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Search results 901 to 1000 out of 1017 for Irx1

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Type Details Score
GXD Expression
GXD Expression
Probe: MGI:7612517
Assay Type: RNA in situ
Annotation Date: 2024-03-22
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3674020
Pattern: Regionally restricted
Stage: TS20
Assay Id: MGI:7615071
Age: embryonic day 12.0
Image: 4B center
Note: Expression was detected in the non-initiation knot basal layer of the incisor and molar.
Specimen Label: 4B center
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
Probe: MGI:7614270
Assay Type: RNA in situ
Annotation Date: 2024-03-22
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3674020
Pattern: Regionally restricted
Stage: TS20
Assay Id: MGI:7615072
Age: embryonic day 12.0
Image: 4B right In
Note: Expression was detected in the non-initiation knot basal layer of the incisor.
Specimen Label: 4B right In
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
Probe: MGI:7614270
Assay Type: RNA in situ
Annotation Date: 2024-03-22
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3674020
Pattern: Regionally restricted
Stage: TS20
Assay Id: MGI:7615072
Age: embryonic day 12.0
Image: 4B right Mo
Note: Expression was detected in the non-initiation knot basal layer of the molar.
Specimen Label: 4B right Mo
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
   
Probe: MGI:5661214
Assay Type: RNA in situ
Annotation Date: 2015-09-11
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:3803721
Stage: TS21
Assay Id: MGI:5661531
Age: embryonic day 13.5
Note: There is virtually no expression in the mammary gland.
Specimen Label: not shown
Detected: false
Specimen Num: 20
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GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808227
Pattern: Regionally restricted
Stage: TS27
Assay Id: MGI:7258174
Age: postnatal day 0
Image: 3C lower incisor (inset right)
Specimen Label: 3C lower incisor (inset right)
Detected: true
Specimen Num: 20
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GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808227
Pattern: Regionally restricted
Stage: TS27
Assay Id: MGI:7258174
Age: postnatal day 0
Image: 3C Molar (inset)
Specimen Label: 3C Molar (inset)
Detected: true
Specimen Num: 22
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GXD Expression
GXD Expression
Probe: MGI:7258131
Assay Type: Immunohistochemistry
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808226
Pattern: Regionally restricted
Stage: TS26
Assay Id: MGI:7258175
Age: embryonic day 18.5
Image: 3D Irx1+/+ Incisor (lower)
Note: In late bell stage teeth, expression limited to outer enamel epithelium, stratum intermedium and stellate reticulum.
Specimen Label: 3D Irx1+/+ Incisor (lower)
Detected: true
Specimen Num: 4
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•
GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808627
Pattern: Regionally restricted
Stage: TS27
Assay Id: MGI:7258174
Age: postnatal day 0
Image: 3C lower incisor (inset left)
Specimen Label: 3C lower incisor (inset left)
Detected: true
Specimen Num: 19
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•
GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808627
Pattern: Regionally restricted
Stage: TS27
Assay Id: MGI:7258174
Age: postnatal day 0
Image: 3C lower incisor (inset right)
Specimen Label: 3C lower incisor (inset right)
Detected: true
Specimen Num: 20
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•
GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808627
Pattern: Regionally restricted
Stage: TS27
Assay Id: MGI:7258174
Age: postnatal day 0
Image: 3C Molar (inset)
Specimen Label: 3C Molar (inset)
Detected: true
Specimen Num: 22
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•
GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808627
Pattern: Regionally restricted
Stage: TS27
Assay Id: MGI:7258174
Age: postnatal day 0
Image: 8C Irx1+/-
Specimen Label: 8C Irx1+/-
Detected: true
Specimen Num: 25
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GXD Expression
GXD Expression
 
