No functional change |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Grm1/Grm1 |
Background: |
BALB/cPas-Grm1 |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
DO Term |
|
•
•
•
•
•
|
Publication |
First Author: |
Schiffner S |
Year: |
2014 |
Journal: |
Exp Eye Res |
Title: |
Tg(Grm1) transgenic mice: a murine model that mimics spontaneous uveal melanoma in humans? |
Volume: |
127 |
|
Pages: |
59-68 |
|
•
•
•
•
•
|
Publication |
First Author: |
de Jel MM |
Year: |
2019 |
Journal: |
Oncogenesis |
Title: |
Loss of CYLD accelerates melanoma development and progression in the Tg(Grm1) melanoma mouse model. |
Volume: |
8 |
Issue: |
10 |
Pages: |
56 |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion E, Suzie Chen |
Allele Type: |
Transgenic |
Attribute String: |
Inserted expressed sequence |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 7, Atsu Aiba |
Allele Type: |
Transgenic |
Attribute String: |
Inducible, Inserted expressed sequence |
|
•
•
•
•
•
|
Strain |
Attribute String: |
transgenic, mutant strain, coisogenic |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tg(Dct-Grm1)ESzc/? |
Background: |
involves: C57BL/6J |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tg(Dct-Grm1)ESzc/? |
Background: |
C57BL/6J-Tg(Dct-Grm1)ESzc |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Schott M |
Year: |
2022 |
Journal: |
Int J Mol Med |
Title: |
Impact of CYLD on chromatin structure and histone methylation in malignant melanoma. |
Volume: |
49 |
Issue: |
5 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mairhofer DG |
Year: |
2015 |
Journal: |
J Invest Dermatol |
Title: |
Impaired gp100-Specific CD8(+) T-Cell Responses in the Presence of Myeloid-Derived Suppressor Cells in a Spontaneous Mouse Melanoma Model. |
Volume: |
135 |
Issue: |
11 |
Pages: |
2785-2793 |
|
•
•
•
•
•
|
Publication |
First Author: |
Staebler S |
Year: |
2024 |
Journal: |
Cell Death Dis |
Title: |
Transcription factor activating enhancer-binding protein 2ε (AP2ε) modulates phenotypic plasticity and progression of malignant melanoma. |
Volume: |
15 |
Issue: |
5 |
Pages: |
351 |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
RNA-Seq |
Study Type: |
WT vs. Mutant |
Source: |
GEO |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Grm1/Grm1 Pcp2/Pcp2<+> Tg(tetO-Grm1)7Atai/? |
Background: |
involves: 129S2/SvPas * C57BL/6N |
Zygosity: |
cx |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Leembruggen AJL |
Year: |
2023 |
Journal: |
Biomolecules |
Title: |
Group I Metabotropic Glutamate Receptors Modulate Motility and Enteric Neural Activity in the Mouse Colon. |
Volume: |
13 |
Issue: |
1 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Desai MA |
Year: |
1995 |
Journal: |
Mol Pharmacol |
Title: |
Cloning and expression of a human metabotropic glutamate receptor 1 alpha: enhanced coupling on co-transfection with a glutamate transporter. |
Volume: |
48 |
Issue: |
4 |
Pages: |
648-57 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wu H |
Year: |
2014 |
Journal: |
Science |
Title: |
Structure of a class C GPCR metabotropic glutamate receptor 1 bound to an allosteric modulator. |
Volume: |
344 |
Issue: |
6179 |
Pages: |
58-64 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
G protein-coupled receptors (GPCRs) constitute a vast protein family that encompasses a wide range of functions, including various autocrine, paracrine and endocrine processes. They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups []. The term clan can be used to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include rhodopsin-like GPCRs (Class A, GPCRA), secretin-like GPCRs (Class B, GPCRB), metabotropic glutamate receptor family (Class C, GPCRC), fungal mating pheromone receptors (Class D, GPCRD), cAMP receptors (Class E, GPCRE) and frizzled/smoothened (Class F, GPCRF) [, , , , ]. GPCRs are major drug targets, and are consequently the subject of considerable research interest. It has been reported that the repertoire of GPCRs for endogenous ligands consists of approximately 400 receptors in humans and mice []. Most GPCRs are identified on the basis of their DNA sequences, rather than the ligand they bind, those that are unmatched to known natural ligands are designated by as orphan GPCRs, or unclassified GPCRs [].GPCR family 3 receptors (also known as family C) are structurally similar to other GPCRs, but do not show any significant sequence similarity and thus represent a distinct group. Structurally they are composed of four elements; an N-terminal signal sequence; a large hydrophilic extracellular agonist-binding region containing several conserved cysteine residues which could be involved in disulphide bonds; a shorter region containing seven transmembrane domains; and a C-terminal cytoplasmic domain of variable length []. Family 3 members include the metabotropic glutamate receptors, the extracellular calcium-sensing receptors, the gamma-amino-butyric acid (GABA) type B receptors, and the vomeronasal type-2 receptors [, , , ]. As these receptors regulate many important