Type |
Details |
Score |
Allele |
Name: |
transgene insertion 2, Heikki Rauvala |
Allele Type: |
Transgenic |
Attribute String: |
Inserted expressed sequence |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
|
•
•
•
•
•
|
Strain |
Attribute String: |
mutant stock, transgenic |
|
•
•
•
•
•
|
Allele |
Name: |
pleiotrophin; targeted mutation 1, Z Josh Huang |
Allele Type: |
Targeted |
Attribute String: |
Inducible, Recombinase |
|
•
•
•
•
•
|
Strain |
Attribute String: |
transgenic, mutant stock |
|
•
•
•
•
•
|
Strain |
Attribute String: |
mutant stock, transgenic |
|
•
•
•
•
•
|
Publication |
First Author: |
Albi E |
Year: |
2012 |
Journal: |
PLoS One |
Title: |
Loss of parafollicular cells during gravitational changes (microgravity, hypergravity) and the secret effect of pleiotrophin. |
Volume: |
7 |
Issue: |
12 |
Pages: |
e48518 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hashimoto-Gotoh T |
Year: |
2004 |
Journal: |
J Bone Miner Metab |
Title: |
Bone mass increase specific to the female in a line of transgenic mice overexpressing human osteoblast stimulating factor-1. |
Volume: |
22 |
Issue: |
3 |
Pages: |
278-82 |
|
•
•
•
•
•
|
Publication |
First Author: |
Masini MA |
Year: |
2012 |
Journal: |
PLoS One |
Title: |
The impact of long-term exposure to space environment on adult mammalian organisms: a study on mouse thyroid and testis. |
Volume: |
7 |
Issue: |
4 |
Pages: |
e35418 |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tg(BGLAP-PTN)1Thg/Tg(BGLAP-PTN)1Thg |
Background: |
involves: C57BL/6 * DBA/1 |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tg(BGLAP-PTN)1Thg/? |
Background: |
involves: C57BL/6 * DBA/1 |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
2312
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion HJ32, GENSAT Project at Rockefeller University |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Strain |
Attribute String: |
mutant stock, transgenic |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
transcription profiling by array |
Study Type: |
Baseline |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Publication |
First Author: |
Matsumoto K |
Year: |
1994 |
Journal: |
Neurosci Lett |
Title: |
Localization of pleiotrophin and midkine in the postnatal developing cerebellum. |
Volume: |
178 |
Issue: |
2 |
Pages: |
216-20 |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> Ptn/Ptn<+> |
Background: |
involves: 129S6/SvEvTac * C57BL/6NCrl |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Nikolakopoulou AM |
Year: |
2019 |
Journal: |
Nat Neurosci |
Title: |
Pericyte loss leads to circulatory failure and pleiotrophin depletion causing neuron loss. |
Volume: |
22 |
Issue: |
7 |
Pages: |
1089-1098 |
|
•
•
•
•
•
|
Publication |
First Author: |
Takeo M |
Year: |
2023 |
Journal: |
Nat Commun |
Title: |
Cyclical dermal micro-niche switching governs the morphological infradian rhythm of mouse zigzag hair. |
Volume: |
14 |
Issue: |
1 |
Pages: |
4478 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hornum L |
Year: |
2004 |
Journal: |
Mamm Genome |
Title: |
Comparative mapping of rat Iddm4 to segments on HSA7 and MMU6. |
Volume: |
15 |
Issue: |
1 |
Pages: |
53-61 |
|
•
•
•
•
•
|
Publication |
First Author: |
Fan JB |
Year: |
2014 |
Journal: |
Biochem Biophys Res Commun |
Title: |
EGFR trans-activation mediates pleiotrophin-induced activation of Akt and Erk in cultured osteoblasts. |
Volume: |
447 |
Issue: |
3 |
Pages: |
425-30 |
|
•
•
•
•
•
|
Publication |
First Author: |
Motegi A |
Year: |
2004 |
Journal: |
J Cell Sci |
Title: |
ALK receptor tyrosine kinase promotes cell growth and neurite outgrowth. |
Volume: |
117 |
Issue: |
Pt 15 |
Pages: |
3319-29 |
|
•
•
•
•
•
|
Publication |
First Author: |
Souttou B |
Year: |
2001 |
Journal: |
J Biol Chem |
Title: |
Activation of anaplastic lymphoma kinase receptor tyrosine kinase induces neuronal differentiation through the mitogen-activated protein kinase pathway. |
Volume: |
276 |
Issue: |
12 |
Pages: |
9526-31 |
|
•
•
•
•
•
|
Publication |
First Author: |
Degoutin J |
Year: |
2007 |
Journal: |
FEBS Lett |
Title: |
ALK activation induces Shc and FRS2 recruitment: Signaling and phenotypic outcomes in PC12 cells differentiation. |
Volume: |
581 |
Issue: |
4 |
Pages: |
727-34 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bowden ET |
Year: |
2002 |
Journal: |
J Biol Chem |
Title: |
Anti-apoptotic signaling of pleiotrophin through its receptor, anaplastic lymphoma kinase. |
Volume: |
277 |
Issue: |
39 |
Pages: |
35862-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Stoica GE |
Year: |
2001 |
Journal: |
J Biol Chem |
Title: |
Identification of anaplastic lymphoma kinase as a receptor for the growth factor pleiotrophin. |
Volume: |
276 |
Issue: |
20 |
Pages: |
16772-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Stoica GE |
Year: |
2002 |
Journal: |
J Biol Chem |
Title: |
Midkine binds to anaplastic lymphoma kinase (ALK) and acts as a growth factor for different cell types. |
Volume: |
277 |
Issue: |
39 |
Pages: |
35990-8 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
