Type |
Details |
Score |
Genotype |
Symbol: |
Dbt/Dbt Tg(tetO-DBT)525AGeh/? Tg(Cebpb-tTA)5Bjd/? |
Background: |
involves: 129S1/Sv * 129X1/SvJ * C57BL/6J * FVB * NMRI |
Zygosity: |
cx |
Has Mutant Allele: |
true |
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•
•
•
•
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Genotype |
Symbol: |
Kdr/Kdr<+> Tg(tetO-Kdr*)4377.5Rwng/? Tg(Cebpb-tTA)5Bjd/? |
Background: |
involves: 129S1/Sv * 129X1/SvJ * FVB/N * NMRI |
Zygosity: |
cx |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
211
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
66
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
118
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Grant PA |
Year: |
1997 |
Journal: |
Genes Dev |
Title: |
Yeast Gcn5 functions in two multisubunit complexes to acetylate nucleosomal histones: characterization of an Ada complex and the SAGA (Spt/Ada) complex. |
Volume: |
11 |
Issue: |
13 |
Pages: |
1640-50 |
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•
•
•
•
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Protein Domain |
Type: |
Family |
Description: |
This entry includes histone acetyltransferases GCN5, KAT2A and KAT2B (all of which are included in ). GCN5 acetylates histones H2B, H3 and H4, providing a specific tag for epigenetic transcription activation. GCN5 is a component of the transcription regulatory histone acetylation (HAT) complexes SAGA [], SLIK [], SALSA []and ADA []. Mammals have two paralogues: KAT2A (also known as GCN5) and KAT2B. KAT2A acetylates core histones to provide a specific tag for epigenetic transcription activation, but not nucleosome core particles. It also acetylates proteins such as CEBPB []. KAT2A is a component of the ATAC complex, which has acetyltransferase activity on histones H3 and H4 []. KAT2B (also known as P300/calcium-binding protein (CBP)-associated factor or PCAF) can acetylate the core histones H3 and H4 as well as nucleosome core particles and non-histone proteins such as ACLY [].The transcription regulatory histone acetylation complex Spt-Ada-Gcn5 acetyltransferase (SAGA) is involved in RNA polymerase II-dependent transcriptional regulation of approximately 10% of yeast genes. SAGA preferentially acetylates histones H3 and H2B and deubiquitinates histone H2B []. SAGA is known as PCAF in vertebrates and PCAF acetylates nucleosomal histone H3 []. The SAGA complex consists of at least TRA1, CHD1, SPT7, TAF5, ADA3, SGF73, SPT20/ADA5, SPT8, TAF12, TAF6, HFI1/ADA1, UBP8, GCN5, ADA2, SPT3, SGF29, TAF10, TAF9, SGF11 and SUS1, and some of these components are present as two copies. The complex is built up from distinct modules, each of which has a separate function and crosslinks with either other proteins or other modules in the complex [].SLIK (SAGA-like) is a multi-subunit histone acetyltransferase complex that preferentially acetylates histones H3 and H2B and deubiquitinates histone H2B. It is an embellishment of the SAGA complex. The yeast SLIK complex consists of at least TRA1, CHD1, SPT7, CC TAF5, ADA3, SPT20, RTG2, TAF12, TAF6, HFI1, UBP8 (a deubiquitinase), GCN5, ADA2, SPT3, SGF29, TAF10 and TAF9 [, ].The yeast SALSA complex is an altered form of the SAGA complex and consists of at least TRA1, SPT7 (C-terminal truncated form), TAF5, ADA3, SPT20, TAF12, TAF6, HFI1, GCN5, ADA2 and SPT3 [].The ADA complex is a transcription regulatory histone acetylation (HAT) complex. ADA preferentially acetylates nucleosomal histones H3 (at 'Lys-14' and 'Lys-18') and H2B. The complex consists of at least ADA2, ADA3, AHC1, and GCN5. AHC1 is required for the overall structural integrity of the ADA complex []. |
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Publication |
First Author: |
Le JA |
Year: |
2012 |
Journal: |
Biol Reprod |
Title: |
Generation of mice expressing only the long form of the prolactin receptor reveals that both isoforms of the receptor are required for normal ovarian function. |
Volume: |
86 |
Issue: |
3 |
Pages: |
86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Li Z |
Year: |
2015 |
Journal: |
Cell Metab |
Title: |
Hypothalamic Amylin Acts in Concert with Leptin to Regulate Food Intake. |
Volume: |
22 |
Issue: |
6 |
Pages: |
1059-67 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ma C |
Year: |
2022 |
Journal: |
Cancer Cell |
Title: |
Platelets control liver tumor growth through P2Y12-dependent CD40L release in NAFLD. |
Volume: |
40 |
Issue: |
9 |
Pages: |
986-998.e5 |
|
•
•
•
•
•
|
Publication |
First Author: |
O'Donnell KA |
Year: |
2012 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
A Sleeping Beauty mutagenesis screen reveals a tumor suppressor role for Ncoa2/Src-2 in liver cancer. |
Volume: |
109 |
Issue: |
21 |
Pages: |
E1377-86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Schönig K |
Year: |
2011 |
Journal: |
Transgenic Res |
Title: |
Development of a BAC vector for integration-independent and tight regulation of transgenes in rodents via the Tet system. |
Volume: |
20 |
Issue: |
3 |
Pages: |
709-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ney JT |
Year: |
2009 |
Journal: |
Hepatology |
Title: |
Autochthonous liver tumors induce systemic T cell tolerance associated with T cell receptor down-modulation. |
Volume: |
49 |
Issue: |
2 |
Pages: |
471-81 |
|
•
•
•
•
•
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Publication |
First Author: |
Lin R |
Year: |
2013 |
Journal: |
Mol Cell |
Title: |
Acetylation stabilizes ATP-citrate lyase to promote lipid biosynthesis and tumor growth. |
Volume: |
51 |
Issue: |
4 |
Pages: |
506-518 |
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•
