|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 701 to 800 out of 962 for Xist

0.032s

Categories

Hits by Category

Hits by Strain

Type Details Score
ncRNA Gene
Type: ncRNA_gene
Organism: mouse, laboratory
ncRNA Gene
Type: ncRNA_gene
Organism: mouse, laboratory
ncRNA Gene
Type: ncRNA_gene
Organism: mouse, laboratory
ncRNA Gene
Type: ncRNA_gene
Organism: mouse, laboratory
lncRNA Gene
Type: lncRNA_gene
Organism: mouse, laboratory
ncRNA Gene
Type: ncRNA_gene
Organism: mouse, laboratory
ncRNA Gene
Type: ncRNA_gene
Organism: mouse, laboratory
ncRNA Gene
Type: ncRNA_gene
Organism: mouse, laboratory
ncRNA Gene
Type: ncRNA_gene
Organism: mouse, laboratory
ncRNA Gene
Type: ncRNA_gene
Organism: mouse, laboratory
ncRNA Gene
Type: ncRNA_gene
Organism: mouse, laboratory
ncRNA Gene
Type: ncRNA_gene
Organism: mouse, laboratory
ncRNA Gene
Type: ncRNA_gene
Organism: mouse, laboratory
ncRNA Gene
Type: ncRNA_gene
Organism: mouse, laboratory
ncRNA Gene
Type: ncRNA_gene
Organism: mouse, laboratory
ncRNA Gene
Type: ncRNA_gene
Organism: Mus pahari
ncRNA Gene
Type: ncRNA_gene
Organism: Mus spretus
GXD Expression    
Probe: MGI:6160395
Assay Type: RT-PCR
Annotation Date: 2018-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:360433
Stage: TS03
Assay Id: MGI:6160396
Age: embryonic day 2.0
Image: S1
Specimen Label: 4-cell
Detected: false
Specimen Num: 1
GXD Expression    
Probe: MGI:6160395
Assay Type: RT-PCR
Annotation Date: 2018-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:360453
Stage: TS03
Assay Id: MGI:6160396
Age: embryonic day 2.5
Image: S1
Specimen Label: 8-16-cell
Detected: false
Specimen Num: 2
GXD Expression    
Probe: MGI:6160395
Assay Type: RT-PCR
Annotation Date: 2018-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:360454
Stage: TS04
Assay Id: MGI:6160396
Age: embryonic day 3.0
Image: S1
Specimen Label: morula
Detected: false
Specimen Num: 3
GXD Expression    
Probe: MGI:6160395
Assay Type: RT-PCR
Annotation Date: 2018-06-12
Strength: Absent
Sex: Male
Emaps: EMAPS:360464
Stage: TS04
Assay Id: MGI:6160396
Age: embryonic day 3.5
Image: S1
Specimen Label: blastocyst
Detected: false
Specimen Num: 4
GXD Expression    
Probe: MGI:6160395
Assay Type: RT-PCR
Annotation Date: 2018-06-12
Strength: Present
Sex: Female
Emaps: EMAPS:360464
Stage: TS04
Assay Id: MGI:6160396
Age: embryonic day 3.5
Image: S1
Specimen Label: blastocyst
Detected: true
Specimen Num: 5
GXD Expression    
Probe: MGI:6160391
Assay Type: RT-PCR
Annotation Date: 2018-06-12
Strength: Present
Sex: Female
Emaps: EMAPS:360464
Stage: TS04
Assay Id: MGI:6160451
Age: embryonic day 3.5
Image: 2
Specimen Label: +m/+p
Detected: true
Specimen Num: 1
GXD Expression    
Probe: MGI:6160391
Assay Type: RT-PCR
Annotation Date: 2018-06-12
Strength: Absent
Sex: Male
Emaps: EMAPS:360464
Stage: TS04
Assay Id: MGI:6160451
Age: embryonic day 3.5
Image: 2
Specimen Label: +m/Y
Detected: false
Specimen Num: 2
GXD Expression    
Probe: MGI:6160392
Assay Type: RT-PCR
Annotation Date: 2018-06-12
Strength: Present
Sex: Female
Emaps: EMAPS:360464
Stage: TS04