ALK tyrosine kinase receptor (also known as anaplastic lymphoma kinase, ALK) is a neuronal orphan receptor tyrosine kinase that is essentially and transiently expressed in specific regions of the central and peripheral nervous systems and plays an important role in the genesis and differentiation of the nervous system [].ALK transduces signals from ligands at the cell surface, through specific activation of the mitogen-activated protein kinase (MAPK) pathway. Following activation by ligand, ALK induces tyrosine phosphorylation of CBL, FRS2, IRS1 and SHC1, as well as of the MAP kinases MAPK1/ERK2 and MAPK3/ERK1 [, , ]. ALK acts as a receptor for ligands pleiotrophin (PTN), a secreted growth factor, and midkine (MDK), a PTN-related factor, thus participating in PTN and MDK signal transduction. PTN-binding induces MAPK pathway activation, which is important for the anti-apoptotic signaling of PTN and regulation of cell proliferation [, ]. MDK-binding induces phosphorylation of the ALK target insulin receptor substrate (IRS1), activates mitogen-activated protein kinases (MAPKs) and PI3-kinase, resulting also in cell proliferation induction []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Neunaber C |
Year: |
2010 |
Journal: |
J Bone Miner Res |
Title: |
Increased trabecular bone formation in mice lacking the growth factor midkine. |
Volume: |
25 |
Issue: |
8 |
Pages: |
1724-35 |
|
•
•
•
•
•
|
Publication |
First Author: |
Xi G |
Year: |
2020 |
Journal: |
Endocrinology |
Title: |
Estrogen Stimulation of Pleiotrophin Enhances Osteoblast Differentiation and Maintains Bone Mass in IGFBP-2 Null Mice. |
Volume: |
161 |
Issue: |
4 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Kastana P |
Year: |
2023 |
Journal: |
Int J Cancer |
Title: |
Genetic deletion or tyrosine phosphatase inhibition of PTPRZ1 activates c-Met to up-regulate angiogenesis and lung adenocarcinoma growth. |
Volume: |
153 |
Issue: |
5 |
Pages: |
1051-1066 |
|
•
•
•
•
•
|
Publication |
First Author: |
Fujikawa A |
Year: |
2019 |
Journal: |
J Biol Chem |
Title: |
A head-to-toe dimerization has physiological relevance for ligand-induced inactivation of protein tyrosine receptor type Z. |
Volume: |
294 |
Issue: |
41 |
Pages: |
14953-14965 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu Z |
Year: |
2022 |
Journal: |
J Clin Invest |
Title: |
Sec13 promotes oligodendrocyte differentiation and myelin repair through autocrine pleiotrophin signaling. |
Volume: |
132 |
Issue: |
7 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Chang Y |
Year: |
2007 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Secretion of pleiotrophin stimulates breast cancer progression through remodeling of the tumor microenvironment. |
Volume: |
104 |
Issue: |
26 |
Pages: |
10888-93 |
|
•
•
•
•
•
|
Publication |
First Author: |
Marino S |
Year: |
2017 |
Journal: |
Cancer Lett |
Title: |
Pharmacological evidence for the bone-autonomous contribution of the NFκB/β-catenin axis to breast cancer related osteolysis. |
Volume: |
410 |
|
Pages: |
180-190 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wan DC |
Year: |
2006 |
Journal: |
Plast Reconstr Surg |
Title: |
Differential gene expression between juvenile and adult dura mater: a window into what genes play a role in the regeneration of membranous bone. |
Volume: |
118 |
Issue: |
4 |
Pages: |
851-61 |
|
•
•
•
•
•
|
Publication |
First Author: |
Deepa SS |
Year: |
2004 |
Journal: |
J Biol Chem |
Title: |
Chondroitin sulfate chains on syndecan-1 and syndecan-4 from normal murine mammary gland epithelial cells are structurally and functionally distinct and cooperate with heparan sulfate chains to bind growth factors. A novel function to control binding of midkine, pleiotrophin, and basic fibroblast growth factor. |
Volume: |
279 |
Issue: |
36 |
Pages: |
37368-76 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mäkitie AA |
Year: |
2005 |
Journal: |
Lab Invest |
Title: |
Molecular characterization of salivary gland malignancy using the Smgb-Tag transgenic mouse model. |
Volume: |
85 |
Issue: |
8 |
Pages: |
947-61 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kuboyama K |
Year: |
2015 |
Journal: |
J Neurosci |
Title: |
Inactivation of Protein Tyrosine Phosphatase Receptor Type Z by Pleiotrophin Promotes Remyelination through Activation of Differentiation of Oligodendrocyte Precursor Cells. |
Volume: |
35 |
Issue: |
35 |
Pages: |
12162-71 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
688
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
679
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
650
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
718
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
699
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
661
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
729
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
34
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
95
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
129
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
97
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Rothhammer T |
Year: |
2004 |
Journal: |
Cell Mol Life Sci |
Title: |
The Ets-1 transcription factor is involved in the development and invasion of malignant melanoma. |
Volume: |
61 |
Issue: |
1 |
Pages: |
118-28 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wlodarska I |
Year: |
1996 |
Journal: |
Leuk Lymphoma |
Title: |
ETV6 gene rearrangements in hematopoietic malignant disorders. |
Volume: |
23 |
Issue: |
3-4 |
Pages: |
287-95 |
|
•
•
•
•
•
|
Publication |
