Type |
Details |
Score |
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-02-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3782028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6505951 |
Age: |
postnatal day 6 |
Image: |
4h |
|
Specimen Label: |
4h |
Detected: |
true |
Specimen Num: |
33 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-02-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3782028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6505951 |
Age: |
postnatal day 10 |
Image: |
4j |
|
Specimen Label: |
4j |
Detected: |
true |
Specimen Num: |
35 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-02-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3782028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6505951 |
Age: |
postnatal day 14 |
Image: |
4k |
|
Specimen Label: |
4k |
Detected: |
true |
Specimen Num: |
36 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-02-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3782028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6505951 |
Age: |
postnatal day 4 |
Image: |
4f |
|
Specimen Label: |
4f |
Detected: |
true |
Specimen Num: |
31 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-02-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3782028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6505951 |
Age: |
postnatal day 7 |
Image: |
4i |
|
Specimen Label: |
4i |
Detected: |
true |
Specimen Num: |
34 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-02-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3782028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6505951 |
Age: |
postnatal adult |
Image: |
4l |
|
Specimen Label: |
4l |
Detected: |
true |
Specimen Num: |
37 |
|
•
•
•
•
•
|
Publication |
First Author: |
Panezai SK |
Year: |
2020 |
Journal: |
J Comp Neurol |
Title: |
Reorganization of longitudinal compartments in the laterally protruding paraflocculus of the postnatal mouse cerebellum. |
Volume: |
528 |
Issue: |
10 |
Pages: |
1725-1741 |
|
•
•
•
•
•
|
Publication |
First Author: |
Nollet F |
Year: |
2000 |
Journal: |
J Mol Biol |
Title: |
Phylogenetic analysis of the cadherin superfamily allows identification of six major subfamilies besides several solitary members. |
Volume: |
299 |
Issue: |
3 |
Pages: |
551-72 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yamamoto M |
Year: |
2005 |
Journal: |
Dev Biol |
Title: |
Retinoic acid influences the development of the inferior olivary nucleus in the rodent. |
Volume: |
280 |
Issue: |
2 |
Pages: |
421-33 |
|
•
•
•
•
•
|
Publication |
First Author: |
National Laboratory Animal Center |
Year: |
2020 |
|
Title: |
National Laboratory Animal Center Website |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Tsai NP |
Year: |
2012 |
Journal: |
Cell |
Title: |
Multiple autism-linked genes mediate synapse elimination via proteasomal degradation of a synaptic scaffold PSD-95. |
Volume: |
151 |
Issue: |
7 |
Pages: |
1581-94 |
|
•
•
•
•
•
|
Publication |
First Author: |
Angelakos CC |
Year: |
2019 |
Journal: |
Neurobiol Learn Mem |
Title: |
Home-cage hypoactivity in mouse genetic models of autism spectrum disorder. |
Volume: |
165 |
|
Pages: |
107000 |
|
•
•
•
•
•
|
Publication |
First Author: |
Vibulyaseck S |
Year: |
2017 |
Journal: |
J Comp Neurol |
Title: |
Spatial rearrangement of Purkinje cell subsets forms the transverse and longitudinal compartmentalization in the mouse embryonic cerebellum. |
Volume: |
525 |
Issue: |
14 |
Pages: |
2971-2990 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tran-Anh K |
Year: |
2020 |
Journal: |
eNeuro |
Title: |
Common Origin of the Cerebellar Dual Somatotopic Areas Revealed by Tracking Embryonic Purkinje Cell Clusters with Birthdate Tagging. |
Volume: |
7 |
Issue: |
6 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Nakao S |
Year: |
2008 |
Journal: |
J Cell Biol |
Title: |
Contact-dependent promotion of cell migration by the OL-protocadherin-Nap1 interaction. |
Volume: |
182 |
Issue: |
2 |
Pages: |
395-410 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gao Y |
Year: |
2021 |
Journal: |
Commun Biol |
Title: |
Loss of histone methyltransferase ASH1L in the developing mouse brain causes autistic-like behaviors. |
Volume: |
4 |
Issue: |
1 |
Pages: |
756 |