Assay Id: MGI:6160454
Age: embryonic day 3.5
Image: 2
Specimen Label: +m/+p
Detected: true
Specimen Num: 1
GXD Expression    
Probe: MGI:6160392
Assay Type: RT-PCR
Annotation Date: 2018-06-12
Strength: Absent
Sex: Male
Emaps: EMAPS:360464
Stage: TS04
Assay Id: MGI:6160454
Age: embryonic day 3.5
Image: 2
Specimen Label: +m/Y
Detected: false
Specimen Num: 2
GXD Expression    
Probe: MGI:6160391
Assay Type: RT-PCR
Annotation Date: 2018-06-12
Strength: Absent
Sex: Female
Emaps: EMAPS:360464
Stage: TS04
Assay Id: MGI:6160451
Age: embryonic day 3.5
Image: 2
Specimen Label: +m/-p
Detected: false
Specimen Num: 3
GXD Expression    
Probe: MGI:6160392
Assay Type: RT-PCR
Annotation Date: 2018-06-12
Strength: Absent
Sex: Female
Emaps: EMAPS:360464
Stage: TS04
Assay Id: MGI:6160454
Age: embryonic day 3.5
Image: 2
Specimen Label: +m/-p
Detected: false
Specimen Num: 3
Allele  
Name: Ftx transcript, Xist regulator, non-protein coding; wild type
Allele Type: Not Specified
Allele  
Name: Jpx transcript, Xist activator (non-protein coding); wild type
Allele Type: Not Specified
Interaction Experiment
Description: ATRX directs binding of PRC2 to Xist RNA and Polycomb targets.
Publication
First Author: Hong YK
Year: 1999
Journal: Proc Natl Acad Sci U S A
Title: A new structure for the murine Xist gene and its relationship to chromosome choice/counting during X-chromosome inactivation.
Volume: 96
Issue: 12
Pages: 6829-34
Publication
First Author: Tian D
Year: 2010
Journal: Cell
Title: The long noncoding RNA, Jpx, is a molecular switch for X chromosome inactivation.
Volume: 143
Issue: 3
Pages: 390-403
Publication
First Author: Syrett CM
Year: 2017
Journal: PLoS Genet
Title: Loss of Xist RNA from the inactive X during B cell development is restored in a dynamic YY1-dependent two-step process in activated B cells.
Volume: 13
Issue: 10
Pages: e1007050
Allele  
Name: Ftx transcript, Xist regulator, non-protein coding; gene trap OST52237, Lexicon Genetics
Allele Type: Gene trapped
Allele
Name: Ftx transcript, Xist regulator, non-protein coding; targeted mutation 1.1, Masaru Okabe
Allele Type: Targeted
Attribute String: Null/knockout
Allele
Name: Jpx transcript, Xist activator (non-protein coding); endonuclease-mediated mutation 1, Edith Heard
Allele Type: Endonuclease-mediated
Attribute String: Null/knockout
Allele
Name: Jpx transcript, Xist activator (non-protein coding); endonuclease-mediated mutation 1, GemPharmatech Co., Ltd
Allele Type: Endonuclease-mediated
Attribute String: Null/knockout
Allele
Name: Jpx transcript, Xist activator (non-protein coding); endonuclease-mediated mutation 2, GemPharmatech Co., Ltd
Allele Type: Endonuclease-mediated
Attribute String: Conditional ready, No functional change
GXD Expression
Probe: MGI:6459732
Assay Type: RNA in situ
Annotation Date: 2020-10-05
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160506
Pattern: Not Specified
Stage: TS06
Assay Id: MGI:6459736
Age: embryonic day 4.25
Image: 2d
Note: Most of the Trophectoderm/Extraembryonic Ectoderm cells (70-95%) had one Xist cloud and a single Tsix spot.