First Author: |
Coonan JR |
Year: |
2003 |
Journal: |
J Comp Neurol |
Title: |
Role of EphA4 in defining the position of a motoneuron pool within the spinal cord. |
Volume: |
458 |
Issue: |
1 |
Pages: |
98-111 |
|
•
•
•
•
•
|
Publication |
First Author: |
Irie F |
Year: |
2002 |
Journal: |
Nat Neurosci |
Title: |
EphB receptors regulate dendritic spine development via intersectin, Cdc42 and N-WASP. |
Volume: |
5 |
Issue: |
11 |
Pages: |
1117-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Melino G |
Year: |
2003 |
Journal: |
Trends Biochem Sci |
Title: |
Functional regulation of p73 and p63: development and cancer. |
Volume: |
28 |
Issue: |
12 |
Pages: |
663-70 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bloyer S |
Year: |
2003 |
Journal: |
Dev Biol |
Title: |
Identification and characterization of polyhomeotic PREs and TREs. |
Volume: |
261 |
Issue: |
2 |
Pages: |
426-42 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Homologous_superfamily |
Description: |
Sterile alpha motif (SAM) domains are known to be involved in diverse protein-protein interactions, associating with both SAM-containing and non-SAM-containing proteins pathway []. SAM domains exhibit a conserved structure, consisting of a 4-5-helical bundle of two orthogonally packed alpha-hairpins. However SAM domains display a diversity of function, being involved in interactions with proteins, DNA and RNA []. The name sterile alpha motif arose from its presence in proteins that are essential for yeast sexual differentiation. The SAM domain has had various names, including SPM, PTN (pointed), SEP (yeast sterility, Ets-related, PcG proteins), NCR (N-terminal conserved region) and HLH (helix-loop-helix) domain, all of which are related and can be classified as SAM domains.SAM domains occur in eukaryotic and in some bacterial proteins. Structures have been determined for several proteins that contain SAM domains, including Ets-1 transcription factor, which plays a role in the development and invasion of tumour cells by regulating the expression of matrix-degrading proteases []; Etv6 transcription factor, gene rearrangements of which have been demonstrated in several malignancies []; EphA4 receptor tyrosine kinase, which is believed to be important for the correct localization of a motoneuron pool to a specific position in the spinal cord []; EphB2 receptor, which is involved in spine morphogenesis via intersectin, Cdc42 and N-Wasp []; p73, a p53 homologue involved in neuronal development []; and polyhomeotic, which is a member of the Polycomb group of genes (Pc-G) required for the maintenance of the spatial expression pattern of homeotic genes []. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
413
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
80
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
190
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
80
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
413
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
391
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
397
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
205
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
880
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
876
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
158
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
80
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
217
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
282
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
66
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Aviv T |
Year: |
2003 |
Journal: |
Nat Struct Biol |
Title: |
The RNA-binding SAM domain of Smaug defines a new family of post-transcriptional regulators. |
Volume: |
10 |
Issue: |
8 |
Pages: |
614-21 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
525
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
417
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
620
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
519
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
658
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
419
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
445
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1561
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
520
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
478
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
202
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
542
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
161
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
102
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
173
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
998
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
502
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
479
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
408
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
540
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
415
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
342
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
551
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
514
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
461
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
478
 |
Fragment?: |
false |
|
•
•
•
•
•
|