Assay Type: In situ reporter (knock in)
Annotation Date: 2022-03-30
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:3808627
Pattern: Regionally restricted
Stage: TS27
Assay Id: MGI:7258174
Age: postnatal day 0
Image: 8C Irx1-/-
Note: Fewer expressing cells in outer enamel epithelium.
Specimen Label: 8C Irx1-/-
Detected: true
Specimen Num: 26
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GXD Expression
GXD Expression
Probe: MGI:7258131
Assay Type: Immunohistochemistry
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808626
Pattern: Regionally restricted
Stage: TS26
Assay Id: MGI:7258175
Age: embryonic day 18.5
Image: 3D Irx1+/+ Incisor (upper)
Note: In late bell stage teeth, expression limited to outer enamel epithelium, stratum intermedium and stellate reticulum.
Specimen Label: 3D Irx1+/+ Incisor (upper)
Detected: true
Specimen Num: 3
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•
GXD Expression
GXD Expression
Probe: MGI:7258131
Assay Type: Immunohistochemistry
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808626
Pattern: Regionally restricted
Stage: TS26
Assay Id: MGI:7258175
Age: embryonic day 18.5
Image: 3D Irx1+/+ Incisor (lower)
Note: In late bell stage teeth, expression limited to outer enamel epithelium, stratum intermedium and stellate reticulum.
Specimen Label: 3D Irx1+/+ Incisor (lower)
Detected: true
Specimen Num: 4
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•
GXD Expression
GXD Expression
Probe: MGI:7258131
Assay Type: Immunohistochemistry
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808626
Pattern: Regionally restricted
Stage: TS26
Assay Id: MGI:7258175
Age: embryonic day 18.5
Image: 3D Irx1+/+ Molar
Note: In late bell stage teeth, expression limited to outer enamel epithelium, stratum intermedium and stellate reticulum.
Specimen Label: 3D Irx1+/+ Molar
Detected: true
Specimen Num: 5
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•
GXD Expression
GXD Expression
Probe: MGI:7258131
Assay Type: Immunohistochemistry
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808626
Pattern: Regionally restricted
Stage: TS26
Assay Id: MGI:7258176
Age: embryonic day 18.5
Image: 8B
Note: Expression in outer enamel epithelium cells, adjacent and separate from Sox2-expressing cells in labial cervical loop.
Specimen Label: 8B
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
Probe: MGI:7258131
Assay Type: Immunohistochemistry
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808626
Pattern: Regionally restricted
Stage: TS26
Assay Id: MGI:7258176
Age: embryonic day 18.5
Image: 8B (inset)
Note: Expression in outer enamel epithelium cells, adjacent and separate from Sox2-expressing cells in labial cervical loop
Specimen Label: 8B (inset)
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808127
Pattern: Regionally restricted
Stage: TS27
Assay Id: MGI:7258174
Age: postnatal day 0
Image: 3C lower incisor (inset left)
Specimen Label: 3C lower incisor (inset left)
Detected: true
Specimen Num: 19
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•
GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808127
Pattern: Regionally restricted
Stage: TS27
Assay Id: MGI:7258174
Age: postnatal day 0
Image: 3C Molar (inset)
Specimen Label: 3C Molar (inset)
Detected: true
Specimen Num: 22
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•
GXD Expression
GXD Expression
Probe: MGI:7258131
Assay Type: Immunohistochemistry
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808126
Pattern: Regionally restricted
Stage: TS26
Assay Id: MGI:7258175
Age: embryonic day 18.5
Image: 3D Irx1+/+ Incisor (upper)
Note: In late bell stage teeth, expression limited to outer enamel epithelium, stratum intermedium and stellate reticulum.
Specimen Label: 3D Irx1+/+ Incisor (upper)
Detected: true
Specimen Num: 3
•
•
•
•
•
GXD Expression
GXD Expression
Probe: MGI:7258131
Assay Type: Immunohistochemistry
Annotation Date: 2022-03-30
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3808126
Pattern: Regionally restricted
Stage: TS26
Assay Id: MGI:7258175
Age: embryonic day 18.5
Image: 3D Irx1+/+ Incisor (lower)
Note: In late bell stage teeth, expression limited to outer enamel epithelium, stratum intermedium and stellate reticulum.
Specimen Label: 3D Irx1+/+ Incisor (lower)
Detected: true
Specimen Num: 4
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•
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•
GXD Expression
GXD Expression
Probe: MGI:7614270
Assay Type: RNA in situ
Annotation Date: 2024-03-22
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3826220
Pattern: Regionally restricted
Stage: TS20
Assay Id: MGI:7615072
Age: embryonic day 12.0
Image: 7E
Note: Expression was detected in the dental epithelium. Some overlap with Cxcl14 expression was observed at the anterior boundary (2-4 cells) and with Dmrt2 expression at the posterior boundary.
Specimen Label: 7E
Detected: true
Specimen Num: 7
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GXD Expression
GXD Expression
Probe: MGI:7614270
Assay Type: RNA in situ
Annotation Date: 2024-03-22
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3826220
Pattern: Regionally restricted
Stage: TS20
Assay Id: MGI:7615072
Age: embryonic day 12.0
Image: S9C E12.0
Note: Expression was detected in dental epithelium.
Specimen Label: S9C E12.0
Detected: true
Specimen Num: 10
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GXD Expression
GXD Expression
Probe: MGI:7614270
Assay Type: RNA in situ
Annotation Date: 2024-03-22
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3826220
Pattern: Regionally restricted
Stage: TS20
Assay Id: MGI:7615072
Age: embryonic day 12.5
Image: S9C E12.5
Note: Expression was detected in dental epithelium.
Specimen Label: S9C E12.5
Detected: true
Specimen Num: 11
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GXD Expression
GXD Expression
   