Specimen Label: 2d
Detected: true
Specimen Num: 8
GXD Expression
Probe: MGI:6459732
Assay Type: RNA in situ
Annotation Date: 2020-10-05
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160506
Pattern: Not Specified
Stage: TS06
Assay Id: MGI:6459736
Age: embryonic day 4.5
Image: 2e
Note: Most of the Trophectoderm/Extraembryonic Ectoderm cells (70-95%) had one Xist cloud and a single Tsix spot.
Specimen Label: 2e
Detected: true
Specimen Num: 9
GXD Expression
Probe: MGI:6459732
Assay Type: RNA in situ
Annotation Date: 2020-10-05
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160507
Pattern: Not Specified
Stage: TS07
Assay Id: MGI:6459736
Age: embryonic day 4.75
Image: 1d,h
Note: Encircled is a single cell with two Xist clouds and a single Tsix signal.
Specimen Label: 1d,h
Detected: true
Specimen Num: 5
GXD Expression
Probe: MGI:6459732
Assay Type: RNA in situ
Annotation Date: 2020-10-05
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160508
Pattern: Not Specified
Stage: TS08
Assay Id: MGI:6459736
Age: embryonic day 5.5
Image: 1g,i
Note: Encircled is a cell with two Xist clouds and a single Tsix signal.
Specimen Label: 1g,i
Detected: true
Specimen Num: 6
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 1999
Title: Mouse Genome Informatics Orthology Assignments
GXD Expression
Probe: MGI:7495818
Assay Type: RNA in situ
Annotation Date: 2023-07-06
Strength: Present
Sex: Male
Emaps: EMAPS:360354
Pattern: Not Specified
Stage: TS04
Assay Id: MGI:7495948
Age: embryonic day 3.5
Image: 5B mz-/- male
Note: Expression was lost in those Xist RNA-coated X-chromosome.
Specimen Label: 5B mz-/- male
Detected: true
Specimen Num: 7
GXD Expression
Probe: MGI:7495818
Assay Type: RNA in situ
Annotation Date: 2023-07-06
Strength: Present
Sex: Male
Emaps: EMAPS:360354
Pattern: Not Specified
Stage: TS04
Assay Id: MGI:7495948
Age: embryonic day 3.5
Image: 5B mz-/- male delayed
Note: Expression was lost in those Xist RNA-coated X-chromosome.
Specimen Label: 5B mz-/- male delayed
Detected: true
Specimen Num: 8
Allele  
Name: Ftx transcript, Xist regulator, non-protein coding; gene trap IST14310F5, Texas A&M Institute for Genomic Medicine
Allele Type: Gene trapped
Allele  
Name: Ftx transcript, Xist regulator, non-protein coding; gene trap IST14461B7, Texas A&M Institute for Genomic Medicine
Allele Type: Gene trapped
Strain
Attribute String: F1 hybrid, mutant strain, targeted mutation
Strain
Attribute String: targeted mutation, mutant strain
Strain
Attribute String: coisogenic, mutant strain, targeted mutation
Strain
Attribute String: coisogenic, mutant strain, endonuclease-mediated mutation
Strain
Attribute String: coisogenic, endonuclease-mediated mutation, mutant strain
Genotype
Symbol: Ftx/?
Background: B6(Cg)-Ftx
Zygosity: ot
Has Mutant Allele: true
Genotype
Symbol: Ftx/?