physiological processes they are potentially promising targets for drug development.The metabotropic glutamate receptors are functionally and pharmacologically distinct from the ionotropic glutamate receptors. They are coupled to G-proteins and stimulate the inositol phosphate/Ca2+intracellular signalling pathway [, , , ]. At least eight sub-types of metabotropic receptor (GRM1-8) have been identified in cloning studies. The sub-types differ in their agonist pharmacology and signal transduction pathways.mRNA for GRM1 is widespread in the brain and is abundant in neuronal cells in hippocampaldentate gyrus and CA2-3 regions, cerebellum Purkinje cells, olfactory bulband thalamic nuclei. GRM1 activates the phophoinositide pathway. It is thought to participate in the central action of glutamate in the CNS, such as long-term potentiation in the hippocampus and long-term depression in the cerebellum [, ]. Like GRM5 [], it is a potential therapeutic target for several diseases []. Crystallisation of its seven transmembrane domain shows a similar structure to this seen in the entire GPCR protein family []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Niswender CM |
Year: |
2010 |
Journal: |
Annu Rev Pharmacol Toxicol |
Title: |
Metabotropic glutamate receptors: physiology, pharmacology, and disease. |
Volume: |
50 |
|
Pages: |
295-322 |
|
•
•
•
•
•
|
Publication |
First Author: |
Minakami R |
Year: |
1994 |
Journal: |
Biochem Biophys Res Commun |
Title: |
Molecular cloning and the functional expression of two isoforms of human metabotropic glutamate receptor subtype 5. |
Volume: |
199 |
Issue: |
3 |
Pages: |
1136-43 |
|
•
•
•
•
•
|
Publication |
First Author: |
Doré AS |
Year: |
2014 |
Journal: |
Nature |
Title: |
Structure of class C GPCR metabotropic glutamate receptor 5 transmembrane domain. |
Volume: |
511 |
Issue: |
7511 |
Pages: |
557-62 |
|
•
•
•
•
•
|
Publication |
First Author: |
Nasrallah C |
Year: |
2021 |
Journal: |
Cell Rep |
Title: |
Agonists and allosteric modulators promote signaling from different metabotropic glutamate receptor 5 conformations. |
Volume: |
36 |
Issue: |
9 |
Pages: |
109648 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
G protein-coupled receptors (GPCRs) constitute a vast protein family that encompasses a wide range of functions, including various autocrine, paracrine and endocrine processes. They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups []. The term clan can be used to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include rhodopsin-like GPCRs (Class A, GPCRA), secretin-like GPCRs (Class B, GPCRB), metabotropic glutamate receptor family (Class C, GPCRC), fungal mating pheromone receptors (Class D, GPCRD), cAMP receptors (Class E, GPCRE) and frizzled/smoothened (Class F, GPCRF) [, , , , ]. GPCRs are major drugtargets, and are consequently the subject of considerable research interest. It has been reported that the repertoire of GPCRs for endogenous ligands consists of approximately 400 receptors in humans and mice []. Most GPCRs are identified on the basis of their DNA sequences, rather than the ligand they bind, those that are unmatched to known natural ligands are designated by as orphan GPCRs, or unclassified GPCRs [].GPCR family 3 receptors (also known as family C) are structurally similar to other GPCRs, but do not show any significant sequence similarity and thus represent a distinct group. Structurally they are composed of four elements; an N-terminal signal sequence; a large hydrophilic extracellular agonist-binding region containing several conserved cysteine residues which could be involved in disulphide bonds; a shorter region containing seven transmembrane domains; and a C-terminal cytoplasmic domain of variable length []. Family 3 members include the metabotropic glutamate receptors, the extracellular calcium-sensing receptors, the gamma-amino-butyric acid (GABA) type B receptors, and the vomeronasal type-2 receptors [, , , ]. As these receptors regulate many important physiological processes they are potentially promising targets for drug development.The metabotropic glutamate receptors are functionally and pharmacologically distinct from the ionotropic glutamate receptors. They are coupled to G-proteins and stimulate the inositol phosphate/Ca2+intracellular signalling pathway [, , , ]. At least eight sub-types of metabotropic receptor (GRM1-8) have been identified in cloning studies. The sub-types differ in their agonist pharmacology and signal transduction pathways.mRNA for GRM5 is widespread in the brain, with a unique distribution; it is found in highlevels in the striatum, cerebral cortex, hippocampus and olfactory bulb.GRM5 activates the phosphoinositide pathway. It plays an important role in the regulation of synaptic plasticity and the modulation of the neural network activity []. Like GRM1 [], it is a potential therapeutic target for several diseases []with a similar structure to this seen in the entire GPCR superfamily [, ]. |
|
•
•
•
•
•
|
Publication |
First Author: |
Sharma MD |
Year: |
2021 |