Probe: MGI:6175601
Assay Type: RNA in situ
Annotation Date: 2024-07-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:3828219
Stage: TS19
Assay Id: MGI:7664429
Age: embryonic day 11.5
Image: 2s
Specimen Label: 2s
Detected: false
Specimen Num: 1
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Publication
8058156 | J:45863
First Author: Ptáĉek LJ
Year: 1994
Journal: Neurology
Title: Sodium channel mutations in acetazolamide-responsive myotonia congenita, paramyotonia congenita, and hyperkalemic periodic paralysis.
Volume: 44
Issue: 8
Pages: 1500-3
•
•
•
•
•
Publication
9486539 | J:45683
First Author: Bosse A
Year: 1997
Journal: Mech Dev
Title: Identification of the vertebrate Iroquois homeobox gene family with overlapping expression during early development of the nervous system.
Volume: 69
Issue: 1-2
Pages: 169-81
•
•
•
•
•
Publication
10704856 | J:61328
First Author: Cohen DR
Year: 2000
Journal: Mech Dev
Title: Expression of two novel mouse Iroquois homeobox genes during neurogenesis.
Volume: 91
Issue: 1-2
Pages: 317-21
•
•
•
•
•
Publication
10822268 | J:62062
First Author: Bosse A
Year: 2000
Journal: Dev Dyn
Title: Identification of a novel mouse Iroquois homeobox gene, Irx5, and chromosomal localisation of all members of the mouse Iroquois gene family.
Volume: 218
Issue: 1
Pages: 160-74
•
•
•
•
•
Publication
11042145 | J:65170
First Author: Peters T
Year: 2000
Journal: Genome Res
Title: Organization of mouse Iroquois homeobox genes in two clusters suggests a conserved regulation and function in vertebrate development.
Volume: 10
Issue: 10
Pages: 1453-62
•
•
•
•
•
Publication
11714685 | J:73527
First Author: Ferguson CA
Year: 2001
Journal: Development
Title: The role of effectors of the activin signalling pathway, activin receptors IIA and IIB, and Smad2, in patterning of tooth development.
Volume: 128
Issue: 22
Pages: 4605-13
•
•
•
•
•
Publication
16299054 | J:105309
First Author: van Tuyl M
Year: 2006
Journal: Am J Physiol Lung Cell Mol Physiol
Title: Iroquois genes influence proximo-distal morphogenesis during rat lung development.
Volume: 290
Issue: 4
Pages: L777-L789
•
•
•
•
•
Publication
33348080 | J:306135
 
First Author: Shimizu R
Year: 2021
Journal: Biochem Biophys Res Commun
Title: Decrease in the T-box1 gene expression in embryonic brain and adult hippocampus of down syndrome mouse models.
Volume: 535
Pages: 87-92
•
•
•
•
•
Publication
11118473 | J:66436
First Author: Moorman AF
Year: 2001
Journal: J Histochem Cytochem
Title: Sensitive nonradioactive detection of mRNA in tissue sections: novel application of the whole-mount in situ hybridization protocol.
Volume: 49
Issue: 1
Pages: 1-8
•
•
•
•
•
Publication
36773339 | J:333713
 
First Author: Narwidina A
Year: 2023
Journal: Biochem Biophys Res Commun
Title: Iroquois homeobox 3 regulates odontoblast proliferation and differentiation mediated by Wnt5a expression.
Volume: 650
Pages: 47-54
•
•
•
•
•
Publication
14585979 | J:86477
First Author: Lebel M
Year: 2003
Journal: Mol Cell Biol
Title: The Iroquois homeobox gene Irx2 is not essential for normal development of the heart and midbrain-hindbrain boundary in mice.
Volume: 23
Issue: 22
Pages: 8216-25
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•
•
•
Publication
- | J:344138
     
First Author: The Centre for Phenogenomics
Year: 2024
Journal: MGI Direct Data Submission
Title: Strains and alleles submitted by The Centre for Phenogenomics
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Publication
30745426 | J:272612
 