Background: C57BL/6N-Ftx
Zygosity: ot
Has Mutant Allele: true
Genotype
Symbol: Ftx/Ftx
Background: C57BL/6N-Ftx
Zygosity: hm
Has Mutant Allele: true
GXD Expression
Probe: MGI:6459732
Assay Type: RNA in situ
Annotation Date: 2020-10-05
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160507
Pattern: Not Specified
Stage: TS07
Assay Id: MGI:6459736
Age: embryonic day 5.0
Image: 1e
Note: Shown is a single cell with one Xist pinpoint signal and two Tsix signals. 26% of the epiblast cells showed weak Xist expression as a pinpoint signal.
Specimen Label: 1e
Detected: true
Specimen Num: 3
GXD Expression
Probe: MGI:5609447
Assay Type: Immunohistochemistry
Annotation Date: 2018-12-10
Strength: Present
Sex: Female
Emaps: EMAPS:3187710
Pattern: Not Specified
Stage: TS10
Assay Id: MGI:6259666
Age: embryonic day 7.0
Image: S1C
Note: Partial overlap of Atrx label with Xist expression domain was noted.
Specimen Label: S1C
Detected: true
Specimen Num: 3
GXD Expression
Probe: MGI:7495820
Assay Type: Immunohistochemistry
Annotation Date: 2023-07-06
Strength: Present
Sex: Female
Emaps: EMAPS:360354
Pattern: Not Specified
Stage: TS04
Assay Id: MGI:7495828
Age: embryonic day 3.5
Image: 1A female
Note: Accumulation of Eed, H3K27me3 with Xist RNA in a vast majority of the nuclei (72-100%).
Specimen Label: 1A female
Detected: true
Specimen Num: 1
Genotype
Symbol: Ftx/Ftx<+>
Background: C57BL/6N-Ftx
Zygosity: ht
Has Mutant Allele: true
Genotype
Symbol: Jpx/Jpx<+>
Background: involves: C57BL/6 * DBA/2
Zygosity: ht
Has Mutant Allele: true
Genotype
Symbol: Ftx/Ftx<+>
Background: (C57BL/6N x B6(Cg)-Ftx)F1
Zygosity: ht
Has Mutant Allele: true
GXD Expression
Probe: MGI:6459732
Assay Type: RNA in situ
Annotation Date: 2020-10-05
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160415
Pattern: Not Specified
Stage: TS05
Assay Id: MGI:6459736
Age: embryonic day 3.75
Image: 1c
Note: Nuclear cloud signals began to disappear and cells showing biallelic expression of Tsix began to appear. Shown is a single cell with no Xist and a single Tsix signal.
Specimen Label: 1c
Detected: true
Specimen Num: 2
GXD Expression
Probe: MGI:6459732
Assay Type: RNA in situ
Annotation Date: 2020-10-05
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160415
Pattern: Not Specified
Stage: TS05
Assay Id: MGI:6459736
Age: embryonic day 3.5
Image: 1b
Note: More than 80% of inner cell mass cells had one Xist cloud and one pinpoint Tsix signal per nucleus. Shown is a single cell with one Xist cloud and a single Tsix signal.
Specimen Label: 1b
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:7281476
Assay Type: RNA in situ
Annotation Date: 2022-06-01
Strength: Present
Sex: Female
Emaps: EMAPS:160415
Pattern: Regionally restricted
Stage: TS05
Assay Id: MGI:7281486
Age: embryonic day 4.0
Note: A small proportion of cells contain no Xist RNA domain, and either one or two Xist/DXPas34 RNA pinpoint signals.
Specimen Label: 2O
Detected: true
Specimen Num: 3
GXD Expression  
Probe: MGI:7495820
Assay Type: Immunohistochemistry
Annotation Date: 2023-07-06
Strength: Absent
Sex: Female
Emaps: EMAPS:360354
Stage: TS04
Assay Id: MGI:7495828
Age: embryonic day 3.0-3.5
Image: 1B -/-
Note: Devoid of Eed or H3K27me3 enrichment overlapping with the Xist RNA coat (9 out of 41 female embryos).
