Type |
Details |
Score |
Publication |
First Author: |
Poliak S |
Year: |
2015 |
Journal: |
Elife |
Title: |
Synergistic integration of Netrin and ephrin axon guidance signals by spinal motor neurons. |
Volume: |
4 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Shinmyo Y |
Year: |
2015 |
Journal: |
Nat Commun |
Title: |
Draxin from neocortical neurons controls the guidance of thalamocortical projections into the neocortex. |
Volume: |
6 |
|
Pages: |
10232 |
|
•
•
•
•
•
|
Publication |
First Author: |
Brignani S |
Year: |
2020 |
Journal: |
Neuron |
Title: |
Remotely Produced and Axon-Derived Netrin-1 Instructs GABAergic Neuron Migration and Dopaminergic Substantia Nigra Development. |
Volume: |
107 |
Issue: |
4 |
Pages: |
684-702.e9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Luo PM |
Year: |
2023 |
Journal: |
Development |
Title: |
Stromal netrin 1 coordinates renal arteriogenesis and mural cell differentiation. |
Volume: |
150 |
Issue: |
22 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Ji S |
Year: |
2021 |
Journal: |
PLoS One |
Title: |
Distinct expression of select and transcriptome-wide isolated 3'UTRs suggests critical roles in development and transition states. |
Volume: |
16 |
Issue: |
5 |
Pages: |
e0250669 |
|
•
•
•
•
•
|
Publication |
First Author: |
Honeycutt SE |
Year: |
2023 |
Journal: |
Development |
Title: |
Netrin 1 directs vascular patterning and maturity in the developing kidney. |
Volume: |
150 |
Issue: |
22 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Maheshwari U |
Year: |
2020 |
Journal: |
Cell Rep |
Title: |
Postmitotic Hoxa5 Expression Specifies Pontine Neuron Positional Identity and Input Connectivity of Cortical Afferent Subsets. |
Volume: |
31 |
Issue: |
11 |
Pages: |
107767 |
|
•
•
•
•
•
|
Publication |
First Author: |
Meadows SM |
Year: |
2012 |
Journal: |
Circ Res |
Title: |
Integration of repulsive guidance cues generates avascular zones that shape mammalian blood vessels. |
Volume: |
110 |
Issue: |
1 |
Pages: |
34-46 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dasgupta K |
Year: |
2019 |
Journal: |
Dev Biol |
Title: |
Molecular patterning of the embryonic cranial mesenchyme revealed by genome-wide transcriptional profiling. |
Volume: |
455 |
Issue: |
2 |
Pages: |
434-448 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hecht J |
Year: |
2007 |
Journal: |
Gene Expr Patterns |
Title: |
Detection of novel skeletogenesis target genes by comprehensive analysis of a Runx2(-/-) mouse model. |
Volume: |
7 |
Issue: |
1-2 |
Pages: |
102-12 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chen B |
Year: |
2005 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Fezl regulates the differentiation and axon targeting of layer 5 subcortical projection neurons in cerebral cortex. |
Volume: |
102 |
Issue: |
47 |
Pages: |
17184-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory DNA Panel Mapping Resource |
Year: |
1999 |
Journal: |
Database Release |
Title: |
JAX Interspecific Backcross BSS and BSB Public Mapping Data |
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|
•
•
•
•
•
|
Publication |
First Author: |
Brady KP |
Year: |
1997 |
Journal: |
Genome Res |
Title: |
Genetic mapping of 262 loci derived from expressed sequences in a murine interspecific cross using single-strand conformational polymorphism analysis. |
Volume: |
7 |
Issue: |
11 |
Pages: |
1085-93 |
|
•
•
•
•
•
|
Publication |
First Author: |
NIH Mouse Knockout Inventory |
Year: |
2004 |
Journal: |
MGI Direct Data Submission |
Title: |
Information obtained from the NIH Mouse Knockout Inventory |
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|
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|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2001 |
|
Title: |
RIKEN Data Curation in Mouse Genome Informatics |
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Hansen J |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. |
Volume: |
100 |
Issue: |
17 |
Pages: |
9918-22 |
|
•
•
•
•
•
|
Publication |
First Author: |
Thompson CL |
Year: |
2014 |
Journal: |
Neuron |
Title: |
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. |
Volume: |
83 |
Issue: |
2 |
Pages: |
309-323 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bedogni F |
Year: |
2021 |
Journal: |
Front Mol Neurosci |
Title: |
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
Volume: |
14 |
|
Pages: |
686034 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lennon G |
Year: |
1999 |
Journal: |