First Author: Eyal S
Year: 2019
Journal: Development
Title: Common cellular origin and diverging developmental programs for different sesamoid bones.
Volume: 146
Issue: 4
•
•
•
•
•
Publication
37442233 | J:338900
First Author: Huang R
Year: 2023
Journal: J Biol Chem
Title: ISL1 regulates lung branching morphogenesis via Shh signaling pathway.
Volume: 299
Issue: 8
Pages: 105034
•
•
•
•
•
Publication
39286503 | J:354246
First Author: Zhu S
Year: 2024
Journal: iScience
Title: Follistatin controls the number of murine teeth by limiting TGF-β signaling.
Volume: 27
Issue: 9
Pages: 110785
•
•
•
•
•
Publication
16354917 | J:123264
First Author: Quina LA
Year: 2005
Journal: J Neurosci
Title: Brn3a-expressing retinal ganglion cells project specifically to thalamocortical and collicular visual pathways.
Volume: 25
Issue: 50
Pages: 11595-604
•
•
•
•
•
Publication
33529466 | J:308790
First Author: Sweat M
Year: 2021
Journal: Stem Cells
Title: The miR-200 family is required for ectodermal organ development through the regulation of the epithelial stem cell niche.
Volume: 39
Issue: 6
Pages: 761-775
•
•
•
•
•
Publication
24528677 | J:224508
 
First Author: Chatterjee M
Year: 2014
Journal: BMC Biol
Title: Pax6 regulates the formation of the habenular nuclei by controlling the temporospatial expression of Shh in the diencephalon in vertebrates.
Volume: 12
Pages: 13
•
•
•
•
•
Publication
15789444 | J:98371
First Author: Götz K
Year: 2005
Journal: Dev Dyn
Title: Homozygous Ft embryos are affected in floor plate maintenance and ventral neural tube patterning.
Volume: 233
Issue: 2
Pages: 623-30
•
•
•
•
•
Publication
31923647 | J:306907
First Author: Kodani N
Year: 2020
Journal: iScience
Title: FCoR-Foxo1 Axis Regulates α-Cell Mass through Repression of Arx Expression.
Volume: 23
Issue: 1
Pages: 100798
•
•
•
•
•
Publication
28846746 | J:244992
First Author: Gomez-Velazquez M
Year: 2017
Journal: PLoS Genet
Title: CTCF counter-regulates cardiomyocyte development and maturation programs in the embryonic heart.
Volume: 13
Issue: 8
Pages: e1006985
•
•
•
•
•
Publication
15253936 | J:92061
First Author: Eng SR
Year: 2004
Journal: Development
Title: Coordinated regulation of gene expression by Brn3a in developing sensory ganglia.
Volume: 131
Issue: 16
Pages: 3859-70
•
•
•
•
•
Publication
32580935 | J:297087
 
First Author: Bian Q
Year: 2020
Journal: Development
Title: A single cell transcriptional atlas of early synovial joint development.
Volume: 147
Issue: 14
•
•
•
•
•
Publication
34155146 | J:307093
 
First Author: Amato CM
Year: 2021
Journal: Proc Natl Acad Sci U S A
Title: Developmental and sexual dimorphic atlas of the prenatal mouse external genitalia at the single-cell level.
Volume: 118
Issue: 25
•
•
•
•
•
Publication
25176648 | J:266003
First Author: Caballero IM
Year: 2014
Journal: Cell Rep
Title: Cell-autonomous repression of Shh by transcription factor Pax6 regulates diencephalic patterning by controlling the central diencephalic organizer.
Volume: 8
Issue: 5
Pages: 1405-18
•
•
•
•
•
Publication
23362349 | J:194050
First Author: Massa F
Year: 2013
Journal: Development
Title: Hepatocyte nuclear factor 1β controls nephron tubular development.
Volume: 140
Issue: 4
Pages: 886-96
•
•
•
•
•
Publication
20596014 | J:162637
First Author: Hang CT
Year: 2010
Journal: Nature
Title: Chromatin regulation by Brg1 underlies heart muscle development and disease.
Volume: 466
Issue: 7302
Pages: 62-7
•
•
•
•
•
Publication
28052057 | J:243618
First Author: McCracken KW
Year: 2017
Journal: Nature
Title: Wnt/β-catenin promotes gastric fundus specification in mice and humans.
Volume: 541
Issue: 7636
Pages: 182-187
•
•
•
•
•
Publication
11238910 | J:67359
First Author: Bruneau BG
Year: 2001
Journal: Mol Cell Biol
Title: Cardiomyopathy in Irx4-deficient mice is preceded by abnormal ventricular gene expression.
Volume: 21
Issue: 5
Pages: 1730-6
•
•
•
•
•
Publication
16870172 | J:112887
First Author: Mori AD
Year: 2006
Journal: Dev Biol
Title: Tbx5-dependent rheostatic control of cardiac gene expression and morphogenesis.
Volume: 297
Issue: 2
Pages: 566-86
•
•
•
•
•
Publication
28760814 | J:243561
First Author: Basta JM
Year: 2017
Journal: Development
Title: A Sall1-NuRD interaction regulates multipotent nephron progenitors and is required for loop of Henle formation.
Volume: 144
Issue: 17
Pages: 3080-3094
•
•
•
•
•
Publication
32439755 | J:290855
 