•
•
•
•
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Publication |
First Author: |
Grant PA |
Year: |
1999 |
Journal: |
J Biol Chem |
Title: |
Expanded lysine acetylation specificity of Gcn5 in native complexes. |
Volume: |
274 |
Issue: |
9 |
Pages: |
5895-900 |
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•
•
•
•
|
Publication |
First Author: |
Grant PA |
Year: |
1998 |
Journal: |
Mol Cell |
Title: |
The ATM-related cofactor Tra1 is a component of the purified SAGA complex. |
Volume: |
2 |
Issue: |
6 |
Pages: |
863-7 |
|
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•
•
•
•
|
Publication |
First Author: |
Paglialunga S |
Year: |
2008 |
Journal: |
Am J Physiol Endocrinol Metab |
Title: |
Acylation-stimulating protein deficiency and altered adipose tissue in alternative complement pathway knockout mice. |
Volume: |
294 |
Issue: |
3 |
Pages: |
E521-9 |
|
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•
•
•
•
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Publication |
First Author: |
Carpenter B |
Year: |
2005 |
Journal: |
Development |
Title: |
VEGF is crucial for the hepatic vascular development required for lipoprotein uptake. |
Volume: |
132 |
Issue: |
14 |
Pages: |
3293-303 |
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•
•
•
•
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Publication |
First Author: |
Sun X |
Year: |
2017 |
Journal: |
Cancer Cell |
Title: |
Arid1a Has Context-Dependent Oncogenic and Tumor Suppressor Functions in Liver Cancer. |
Volume: |
32 |
Issue: |
5 |
Pages: |
574-589.e6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bakiri L |
Year: |
2024 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Liver cancer development driven by the AP-1/c-Jun~Fra-2 dimer through c-Myc. |
Volume: |
121 |
Issue: |
18 |
Pages: |
e2404188121 |
|
•
•
•
•
•
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Publication |
First Author: |
Méndez-Lucas A |
Year: |
2020 |
Journal: |
Nat Metab |
Title: |
Identifying strategies to target the metabolic flexibility of tumours. |
Volume: |
2 |
Issue: |
4 |
Pages: |
335-350 |
|
•
•
•
•
•
|
Publication |
First Author: |
Homanics GE |
Year: |
2006 |
Journal: |
BMC Med Genet |
Title: |
Production and characterization of murine models of classic and intermediate maple syrup urine disease. |
Volume: |
7 |
|
Pages: |
33 |
|
•
•
•
•
•
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Publication |
First Author: |
Guelman S |
Year: |
2009 |
Journal: |
Mol Cell Biol |
Title: |
The double-histone-acetyltransferase complex ATAC is essential for mammalian development. |
Volume: |
29 |
Issue: |
5 |
Pages: |
1176-88 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
116
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
660
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang G |
Year: |
2020 |
Journal: |
Nat Commun |
Title: |
Arf1-mediated lipid metabolism sustains cancer cells and its ablation induces anti-tumor immune responses in mice. |
Volume: |
11 |
Issue: |
1 |
Pages: |
220 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hasenfuss SC |
Year: |
2014 |
Journal: |
Hepatology |
Title: |
Activator Protein 1 transcription factor Fos-related antigen 1 (Fra-1) is dispensable for murine liver fibrosis, but modulates xenobiotic metabolism. |
Volume: |
59 |
Issue: |
1 |
Pages: |
261-73 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
473
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Tilli MT |
Year: |
2003 |
Journal: |
Breast Cancer Res |
Title: |
Conditional mouse models demonstrate oncogene-dependent differences in tumor maintenance and recurrence. |
Volume: |
5 |
Issue: |
4 |
Pages: |
202-5 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
813
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
830
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
829
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
830
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
833
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
813
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Sterner DE |
Year: |
2002 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
SALSA, a variant of yeast SAGA, contains truncated Spt7, which correlates with activated transcription. |
Volume: |
99 |
Issue: |
18 |
Pages: |
11622-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hasenfuss SC |
Year: |
2014 |
Journal: |
Cell Metab |
Title: |
Regulation of steatohepatitis and PPARγ signaling by distinct AP-1 dimers. |
Volume: |
19 |
Issue: |
1 |
Pages: |
84-95 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pray-Grant MG |
Year: |
2005 |
Journal: |
Nature |
Title: |
Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation. |
Volume: |
433 |
Issue: |
7024 |
Pages: |
434-8 |
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•
•
•
•
|
Publication |
First Author: |
Pray-Grant MG |
Year: |
2002 |
Journal: |
Mol Cell Biol |
Title: |
The novel SLIK histone acetyltransferase complex functions in the yeast retrograde response pathway. |
Volume: |
22 |
Issue: |
24 |
Pages: |
8774-86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Han Y |
Year: |
2014 |
Journal: |
EMBO J |
Title: |
Architecture of the Saccharomyces cerevisiae SAGA transcription coactivator complex. |
Volume: |
33 |
Issue: |
21 |
Pages: |
2534-46 |
|
•
•
•
•
•
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Publication |
First Author: |
Ogryzko VV |
Year: |
1998 |
Journal: |
Cell |
Title: |
Histone-like TAFs within the PCAF histone acetylase complex. |
Volume: |
94 |
Issue: |
1 |
Pages: |
35-44 |
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