|
•
•
•
•
•
|
Publication |
First Author: |
Asahina H |
Year: |
2012 |
Journal: |
Neuroscience |
Title: |
Distribution of protocadherin 9 protein in the developing mouse nervous system. |
Volume: |
225 |
|
Pages: |
88-104 |
|
•
•
•
•
•
|
Publication |
First Author: |
Uemura M |
Year: |
2007 |
Journal: |
Nat Neurosci |
Title: |
OL-Protocadherin is essential for growth of striatal axons and thalamocortical projections. |
Volume: |
10 |
Issue: |
9 |
Pages: |
1151-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Morello F |
Year: |
2015 |
Journal: |
J Neurosci |
Title: |
Frizzled3 Controls Axonal Polarity and Intermediate Target Entry during Striatal Pathway Development. |
Volume: |
35 |
Issue: |
42 |
Pages: |
14205-19 |
|
•
•
•
•
•
|
Publication |
First Author: |
Harrington AJ |
Year: |
2016 |
Journal: |
Elife |
Title: |
MEF2C regulates cortical inhibitory and excitatory synapses and behaviors relevant to neurodevelopmental disorders. |
Volume: |
5 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marfull-Oromà P |
Year: |
2021 |
Journal: |
J Neurochem |
Title: |
Genetic ablation of the Rho GTPase Rnd3 triggers developmental defects in internal capsule and the globus pallidus formation. |
Volume: |
158 |
Issue: |
2 |
Pages: |
197-216 |
|
•
•
•
•
•
|
Publication |
First Author: |
Croci L |
Year: |
2006 |
Journal: |
Development |
Title: |
A key role for the HLH transcription factor EBF2COE2,O/E-3 in Purkinje neuron migration and cerebellar cortical topography. |
Volume: |
133 |
Issue: |
14 |
Pages: |
2719-29 |
|
•
•
•
•
•
|
Publication |
First Author: |
Fossat N |
Year: |
2015 |
Journal: |
Development |
Title: |
Context-specific function of the LIM homeobox 1 transcription factor in head formation of the mouse embryo. |
Volume: |
142 |
Issue: |
11 |
Pages: |
2069-79 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lu KM |
Year: |
2014 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Dual role for Islet-1 in promoting striatonigral and repressing striatopallidal genetic programs to specify striatonigral cell identity. |
Volume: |
111 |
Issue: |
1 |
Pages: |
E168-77 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kuwahara A |
Year: |
2020 |
Journal: |
Elife |
Title: |
Delineating the early transcriptional specification of the mammalian trachea and esophagus. |
Volume: |
9 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Edmond M |
Year: |
2017 |
Journal: |
eNeuro |
Title: |
Topoisomerase IIβ Selectively Regulates Motor Neuron Identity and Peripheral Connectivity through Hox/Pbx-Dependent Transcriptional Programs. |
Volume: |
4 |
Issue: |
6 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Machado CB |
Year: |
2014 |
Journal: |
Development |
Title: |
Reconstruction of phrenic neuron identity in embryonic stem cell-derived motor neurons. |
Volume: |
141 |
Issue: |
4 |
Pages: |
784-94 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kc R |
Year: |
2024 |
Journal: |
Commun Biol |
Title: |
Multimodal Hox5 activity generates motor neuron diversity. |
Volume: |
7 |
Issue: |
1 |
Pages: |
1166 |
|
•
•
•
•
•
|
Publication |
First Author: |
van de Haar LL |
Year: |
2022 |
Journal: |
Cell Rep |
Title: |
Molecular signatures and cellular diversity during mouse habenula development. |
Volume: |
40 |
Issue: |
1 |
Pages: |
111029 |
|
•
•
•
•
•
|
Publication |
First Author: |
Soleilhavoup C |
Year: |
2020 |
Journal: |
Nat Commun |
Title: |
Nolz1 expression is required in dopaminergic axon guidance and striatal innervation. |
Volume: |
11 |
Issue: |
1 |
Pages: |
3111 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bibollet-Bahena O |
Year: |
2017 |
Journal: |
PLoS One |
Title: |
A dual-strategy expression screen for candidate connectivity labels in the developing thalamus. |
Volume: |
12 |
Issue: |
5 |
Pages: |
e0177977 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mayer C |
Year: |
2018 |
Journal: |
Nature |
Title: |
Developmental diversification of cortical inhibitory interneurons. |
Volume: |
555 |
Issue: |
7697 |
Pages: |
457-462 |
|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki N |
Year: |
2003 |
Journal: |
DNA Res |
Title: |
Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. |
Volume: |
10 |
Issue: |
1 |
Pages: |
35-48 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