Specimen Label: 1B -/-
Detected: false
Specimen Num: 4
GXD Expression
Probe: MGI:7495818
Assay Type: RNA in situ
Annotation Date: 2023-07-06
Strength: Present
Sex: Female
Emaps: EMAPS:360354
Pattern: Not Specified
Stage: TS04
Assay Id: MGI:7495948
Age: embryonic day 3.5
Image: 5A m-/- female
Note: Most nuclei displayed monoallelic expression. No expression in a subset displayed Xist RNA coating of both X-chromosomes.
Specimen Label: 5A m-/- female
Detected: true
Specimen Num: 5
GXD Expression
Probe: MGI:7495818
Assay Type: RNA in situ
Annotation Date: 2023-07-06
Strength: Present
Sex: Female
Emaps: EMAPS:360354
Pattern: Not Specified
Stage: TS04
Assay Id: MGI:7495948
Age: embryonic day 3.5
Image: 5A mz-/- female
Note: Most nuclei displayed monoallelic expression. No expression in a subset displayed Xist RNA coating of both X-chromosomes.
Specimen Label: 5A mz-/- female
Detected: true
Specimen Num: 6
Publication
First Author: Agrelo R
Year: 2009
Journal: Dev Cell
Title: SATB1 defines the developmental context for gene silencing by Xist in lymphoma and embryonic cells.
Volume: 16
Issue: 4
Pages: 507-16
Publication
First Author: Sarma K
Year: 2014
Journal: Cell
Title: ATRX directs binding of PRC2 to Xist RNA and Polycomb targets.
Volume: 159
Issue: 4
Pages: 869-83
GXD Expression
Probe: MGI:6459732
Assay Type: RNA in situ
Annotation Date: 2020-10-05
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160508
Pattern: Not Specified
Stage: TS08
Assay Id: MGI:6459736
Age: embryonic day 5.25
Image: 1f
Note: More than half of the cells (55%) had Xist signals with most of the cells showing dispersed Xist signals. Cells with Xist clouds began to appear. Shown is a single cell with one Xist dispersed signal and a single Tsix spot.
Specimen Label: 1f
Detected: true
Specimen Num: 4
HT Experiment  
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
GXD Expression
Probe: MGI:7495820
Assay Type: Immunohistochemistry
Annotation Date: 2023-07-06
Strength: Present
Sex: Female
Emaps: EMAPS:360354
Pattern: Not Specified
Stage: TS04
Assay Id: MGI:7495828
Age: embryonic day 3.0-3.5
Image: 1B +/-
Note: Coincident accumulation of Eed and/or H3K27me3 with Xist RNA in over 70% of the nuclei (9 out of 41 female embryos), similar as in the wild-type female.
Specimen Label: 1B +/-
Detected: true
Specimen Num: 3
HT Experiment  
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
Allele  
Name: inactive X specific transcripts; targeted mutation 2, Neil Brockdorff
Allele Type: Targeted
Allele
Name: inactive X specific transcripts; targeted mutation 3, Neil Brockdorff
Allele Type: Targeted
Attribute String: Null/knockout
Allele
Name: inactive X specific transcripts; targeted mutation 3.1, Neil Brockdorff
Allele Type: Targeted
Attribute String: Null/knockout
Allele
Name: ribosomal protein S12, pseudogene 1; targeted mutation 1, Neil Brockdorff
Allele Type: Targeted
Attribute String: Null/knockout
Allele
Name: inactive X specific transcripts; targeted mutation 1, Neil Brockdorff
Allele Type: Targeted
Attribute String: Null/knockout
Allele
Name: ribosomal protein S12, pseudogene 1; targeted mutation 1.1, Neil Brockdorff
Allele Type: Targeted
Attribute String: Null/knockout
Allele
Name: inactive X specific transcripts; targeted mutation 1, Neil Brockdorff
Allele Type: Targeted
Attribute String: Null/knockout
Allele
Name: X (inactive)-specific transcript, opposite strand; targeted mutation 3, Takashi Sado
Allele Type: Targeted
Attribute String: Null/knockout
Allele
Name: inactive X specific transcripts; targeted mutation 3, Takashi Sado
Allele Type: Targeted
Attribute String: Null/knockout
Allele
Name: trisomy, Chr 16 translocation to Chr 17, Jeanne Lawrence 67
Allele Type: Endonuclease-mediated
Attribute String: Inserted expressed sequence
HT Experiment  
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
Publication
First Author: Chao W
Year: 2002
Journal: Science
Title: CTCF, a candidate trans-acting factor for X-inactivation choice.