First Author: Yu W
Year: 2020
Journal: Development
Title: Pitx2-Sox2-Lef1 interactions specify progenitor oral/dental epithelial cell signaling centers.
Volume: 147
Issue: 11
•
•
•
•
•
Publication
26321200 | J:239780
First Author: Caputo L
Year: 2015
Journal: Cell Stem Cell
Title: The Isl1/Ldb1 Complex Orchestrates Genome-wide Chromatin Organization to Instruct Differentiation of Multipotent Cardiac Progenitors.
Volume: 17
Issue: 3
Pages: 287-99
•
•
•
•
•
Publication
37727504 | J:340740
 
First Author: Xu J
Year: 2023
Journal: Front Cell Dev Biol
Title: Smarca4 deficiency induces Pttg1 oncogene upregulation and hyperproliferation of tubular and interstitial cells during kidney development.
Volume: 11
Pages: 1233317
•
•
•
•
•
Publication
18094027 | J:130851
First Author: Lavado A
Year: 2008
Journal: Development
Title: Six3 inactivation causes progressive caudalization and aberrant patterning of the mammalian diencephalon.
Volume: 135
Issue: 3
Pages: 441-50
•
•
•
•
•
Publication
34095148 | J:308430
 
First Author: López-González L
Year: 2021
Journal: Front Cell Dev Biol
Title: Tangential Intrahypothalamic Migration of the Mouse Ventral Premamillary Nucleus and Fgf8 Signaling.
Volume: 9
Pages: 676121
•
•
•
•
•
Publication
22510988 | J:184004
First Author: Yu J
Year: 2012
Journal: Development
Title: Identification of molecular compartments and genetic circuitry in the developing mammalian kidney.
Volume: 139
Issue: 10
Pages: 1863-73
•
•
•
•
•
Publication
29459093 | J:309384
First Author: Neirijnck Y
Year: 2018
Journal: Kidney Int
Title: Sox11 gene disruption causes congenital anomalies of the kidney and urinary tract (CAKUT).
Volume: 93
Issue: 5
Pages: 1142-1153
•
•
•
•
•
Publication
26297811 | J:227021
First Author: Mallika C
Year: 2015
Journal: Dev Biol
Title: Gbx2 is essential for maintaining thalamic neuron identity and repressing habenular characters in the developing thalamus.
Volume: 407
Issue: 1
Pages: 26-39
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•
•
•
•
Publication
23362348 | J:194051
First Author: Heliot C
Year: 2013
Journal: Development
Title: HNF1B controls proximal-intermediate nephron segment identity in vertebrates by regulating Notch signalling components and Irx1/2.
Volume: 140
Issue: 4
Pages: 873-85
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•
•
•
Publication
28219675 | J:241012
First Author: Lee M
Year: 2017
Journal: Dev Biol
Title: Tcf7l2 plays crucial roles in forebrain development through regulation of thalamic and habenular neuron identity and connectivity.
Volume: 424
Issue: 1
Pages: 62-76
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•
Publication
30959515 | J:283357
First Author: Nowotschin S
Year: 2019
Journal: Nature
Title: The emergent landscape of the mouse gut endoderm at single-cell resolution.
Volume: 569
Issue: 7756
Pages: 361-367
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•
Publication
35315772 | J:322321
   
First Author: Catela C
Year: 2022
Journal: Elife
Title: Control of spinal motor neuron terminal differentiation through sustained Hoxc8 gene activity.
Volume: 11
•
•
•
•
•
Publication
- | J:322048
     
First Author: The Centre for Phenogenomics
Year: 2022
Journal: MGI Direct Data Submission
Title: Direct Data Submission for The Centre for Phenogenomics Alleles.
•
•
•
•
•
Publication
35831953 | J:327901
 