FANTOM2 Data Curation in Mouse Genome Informatics |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Thompson CL |
Year: |
2014 |
Journal: |
Neuron |
Title: |
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. |
Volume: |
83 |
Issue: |
2 |
Pages: |
309-323 |
|
•
•
•
•
•
|
Publication |
First Author: |
Koscielny G |
Year: |
2014 |
Journal: |
Nucleic Acids Res |
Title: |
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. |
Volume: |
42 |
Issue: |
Database issue |
Pages: |
D802-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bedogni F |
Year: |
2021 |
Journal: |
Front Mol Neurosci |
Title: |
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
Volume: |
14 |
|
Pages: |
686034 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
Year: |
2014 |
Journal: |
Database Release |
Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Magdaleno S |
Year: |
2006 |
Journal: |
PLoS Biol |
Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
Volume: |
4 |
Issue: |
4 |
Pages: |
e86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
MGI Sequence Curation Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kawai J |
Year: |
2001 |
Journal: |
Nature |
Title: |
Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
Issue: |
6821 |
Pages: |
685-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
Adams DJ |
Year: |
2024 |
Journal: |
Nature |
Title: |
Genetic determinants of micronucleus formation in vivo. |
Volume: |
627 |
Issue: |
8002 |
Pages: |
130-136 |
|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Jao TM |
Year: |
2014 |
Journal: |
Int J Cancer |
Title: |
Protocadherin 10 suppresses tumorigenesis and metastasis in colorectal cancer and its genetic loss predicts adverse prognosis. |
Volume: |
135 |
Issue: |
11 |
Pages: |
2593-603 |
|
•
•
•
•
•
|
Publication |
First Author: |
Li Z |
Year: |
2014 |
Journal: |
Mol Med Rep |
Title: |
Nuclear factor-κB is involved in the protocadherin-10-mediated pro-apoptotic effect in multiple myeloma. |
Volume: |
10 |
Issue: |
2 |
Pages: |
832-8 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Protocadherin-10 (Pcdh10) belongs to the delta-2 subfamily of nonclustered protocadherins []. Pcdh10 is a pivotal tumour suppressor in colorectal cancer []and induces myeloma cell apoptosis, probably by inhibiting the NF-kappaB pathway [].The cadherin family consists of a large group of cell adhesion proteins. It can be classified into three subfamilies: classical cadherins, desmosomal cadherins and protocadherins (PCDHs). Based on the genomic structure, the PCDH family can be divided into two groups, clustered PCDHs and non-clustered PCDHs. Non-clustered PCDHs can be further classified into three subgroups: delta1 (PCDH1, PCDH7, PCDH9, PCDH11 and PCDH20), delta2 (PCDH8, PCDH10, PCDH12, PCDH17, PCDH18 and PCDH19) and epsilon (PCDH15, PCDH16, PCDH21 and MUCDHL). Non-clustered PCDHs are expressed predominantly in the nervous system and have spatiotemporally diverse expression patterns []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Gonçalves NP |
Year: |
2016 |
Journal: |
Am J Pathol |
Title: |
Overexpression of Protocadherin-10 in Transthyretin-Related Familial Amyloidotic Polyneuropathy. |
Volume: |
186 |
Issue: |
7 |
Pages: |
1913-24 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
283
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Vanhalst K |
Year: |
2005 |
Journal: |
Cell Mol Life Sci |
Title: |
delta-Protocadherins: a gene family expressed differentially in the mouse brain. |
Volume: |
62 |
Issue: |
11 |
Pages: |
1247-59 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
440
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
683
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Kim SY |
Year: |
2011 |
Journal: |
Cell Adh Migr |
Title: |
Non-clustered protocadherin. |
Volume: |
5 |
Issue: |
2 |
Pages: |
97-105 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1057
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1047
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
896
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1098
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
896
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1040
 |
Fragment?: |
false |
|
•
•
•
•
•
|