| Type |
Details |
Score |
| Publication |
| First Author: |
Seo W |
| Year: |
2026 |
| Journal: |
Biochem Biophys Res Commun |
| Title: |
Satb1 enforces CD4(+) effector T cell lineage stability by repressing Foxp3 via DNA methylation. |
| Volume: |
827 |
|
| Pages: |
154026 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kiladjian JJ |
| Year: |
2016 |
| Journal: |
Leukemia |
| Title: |
Interferon-alpha for the therapy of myeloproliferative neoplasms: targeting the malignant clone. |
| Volume: |
30 |
| Issue: |
4 |
| Pages: |
776-81 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhang P |
| Year: |
2017 |
| Journal: |
Nucleic Acids Res |
| Title: |
Methyl-CpG binding domain protein 1 regulates localization and activity of Tet1 in a CXXC3 domain-dependent manner. |
| Volume: |
45 |
| Issue: |
12 |
| Pages: |
7118-7136 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ng SY |
| Year: |
2018 |
| Journal: |
Blood |
| Title: |
RhoA G17V is sufficient to induce autoimmunity and promotes T-cell lymphomagenesis in mice. |
| Volume: |
132 |
| Issue: |
9 |
| Pages: |
935-947 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Li S |
| Year: |
2020 |
| Journal: |
Cancer Discov |
| Title: |
Somatic Mutations Drive Specific, but Reversible, Epigenetic Heterogeneity States in AML. |
| Volume: |
10 |
| Issue: |
12 |
| Pages: |
1934-1949 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lu Y |
| Year: |
2021 |
| Journal: |
Cell Discov |
| Title: |
Spatial transcriptome profiling by MERFISH reveals fetal liver hematopoietic stem cell niche architecture. |
| Volume: |
7 |
| Issue: |
1 |
| Pages: |
47 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gioulbasani M |
| Year: |
2024 |
| Journal: |
bioRxiv |
| Title: |
TET proteins regulate Drosha expression and impact microRNAs in iNKT cells. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Cho YS |
| Year: |
2006 |
| Journal: |
J Biol Chem |
| Title: |
Additional sex comb-like 1 (ASXL1), in cooperation with SRC-1, acts as a ligand-dependent coactivator for retinoic acid receptor. |
| Volume: |
281 |
| Issue: |
26 |
| Pages: |
17588-98 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
104
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
173
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
This domain, known as the HARE-HTH domain, adopts the winged helix-turn-helix fold and is predicted to bind DNA. It can be found at the N terminus of the ASXL protein. It can also be found in several other eukaryotic chromatin proteins (such as HB1 in plants), diverse restriction endonucleases and DNA glycosylases, the RNA polymerase delta subunit of Gram-positive bacteria and certain bacterial proteins that combine features of the RNA polymerase alpha-subunit and sigma factors []. The genetic interaction of the HARE-HTH containing ASXL with the methyl cytosine hydroxylating Tet2 protein is suggestive of a role for the domain in discriminating sequences with DNA modifications such as hmC []. Bacterial versions include fusions to diverse restriction endonucleases, and a DNA glycosylase where it may play a similar role in detecting modified DNA. Certain bacterial version of the HARE-HTH domain show fusions to the helix-hairpin-helix domain of the RNA polymerase alpha subunit and the HTH domains found in regions 3 and 4 of the sigma factors []. These versions are predicted to function as a novel inhibitor of the binding of RNA polymerase to transcription start sites, similar to the Bacillus delta protein [, ].This domain consists of four ��-helices (helices I-II-III-IV) and an antiparallel ��-sheet composed of three short ��-strands at the top of a "twisted tripod"formed by helices II, III, and IV [].The Asx-like (Asxl) proteins includes Asxl1-3. They are putative Polycomb group (PcG) proteins, which act by forming multiprotein complexes that are required to maintain the transcriptionally repressive state of homeotic genes throughout development. Asxl1 is involved in transcriptional regulation mediated by ligand-bound retinoic acid receptors (RARs) and peroxisome proliferator-activated receptor gamma (PPARG) [].The delta protein is a dispensable subunit of Bacillus subtilis RNA polymerase (RNAP) that has major effects on the biochemical properties of the purified enzyme. In the presence of delta, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling []. The delta protein, contains two distinct regions, an N-terminal domain and a glutamate and aspartate residue-rich C-terminal region []. It participates in both the initiation and recycling phases of transcription. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ding Y |