Volume: 295
Issue: 5553
Pages: 345-7
HT Experiment  
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
GXD Expression
Probe: MGI:5609447
Assay Type: Immunohistochemistry
Annotation Date: 2018-12-10
Strength: Present
Sex: Female
Emaps: EMAPS:1604210
Pattern: Regionally restricted
Stage: TS10
Assay Id: MGI:6259666
Age: embryonic day 7.0
Image: S1B
Note: There was no overlap of the Atrx protein with Xist staining in the two nuclei from chorion shown in the figure. Only 5.8% of chorion nuclei show partial overlap of expression.
Specimen Label: S1B
Detected: true
Specimen Num: 2
GXD Expression  
Probe: MGI:7281476
Assay Type: RNA in situ
Annotation Date: 2022-06-01
Strength: Present
Sex: Female
Emaps: EMAPS:160404
Pattern: Regionally restricted
Stage: TS04
Assay Id: MGI:7281486
Age: embryonic day 3.5
Note: Most cells contain a Xist domain corresponding to the paternal X with no sign of DXPas34 RNA within such domains and a proportion of these cells also contain a Xist/DXPas34 RNA pinpoint signal.
Specimen Label: 2N
Detected: true
Specimen Num: 2
Publication
First Author: Lee JT
Year: 1999
Journal: Cell
Title: Targeted mutagenesis of Tsix leads to nonrandom X inactivation.
Volume: 99
Issue: 1
Pages: 47-57
Publication
First Author: Lee JT
Year: 2000
Journal: Cell
Title: Disruption of imprinted X inactivation by parent-of-origin effects at Tsix.
Volume: 103
Issue: 1
Pages: 17-27
Publication
First Author: Cohen DE
Year: 2007
Journal: Dev Cell
Title: The DXPas34 repeat regulates random and imprinted X inactivation.
Volume: 12
Issue: 1
Pages: 57-71
Strain
Attribute String: mutant stock, endonuclease-mediated mutation, chromosome aberration
Genotype
Symbol: Xist/Xist<+>
Background: involves: 129P2/OlaHsd * C57BL/6
Zygosity: ht
Has Mutant Allele: true
Genotype
Symbol: Xist/Xist<+>
Background: involves: 129P2/OlaHsd * C57BL/6
Zygosity: ht
Has Mutant Allele: true
Genotype
Symbol: Rps12-ps1/Xist/Rps12-ps1<+>
Background: involves: 129P2/OlaHsd * C57BL/6
Zygosity: ht
Has Mutant Allele: true
Genotype
Symbol: Rps12-ps1/Xist/Xist<+>
Background: involves: 129P2/OlaHsd * C57BL/6
Zygosity: ht
Has Mutant Allele: true
Genotype
Symbol: Rps12-ps1/Xist/Rps12-ps1<+>
Background: involves: 129P2/OlaHsd * C57BL/6
Zygosity: ht
Has Mutant Allele: true
Genotype
Symbol: Rps12-ps1/Xist/Xist<+>
Background: involves: 129P2/OlaHsd * C57BL/6
Zygosity: ht
Has Mutant Allele: true
Genotype
Symbol: Tsix/Xist/Tsix<+>
Background: involves: 129S1/Sv * 129S4/SvJae * 129X1/SvJ
Zygosity: ht
Has Mutant Allele: true