Database Download |
Title: |
WashU-HHMI Mouse EST Project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Velocigene |
Year: |
2008 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals) |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GUDMAP Consortium |
Year: |
2004 |
Journal: |
www.gudmap.org |
Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
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•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2014 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
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|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
DDB, FB, MGI, GOA, ZFIN curators |
Year: |
2001 |
|
Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Magdaleno S |
Year: |
2006 |
Journal: |
PLoS Biol |
Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
Volume: |
4 |
Issue: |
4 |
Pages: |
e86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
MGI Sequence Curation Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database |
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•
•
•
•
•
|
Publication |
First Author: |
Kawai J |
Year: |
2001 |
Journal: |
Nature |
Title: |
Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
Issue: |
6821 |
Pages: |
685-90 |
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•
•
•
•
•
|
Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
Title: |
Nomenclature Committee Use |
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
Pages: |
14109-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
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•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
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|
•
•
•
•
•
|
Publication |
First Author: |
Cyagen Biosciences Inc. |
Year: |
2022 |
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Title: |
Cyagen Biosciences Website. |
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•
•
•
•
•
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Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
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|
•
•
•
•
•
|
Publication |
First Author: |
GOA curators |
Year: |
2016 |
|
Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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•
•
•
•
•
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Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
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|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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•
•
•
•
•
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Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
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•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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•
•
•
•
•
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Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
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|
•
•
•
•
•
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Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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•
•
•
•
•
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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•
•
•
•
•
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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|
•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
945
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Yang X |
Year: |
2018 |
Journal: |
Biochem Biophys Res Commun |
Title: |
The role of UNC5b in ox-LDL inhibiting migration of RAW264.7 macrophages and the involvement of CCR7. |
Volume: |
505 |
Issue: |
3 |
Pages: |
637-643 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
934
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Ramkhelawon B |
Year: |
2013 |
Journal: |
Arterioscler Thromb Vasc Biol |
Title: |
Hypoxia induces netrin-1 and Unc5b in atherosclerotic plaques: mechanism for macrophage retention and survival. |
Volume: |
33 |
Issue: |
6 |
Pages: |
1180-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Karaulanov E |
Year: |
2009 |
Journal: |
PLoS One |
Title: |
Unc5B interacts with FLRT3 and Rnd1 to modulate cell adhesion in Xenopus embryos. |
Volume: |
4 |
Issue: |
5 |
Pages: |
e5742 |
|
•
•
•
•
•
|
Publication |
First Author: |
Handa N |
Year: |
2006 |
Journal: |
Acta Crystallogr D Biol Crystallogr |
Title: |