| Year: |
2026 |
| Journal: |
Theranostics |
| Title: |
Targeting CPS1 attenuates lung cancer metastasis by regulating EMT through an epigenetic mechanism. |
| Volume: |
16 |
| Issue: |
4 |
| Pages: |
1740-1761 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Feng J |
| Year: |
2023 |
| Journal: |
PLoS Pathog |
| Title: |
NSUN2-mediated m5C modification of HBV RNA positively regulates HBV replication. |
| Volume: |
19 |
| Issue: |
12 |
| Pages: |
e1011808 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Inaba T |
| Year: |
2018 |
| Journal: |
Blood |
| Title: |
The enigma of monosomy 7. |
| Volume: |
131 |
| Issue: |
26 |
| Pages: |
2891-2898 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ono R |
| Year: |
2021 |
| Journal: |
PLoS One |
| Title: |
Tet1 is not required for myeloid leukemogenesis by MLL-ENL in novel mouse models. |
| Volume: |
16 |
| Issue: |
3 |
| Pages: |
e0248425 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
L?pez de Saro FJ |
| Year: |
1999 |
| Journal: |
J Biol Chem |
| Title: |
Expression, abundance, and RNA polymerase binding properties of the delta factor of Bacillus subtilis. |
| Volume: |
274 |
| Issue: |
22 |
| Pages: |
15953-8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
L?pez de Saro FJ |
| Year: |
1995 |
| Journal: |
J Mol Biol |
| Title: |
Structural analysis of the Bacillus subtilis delta factor: a protein polyanion which displaces RNA from RNA polymerase. |
| Volume: |
252 |
| Issue: |
2 |
| Pages: |
189-202 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mot?ckov? V |
| Year: |
2010 |
| Journal: |
Proteins |
| Title: |
Solution structure of the N-terminal domain of Bacillus subtilis delta subunit of RNA polymerase and its classification based on structural homologs. |
| Volume: |
78 |
| Issue: |
7 |
| Pages: |
1807-10 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Malloy MA |
| Year: |
2019 |
| Journal: |
Front Genet |
| Title: |
Perinatal Bisphenol A Exposure and Reprogramming of Imprinted Gene Expression in the Adult Mouse Brain. |
| Volume: |
10 |
|
| Pages: |
951 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhang H |
| Year: |
2023 |
| Journal: |
Burns Trauma |
| Title: |
p53 promotes the expansion of regulatory T cells via DNMT3a- and TET2- mediated Foxp3 expression in sepsis. |
| Volume: |
11 |
|
| Pages: |
tkad021 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Chakraborty R |
| Year: |
2022 |
| Journal: |
Circulation |
| Title: |
Histone Acetyltransferases p300 and CBP Coordinate Distinct Chromatin Remodeling Programs in Vascular Smooth Muscle Plasticity. |
| Volume: |
145 |
| Issue: |
23 |
| Pages: |
1720-1737 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
1514
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
1370
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
2259
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
1513
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
2260
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
1418
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
1370
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
1370
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
1514
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
495
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
597
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
403
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Aravind L |
| Year: |
2012 |
| Journal: |
Cell Cycle |
| Title: |
The HARE-HTH and associated domains: novel modules in the coordination of epigenetic DNA and protein modifications. |
| Volume: |
11 |
| Issue: |
1 |
| Pages: |
119-31 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gerhard DS |
| Year: |
2004 |
| Journal: |
Genome Res |
| Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
| Volume: |
14 |
| Issue: |
10B |
| Pages: |
2121-7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Huttlin EL |
| Year: |
2010 |
| Journal: |
Cell |
| Title: |
A tissue-specific atlas of mouse protein phosphorylation and expression. |
| Volume: |
143 |
| Issue: |
7 |
| Pages: |
1174-89 |
|
•
•
•
•
•
|