First Author: Ye Q
Year: 2022
Journal: Development
Title: Understanding the development of oral epithelial organs through single cell transcriptomic analysis.
Volume: 149
Issue: 16
•
•
•
•
•
Publication
37298722 | J:336866
 
First Author: Puelles L
Year: 2023
Journal: Int J Mol Sci
Title: The Midbrain Preisthmus: A Poorly Known Effect of the Isthmic Organizer.
Volume: 24
Issue: 11
•
•
•
•
•
Publication
39798644 | J:361454
 
First Author: Jasmine
Year: 2025
Journal: Dev Biol
Title: Epithelial and mesenchymal compartments of the developing bladder and urethra display spatially distinct gene expression patterns.
Volume: 520
Pages: 155-170
•
•
•
•
•
Publication
19741146 | J:152838
First Author: Fu H
Year: 2009
Journal: J Neurosci
Title: A genome-wide screen for spatially restricted expression patterns identifies transcription factors that regulate glial development.
Volume: 29
Issue: 36
Pages: 11399-408
•
•
•
•
•
Publication
19906978 | J:154739
First Author: Quina LA
Year: 2009
Journal: J Neurosci
Title: Brn3a and Nurr1 mediate a gene regulatory pathway for habenula development.
Volume: 29
Issue: 45
Pages: 14309-22
•
•
•
•
•
Publication
24146773 | J:209112
First Author: Shimizu H
Year: 2013
Journal: PLoS One
Title: The AERO system: a 3D-like approach for recording gene expression patterns in the whole mouse embryo.
Volume: 8
Issue: 10
Pages: e75754
•
•
•
•
•
Publication
20059953 | J:156017
First Author: Yokoyama S
Year: 2009
Journal: Dev Cell
Title: A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Volume: 17
Issue: 6
Pages: 836-48
•
•
•
•
•
Publication
- | J:84900
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Journal: Database Download
Title: Integrating Computational Gene Models into the Mouse Genome Informatics (MGI) Database
•
•
•
•
•
Publication
- | J:188991
     
First Author: The Jackson Laboratory
Year: 2012
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by The Jackson Laboratory
•
•
•
•
•
Publication
15618518 | J:91257
First Author: Gray PA
Year: 2004
Journal: Science
Title: Mouse brain organization revealed through direct genome-scale TF expression analysis.
Volume: 306
Issue: 5705
Pages: 2255-7
•
•
•
•
•
Publication
24952961 | J:215487
First Author: Thompson CL
Year: 2014
Journal: Neuron
Title: A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Volume: 83
Issue: 2
Pages: 309-323
•
•
•
•
•
Publication
24194600 | J:228563
First Author: Koscielny G
Year: 2014
Journal: Nucleic Acids Res
Title: The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Volume: 42
Issue: Database issue
Pages: D802-9
•
•
•
•
•
Publication
14681479 | J:122989
First Author: Visel A
Year: 2004
Journal: Nucleic Acids Res
Title: GenePaint.org: an atlas of gene expression patterns in the mouse embryo.
Volume: 32
Issue: Database issue
Pages: D552-6
•
•
•
•
•
Publication
- | J:204739
     
First Author: International Knockout Mouse Consortium
Year: 2014
Journal: Database Download
Title: MGI download of modified allele data from IKMC and creation of new knockout alleles
•
•
•
•
•
Publication
- | J:57656
     
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
•
•
•
•
•
Publication
- | J:136110
     
First Author: Velocigene
Year: 2008
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals)
•
•
•
•
•
Publication
- | J:171409
     
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
•
•
•
•
•
Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
•
•
•
•
•
Publication
- | J:155856
       
First Author: The Gene Ontology Consortium
Year: 2014
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs
•
•
•
•
•
Publication
16602821 | J:162220
First Author: Magdaleno S
Year: 2006
Journal: PLoS Biol
Title: BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Volume: 4
Issue: 4
Pages: e86
•
•
•
•
•
Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
•
•
•
•
•
Publication
38355793 | J:345621
First Author: Adams DJ
Year: 2024
Journal: Nature
Title: Genetic determinants of micronucleus formation in vivo.
Volume: 627
Issue: 8002
Pages: 130-136
•
•
•
•
•
Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
•
•
•
•
•
Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
•
•
•
•
•
Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
•
•
•
•
•
Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
•
•
•
•
•
Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
•
•
•
•
•
Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
•
•
•
•
•
Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
•
•
•
•
•
Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
•
•
•
•
•
Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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