Structure of the UNC5H2 death domain. |
Volume: |
62 |
Issue: |
Pt 12 |
Pages: |
1502-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang W |
Year: |
2009 |
Journal: |
Am J Physiol Renal Physiol |
Title: |
Netrin-1 increases proliferation and migration of renal proximal tubular epithelial cells via the UNC5B receptor. |
Volume: |
296 |
Issue: |
4 |
Pages: |
F723-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang R |
Year: |
2009 |
Journal: |
Mol Cell |
Title: |
Autoinhibition of UNC5b revealed by the cytoplasmic domain structure of the receptor. |
Volume: |
33 |
Issue: |
6 |
Pages: |
692-703 |
|
•
•
•
•
•
|
Allele |
Name: |
unc-5 netrin receptor B; targeted mutation 1.1, Z Josh Huang |
Allele Type: |
Targeted |
Attribute String: |
Inducible, Recombinase |
|
•
•
•
•
•
|
Strain |
Attribute String: |
mutant stock, targeted mutation |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Unc5b/Unc5b<+> |
Background: |
involves: 129S4/SvJae * C57BL/6 |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
O'Sullivan ML |
Year: |
2012 |
Journal: |
Neuron |
Title: |
FLRT proteins are endogenous latrophilin ligands and regulate excitatory synapse development. |
Volume: |
73 |
Issue: |
5 |
Pages: |
903-10 |
|
•
•
•
•
•
|
Publication |
First Author: |
Maruyama K |
Year: |
2016 |
Journal: |
J Biol Chem |
Title: |
Bone-protective Functions of Netrin 1 Protein. |
Volume: |
291 |
Issue: |
46 |
Pages: |
23854-23868 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang F |
Year: |
2016 |
Journal: |
Nat Commun |
Title: |
The Robo4 cytoplasmic domain is dispensable for vascular permeability and neovascularization. |
Volume: |
7 |
|
Pages: |
13517 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents the death domain (DD) found in Uncoordinated-5B (UNC5B), which is a receptor for the secreted netrin-1 and plays a role in axonal guidance, angiogenesis, and apoptosis. UNC5B signaling is involved in the netrin-1-induced proliferation and migration of renal proximal tubular cells []. It is also required for vascular patterning during embryonic development, and its activation inhibits sprouting angiogenesis [, ]. It belongs to the UNC-5 family.UNC5 proteins are transmembrane proteins with an extracellular domain consisting of two immunoglobulin repeats, two thrombospondin type-I modules and an intracellular region containing a ZU-5 domain, UPA domain and a DD [, , ].DDs (Death domains) are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes [, ]. |
|
•
•
•
•
•
|
Publication |
First Author: |
Larrieu-Lahargue F |
Year: |
2010 |
Journal: |
Blood |
Title: |
Netrin-4 induces lymphangiogenesis in vivo. |
Volume: |
115 |
Issue: |
26 |
Pages: |
5418-26 |
|
•
•
•
•
•
|
Publication |
First Author: |
Larrieu-Lahargue F |
Year: |
2011 |
Journal: |
Circ Res |
Title: |
Netrin-4 activates endothelial integrin {alpha}6{beta}1. |
Volume: |
109 |
Issue: |
7 |
Pages: |
770-4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tu T |
Year: |
2015 |
Journal: |
Cell Res |
Title: |
CD146 acts as a novel receptor for netrin-1 in promoting angiogenesis and vascular development. |
Volume: |
25 |
Issue: |
3 |
Pages: |
275-87 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tong J |
Year: |
2001 |
Journal: |
J Biol Chem |
Title: |
Netrin stimulates tyrosine phosphorylation of the UNC-5 family of netrin receptors and induces Shp2 binding to the RCM cytodomain. |
Volume: |
276 |
Issue: |
44 |
Pages: |
40917-25 |
|
•
•
•
•
•
|
Publication |
First Author: |
Rajasekharan S |
Year: |
2009 |
Journal: |
Genome Biol |
Title: |
The netrin protein family. |
Volume: |
10 |
Issue: |
9 |
Pages: |
239 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
901
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
945
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Feinstein E |
Year: |
1995 |
Journal: |
Trends Biochem Sci |
Title: |
The death domain: a module shared by proteins with diverse cellular functions. |
Volume: |
20 |
Issue: |
9 |
Pages: |
342-4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Park HH |
Year: |
2007 |
Journal: |
Annu Rev Immunol |
Title: |
The death domain superfamily in intracellular signaling of apoptosis and inflammation. |
Volume: |
25 |
|
Pages: |
561-86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Huttlin EL |
Year: |
2010 |
Journal: |
Cell |
Title: |
A tissue-specific atlas of mouse protein phosphorylation and expression. |
Volume: |
143 |
Issue: |
7 |
Pages: |
1174-89 |
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