Type |
Details |
Score |
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
177
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Jin QW |
Year: |
2002 |
Journal: |
Mol Cell Biol |
Title: |
The mal2p protein is an essential component of the fission yeast centromere. |
Volume: |
22 |
Issue: |
20 |
Pages: |
7168-83 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cheeseman IM |
Year: |
2008 |
Journal: |
Mol Biol Cell |
Title: |
KNL1 and the CENP-H/I/K complex coordinately direct kinetochore assembly in vertebrates. |
Volume: |
19 |
Issue: |
2 |
Pages: |
587-94 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry represents centromere protein O (CENP-O) and its homologues in yeasts, Mcm21 and Mal2. In humans, centromere protein O (CENP-O) is a component of the CENPA-CAD (nucleosome distal) complex, a complex recruited to centromeres which is involved in assembly of kinetochore proteins, mitotic progression and chromosome segregation []. CENP-O mediates the attachment of the centromere to the mitotic spindle by forming essential interactions between the microtubule-associated outer kinetochore proteins and the centromere-associated inner kinetochore proteins. CENP-O modulates the kinetochore-bound levels of NDC80 complex []. It may be involved in incorporation of newly synthesized CENP-A into centromeres via its interaction with the CENPA-NAC complex [].In Saccharomyces cerevisiae, Mcm21 is a component of the kinetochore sub-complex COMA (Ctf19p, Okp1p, Mcm21p, Ame1p), which links kinetochore subunits with subunits bound to microtubules during kinetochore assembly [, ]. In Schizosaccharomyces pombe, Mal2 is a component of the Sim4 complex, which is required for loading the DASH complex onto the kinetochore via interaction with Dad1 []. It plays a role in the maintenance of core chromatin structure and kinetochore function []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This domain is the C-terminal histone fold domain of CENP-T, which associates with chromatin [, ]. Proteins containing this domain also include Histone H4. CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly associate with CENP-A, but with histone H3 in the centromere region. CENP-T and -W form a hetero-tetramer with CENP-S and -X and bind to a ~100 bp region of nucleosome-free DNA forming a nucleosome-like structure. The DNA-CENP-T-W-S-X complex is likely to be associated with histone H3-containing nucleosomes rather than with CENP-nucleosomes [, , ].Histone H4 is one of the five histones, along with H1/H5, H2A, H2B and H3. Two copies of each of the H2A, H2B, H3, and H4 histones ensemble to form the core of the nucleosome []. The nucleosome forms octameric structure that wraps DNA in a left-handed manner. H3 is a highly conserved protein of 135 amino acid residues [, ]. Histones can undergo several different types of post-translational modifications that affect transcription, DNA repair, DNA replication and chromosomal stability. The sequence of histone H4 has remained almost invariant in more then 2 billion years of evolution [, , ]. |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
515
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Nishino T |
Year: |
2012 |
Journal: |
Cell |
Title: |
CENP-T-W-S-X forms a unique centromeric chromatin structure with a histone-like fold. |
Volume: |
148 |
Issue: |
3 |
Pages: |
487-501 |
|
•
•
•
•
•
|
Publication |
First Author: |
McClelland SE |
Year: |
2007 |
Journal: |
EMBO J |
Title: |
The CENP-A NAC/CAD kinetochore complex controls chromosome congression and spindle bipolarity. |
Volume: |
26 |
Issue: |
24 |
Pages: |
5033-47 |
|
•
•
•
•
•
|
Publication |
First Author: |
Welburn JP |
Year: |
2009 |
Journal: |
Dev Cell |
Title: |
The human kinetochore Ska1 complex facilitates microtubule depolymerization-coupled motility. |
Volume: |
16 |
Issue: |
3 |
Pages: |
374-85 |
|
•
•
•
•
•
|
Publication |
First Author: |
Naiman N |
Year: |
2017 |
Journal: |
Dev Cell |
Title: |
Repression of Interstitial Identity in Nephron Progenitor Cells by Pax2 Establishes the Nephron-Interstitium Boundary during Kidney Development. |
Volume: |
41 |
Issue: |
4 |
Pages: |
349-365.e3 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ulmke PA |
Year: |
2021 |
Journal: |
Stem Cell Reports |
Title: |
Molecular Profiling Reveals Involvement of ESCO2 in Intermediate Progenitor Cell Maintenance in the Developing Mouse Cortex. |
Volume: |
16 |
Issue: |
4 |
Pages: |
968-984 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
331
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Doenecke D |
Year: |
1982 |
Journal: |
Mol Cell Biochem |
Title: |
Acetylation of histones in nucleosomes. |
Volume: |
44 |
Issue: |
2 |
Pages: |
113-28 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ebralidse KK |
Year: |
1988 |
Journal: |
Nature |
Title: |
A highly basic histone H4 domain bound to the sharply bent region of nucleosomal DNA. |
Volume: |
331 |
Issue: |
6154 |
Pages: |
