| Type |
Details |
Score |
| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics and Ensembl Genome Database Project |
| Year: |
2026 |
| Journal: |
Database Release |
| Title: |
MGI Strain Genome Feature and Gene Model Load from Ensembl. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bairoch A |
| Year: |
1999 |
| Journal: |
Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Group |
| Year: |
2003 |
| Journal: |
Database Procedure |
| Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
751
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yim KM |
| Year: |
2024 |
| Journal: |
bioRxiv |
| Title: |
Cell type-specific dysregulation of gene expression due to Chd8 haploinsufficiency during mouse cortical development. |
|
|
|
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Shen C |
| Year: |
2015 |
| Journal: |
Mol Cell |
| Title: |
NSD3-Short Is an Adaptor Protein that Couples BRD4 to the CHD8 Chromatin Remodeler. |
| Volume: |
60 |
| Issue: |
6 |
| Pages: |
847-59 |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Batsukh T |
| Year: |
2012 |
| Journal: |
PLoS One |
| Title: |
Identification and characterization of FAM124B as a novel component of a CHD7 and CHD8 containing complex. |
| Volume: |
7 |
| Issue: |
12 |
| Pages: |
e52640 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Waterhouse M |
| Year: |
2025 |
| Journal: |
EMBO J |
| Title: |
CHD8 interacts with BCL11A to induce oncogenic transcription in triple negative breast cancer. |
| Volume: |
44 |
| Issue: |
12 |
| Pages: |
3448-3467 |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7491678 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2023-06-20 |
| Strength: |
Trace |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3284228 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:7491681 |
| Age: |
postnatal day 20 |
|
| Note: |
Very low expression in neocortex compared to that of Chd8 and Chd2. |
| Specimen Label: |
6Bc |
| Detected: |
true |
| Specimen Num: |
33 |
|
•
•
•
•
•
|
| Allele |
| Name: |
chromodomain helicase DNA binding protein 8; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Manning BJ |
| Year: |
2017 |
| Journal: |
J Biol Chem |
| Title: |
The ATP-dependent chromatin remodeling enzymes CHD6, CHD7, and CHD8 exhibit distinct nucleosome binding and remodeling activities. |
| Volume: |
292 |
| Issue: |
28 |
| Pages: |
11927-11936 |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
| Allele |
| Name: |
chromodomain helicase DNA binding protein 8; targeted mutation 2.1, Keiichi I Nakayama |
| Allele Type: |
Targeted |
| Attribute String: |
Modified isoform(s) |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
congenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
targeted mutation, mutant strain, congenic |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Chd8/Chd8<+> |
| Background: |
B6J.129P2-Chd8 |
| Zygosity: |
ht |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Chd8/Chd8 |
| Background: |
involves: 129P2/OlaHsd * C57BL/6J |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Chd8/Chd8<+> |
| Background: |
involves: 129P2/OlaHsd * C57BL/6J |
| Zygosity: |
ht |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Surapureddi S |
| Year: |
2006 |
| Journal: |
Biochem Biophys Res Commun |
| Title: |
PRIC320, a transcription coactivator, isolated from peroxisome proliferator-binding protein complex. |
| Volume: |
343 |
| Issue: |
2 |
| Pages: |
535-43 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Nioi P |
| Year: |
2005 |
| Journal: |
Mol Cell Biol |
| Title: |
The carboxy-terminal Neh3 domain of Nrf2 is required for transcriptional activation. |
| Volume: |
25 |
| Issue: |
24 |
| Pages: |
10895-906 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
This domain is found in human Chromodomain-helicase-DNA-binding proteins 6-9 (CHD6-9) which are DNA-dependent ATPases that play a role in chromatin remodelling and transcriptional regulation [, , ]. CHD8 acts as a transcription repressor by remodelling chromatin structure and recruiting histone H1 to target genes. It suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. It also acts as a negative regulator of Wnt signalling pathway by regulating beta-catenin (CTNNB1) activity [, ]. CHD6 regulates transcription by disrupting nucleosomes in a largely non-sliding manner which strongly increases the accessibility of chromatin. It activates transcription of specific genes in response to oxidative stress through interaction with NFE2L2 [, ]. CHD9 acts as a transcriptional coactivator for PPARA and possibly other nuclear receptors [].This domain is predicted to form a tri-helical structure, with a three-membered ��-helical bundle and a two-stranded antiparallel ��-sheet. Members of this family are predominantly found in vertebrates. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Rowland ME |
| Year: |
2023 |
| Journal: |
Nat Commun |
| Title: |
Systemic and intrinsic functions of ATRX in glial cell fate and CNS myelination in male mice. |
| Volume: |
14 |
| Issue: |
1 |
| Pages: |
7090 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Menon T |
| Year: |
2010 |
| Journal: |
Mol Endocrinol |
| Title: |
Regulation of androgen-responsive transcription by the chromatin remodeling factor CHD8. |
| Volume: |
24 |
| Issue: |
6 |
| Pages: |
1165-74 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Huang Y |
| Year: |
2026 |
| Journal: |
Adv Sci (Weinh) |
| Title: |
CHD8-Dependent Chromatin Licensing Sustains Trophoblast Stem Cell Transcriptional Programs. |
|
|
| Pages: |
e77823 |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Chd8/Chd8 Tg(Ddx4-cre)1Dcas/? |
| Background: |
involves: 129P2/OlaHsd * C57BL/6J * FVB |
| Zygosity: |
cn |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
1031
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Trost M |
| Year: |
2009 |
| Journal: |
Immunity |
| Title: |
The phagosomal proteome in interferon-gamma-activated macrophages. |
| Volume: |
30 |
| Issue: |
1 |
| Pages: |
143-54 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
2986
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
2711
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
2885
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
2884
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Huttlin EL |
| Year: |
2010 |
| Journal: |
Cell |
| Title: |
A tissue-specific atlas of mouse protein phosphorylation and expression. |
| Volume: |
143 |
| Issue: |
7 |
| Pages: |
1174-89 |
|
•
•
•
•
•
|