Journal: |
Immunity |
Title: |
Inhibition of the BTK-IDO-mTOR axis promotes differentiation of monocyte-lineage dendritic cells and enhances anti-tumor TÂ cell immunity. |
Volume: |
54 |
Issue: |
10 |
Pages: |
2354-2371.e8 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
324
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Sharma MD |
Year: |
2018 |
Journal: |
Immunity |
Title: |
Activation of p53 in Immature Myeloid Precursor Cells Controls Differentiation into Ly6c+CD103+ Monocytic Antigen-Presenting Cells in Tumors. |
Volume: |
48 |
Issue: |
1 |
Pages: |
91-106.e6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sharma MD |
Year: |
2015 |
Journal: |
Sci Adv |
Title: |
The PTEN pathway in Tregs is a critical driver of the suppressive tumor microenvironment. |
Volume: |
1 |
Issue: |
10 |
Pages: |
e1500845 |
|
•
•
•
•
•
|
Publication |
First Author: |
Abe T |
Year: |
1992 |
Journal: |
J Biol Chem |
Title: |
Molecular characterization of a novel metabotropic glutamate receptor mGluR5 coupled to inositol phosphate/Ca2+ signal transduction. |
Volume: |
267 |
Issue: |
19 |
Pages: |
13361-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Masu M |
Year: |
1991 |
Journal: |
Nature |
Title: |
Sequence and expression of a metabotropic glutamate receptor. |
Volume: |
349 |
Issue: |
6312 |
Pages: |
760-5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Houamed KM |
Year: |
1991 |
Journal: |
Science |
Title: |
Cloning, expression, and gene structure of a G protein-coupled glutamate receptor from rat brain. |
Volume: |
252 |
Issue: |
5010 |
Pages: |
1318-21 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1199
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
742
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Sullivan R |
Year: |
2000 |
Journal: |
J Pharmacol Exp Ther |
Title: |
Coexpression of full-length gamma-aminobutyric acid(B) (GABA(B)) receptors with truncated receptors and metabotropic glutamate receptor 4 supports the GABA(B) heterodimer as the functional receptor. |
Volume: |
293 |
Issue: |
2 |
Pages: |
460-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ryba NJ |
Year: |
1997 |
Journal: |
Neuron |
Title: |
A new multigene family of putative pheromone receptors. |
Volume: |
19 |
Issue: |
2 |
Pages: |
371-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bräuner-Osborne H |
Year: |
2007 |
Journal: |
Curr Drug Targets |
Title: |
Structure, pharmacology and therapeutic prospects of family C G-protein coupled receptors. |
Volume: |
8 |
Issue: |
1 |
Pages: |
169-84 |
|
•
•
•
•
•
|
Publication |
First Author: |
Brown EM |
Year: |
1993 |
Journal: |
Nature |
Title: |
Cloning and characterization of an extracellular Ca(2+)-sensing receptor from bovine parathyroid. |
Volume: |
366 |
Issue: |
6455 |
Pages: |
575-80 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tanabe Y |
Year: |
1992 |
Journal: |
Neuron |
Title: |
A family of metabotropic glutamate receptors. |
Volume: |
8 |
Issue: |
1 |
Pages: |
169-79 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1203
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1171
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
977
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1065
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1203
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Vassilatis DK |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
The G protein-coupled receptor repertoires of human and mouse. |
Volume: |
100 |
Issue: |
8 |
Pages: |
4903-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Attwood TK |
Year: |
1994 |
Journal: |
Protein Eng |
Title: |
Fingerprinting G-protein-coupled receptors. |
Volume: |
7 |
Issue: |
2 |
Pages: |
195-203 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kolakowski LF Jr |
Year: |
1994 |
Journal: |
Receptors Channels |
Title: |
GCRDb: a G-protein-coupled receptor database. |
Volume: |
2 |
Issue: |
1 |
Pages: |
1-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Foord SM |
Year: |
2005 |
Journal: |
Pharmacol Rev |
Title: |
International Union of Pharmacology. XLVI. G protein-coupled receptor list. |
Volume: |
57 |
Issue: |
2 |
Pages: |
279-88 |
|
•
•
•
•
•
|
Publication |
First Author: |
Harmar AJ |
Year: |
2009 |
Journal: |
Nucleic Acids Res |
Title: |
IUPHAR-DB: the IUPHAR database of G protein-coupled receptors and ion channels. |
Volume: |
37 |
Issue: |
Database issue |
Pages: |
D680-5 |
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Publication |
First Author: |
Bjarnadóttir TK |
Year: |
2006 |
Journal: |
Genomics |
Title: |
Comprehensive repertoire and phylogenetic analysis of the G protein-coupled receptors in human and mouse. |
Volume: |
88 |
Issue: |
3 |
Pages: |
263-73 |
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Publication |
First Author: |
Civelli O |
Year: |
2013 |
Journal: |
Annu Rev Pharmacol Toxicol |
Title: |
G protein-coupled receptor deorphanizations. |
Volume: |
53 |
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Pages: |
127-46 |
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