365-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
De Wulf P |
Year: |
2003 |
Journal: |
Genes Dev |
Title: |
Hierarchical assembly of the budding yeast kinetochore from multiple subcomplexes. |
Volume: |
17 |
Issue: |
23 |
Pages: |
2902-21 |
|
•
•
•
•
•
|
Publication |
First Author: |
Machold R |
Year: |
2011 |
Journal: |
Gene Expr Patterns |
Title: |
Genes expressed in Atoh1 neuronal lineages arising from the r1/isthmus rhombic lip. |
Volume: |
11 |
Issue: |
5-6 |
Pages: |
349-59 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
55
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Wells D |
Year: |
1991 |
Journal: |
Nucleic Acids Res |
Title: |
Histone and histone gene compilation and alignment update. |
Volume: |
19 Suppl |
|
Pages: |
2173-88 |
|
•
•
•
•
•
|
Publication |
First Author: |
Combes AN |
Year: |
2009 |
Journal: |
Dev Dyn |
Title: |
Three-dimensional visualization of testis cord morphogenesis, a novel tubulogenic mechanism in development. |
Volume: |
238 |
Issue: |
5 |
Pages: |
1033-41 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
103
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
103
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Thatcher TH |
Year: |
1994 |
Journal: |
Nucleic Acids Res |
Title: |
Phylogenetic analysis of the core histones H2A, H2B, H3, and H4. |
Volume: |
22 |
Issue: |
2 |
Pages: |
174-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bhasin M |
Year: |
2006 |
Journal: |
J Comput Biol |
Title: |
Recognition and classification of histones using support vector machine. |
Volume: |
13 |
Issue: |
1 |
Pages: |
102-12 |
|
•
•
•
•
•
|
Publication |
First Author: |
Okada M |
Year: |
2006 |
Journal: |
Nat Cell Biol |
Title: |
The CENP-H-I complex is required for the efficient incorporation of newly synthesized CENP-A into centromeres. |
Volume: |
8 |
Issue: |
5 |
Pages: |
446-57 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shimogori T |
Year: |
2010 |
Journal: |
Nat Neurosci |
Title: |
A genomic atlas of mouse hypothalamic development. |
Volume: |
13 |
Issue: |
6 |
Pages: |
767-75 |
|
•
•
•
•
•
|
Publication |
First Author: |
Foltz DR |
Year: |
2006 |
Journal: |
Nat Cell Biol |
Title: |
The human CENP-A centromeric nucleosome-associated complex. |
Volume: |
8 |
Issue: |
5 |
Pages: |
458-69 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu X |
Year: |
2005 |
Journal: |
EMBO J |
Title: |
Molecular analysis of kinetochore architecture in fission yeast. |
Volume: |
24 |
Issue: |
16 |
Pages: |
2919-30 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bailey PJ |
Year: |
2006 |
Journal: |
Exp Cell Res |
Title: |
A global genomic transcriptional code associated with CNS-expressed genes. |
Volume: |
312 |
Issue: |
16 |
Pages: |
3108-19 |
|
•
•
•
•
•
|
Publication |
First Author: |
MGI and IMPC |
Year: |
2017 |
Journal: |
MGI Direct Data Submission |
Title: |
MGI Curation of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Blackshaw S |
Year: |
2004 |
Journal: |
PLoS Biol |
Title: |
Genomic analysis of mouse retinal development. |
Volume: |
2 |
Issue: |
9 |
Pages: |
E247 |
|
•
•
•
•
•
|
Publication |
First Author: |
Velocigene |
Year: |
2008 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals) |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Wellcome Trust Sanger Institute |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Ko MS |
Year: |
2000 |
Journal: |
Development |
Title: |
Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. |
Volume: |
127 |
Issue: |
8 |
Pages: |
1737-49 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bedogni F |
Year: |
2021 |
Journal: |
Front Mol Neurosci |
Title: |
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
Volume: |
14 |
|
Pages: |
686034 |
|
•
•
•
•
•
|
Publication |
First Author: |
Helmholtz Zentrum Muenchen GmbH |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Visel A |
Year: |
2004 |
Journal: |
Nucleic Acids Res |
Title: |
GenePaint.org: an atlas of gene expression patterns in the mouse embryo. |
Volume: |
32 |
Issue: |
Database issue |
Pages: |
D552-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Function or Process or Component Unknown following Literature Review |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GUDMAP Consortium |
Year: |
2004 |
Journal: |
www.gudmap.org |
Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
Pages: |
14109-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
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•
•
•
•
•
|
Publication |
First Author: |
Huttlin EL |
Year: |
2010 |
Journal: |
Cell |
Title: |
A tissue-specific atlas of mouse protein phosphorylation and expression. |
Volume: |
143 |
Issue: |
7 |
Pages: |
1174-89 |
|
•
•
•
•
•
|
Publication |
First Author: |
Church DM |
Year: |
2009 |
Journal: |
PLoS Biol |
Title: |
Lineage-specific biology revealed by a finished genome assembly of the mouse. |
Volume: |
7 |
Issue: |
5 |
Pages: |
e1000112 |
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•
•
•
•
|