|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 1 to 86 out of 86 for Ice1

0.166s

Categories

Hits by Pathway

Hits by Category

Hits by Strain

Type Details Score
Gene
23379 | ICE1
Type: gene
Organism: human
•
•
•
•
•
Gene
100498517 | ice1
Type: gene
Organism: frog, western clawed
•
•
•
•
•
Gene
306665 | Ice1
Type: gene
Organism: rat
•
•
•
•
•
Gene
488059 | ICE1
Type: gene
Organism: dog, domestic
•
•
•
•
•
Gene
471453 | ICE1
Type: gene
Organism: chimpanzee
•
•
•
•
•
Gene
782502 | ICE1
Type: gene
Organism: cattle
•
•
•
•
•
Gene
420795 | ICE1
Type: gene
Organism: chicken
•
•
•
•
•
Gene
327355 | ice1
Type: gene
Organism: zebrafish
•
•
•
•
•
Gene
710176 | ICE1
Type: gene
Organism: macaque, rhesus
•
•
•
•
•
Protein Coding Gene
MGI:2385865 | Ice1
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Gene
101929200 | ICE1-DT
Type: gene
Organism: human
•
•
•
•
•
Protein Coding Gene
MGP_CAROLIEiJ_G0018694 | -
Type: protein_coding_gene
Organism: Mus caroli
•
•
•
•
•
Protein Coding Gene
ENSMUSG00200010239 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
ENSMUSG00195026172 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
ENSMUSG00220034534 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
ENSMUSG00180022391 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
ENSMUSG00175008128 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGI_C57BL6J_2385865 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
ENSMUSG00215005576 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
ENSMUSG00210008289 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
ENSMUSG00185008648 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
ENSMUSG00205019280 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
ENSMUSG00230031411 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
ENSMUSG00190035849 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
ENSMUSG00225027983 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
ENSLUMG00010010620 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
ENSIUOG00005019237 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_PahariEiJ_G0015775 | -
Type: protein_coding_gene
Organism: Mus pahari
•
•
•
•
•
Protein Coding Gene
ENSMSPG00010030088 | -
Type: protein_coding_gene
Organism: Mus spretus
•
•
•
•
•
Publication
20064376 | J:157724
First Author: Shen X
Year: 2009
Journal: Cell
Title: Jumonji modulates polycomb activity and self-renewal versus differentiation of stem cells.
Volume: 139
Issue: 7
Pages: 1303-14
•
•
•
•
•
Publication
14621295 | J:86686
First Author: Okazaki N
Year: 2003
Journal: DNA Res
Title: Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.
Volume: 10
Issue: 4
Pages: 167-80
•
•
•
•
•
Publication
12477932 | J:82808
First Author: Strausberg RL
Year: 2002
Journal: Proc Natl Acad Sci U S A
Title: Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
Volume: 99
Issue: 26
Pages: 16899-903
•
•
•
•
•
Publication
- | J:84900
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Journal: Database Download
Title: Integrating Computational Gene Models into the Mouse Genome Informatics (MGI) Database
•
•
•
•
•
Publication
10725249 | J:60984
First Author: Ko MS
Year: 2000
Journal: Development
Title: Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development.
Volume: 127
Issue: 8
Pages: 1737-49
•
•
•
•
•
Publication
12520002 | J:91812
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
•
•
•
•
•
Publication
- | J:265051
     
First Author: MGI and IMPC
Year: 2018
Journal: Database Release
Title: MGI Load of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC)
•
•
•
•
•
Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
•
•
•
•
•
Publication
- | J:78475
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database
•
•
•
•
•
Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
•
•
•
•
•
Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
•
•
•
•
•
Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
•
•
•
•
•
Publication
- | J:326541
       
First Author: Cyagen Biosciences Inc.
Year: 2022
Title: Cyagen Biosciences Website.
•
•
•
•
•
Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
•
•
•
•
•
Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
•
•
•
•
•
Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
•
•
•
•
•
Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
•
•
•
•
•
Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
•
•
•
•
•
Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
•
•
•
•
•
Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
•
•
•
•
•
Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
•
•
•
•
•
Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
•
•
•
•
•
Publication
- | J:342604
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
•
•
•
•
•
Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
•
•
•
•
•
Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
•
•
•
•
•
Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
•
•
•
•
•
Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
•
•
•
•
•
Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
•
•
•
•
•
Publication
- | J:389486
     
First Author: Mouse Genome Informatics and Ensembl Genome Database Project
Year: 2026
Journal: Database Release
Title: MGI Strain Genome Feature and Gene Model Load from Ensembl.
•
•
•
•
•
Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
•
•
•
•
•
Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
•
•
•
•
•
Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
•
•
•
•
•
Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
•
•
•
•
•
Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
•
•
•
•
•
Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
•
•
•
•
•
Publication
37025149 | J:343399
 
First Author: Ma T
Year: 2023
Journal: Front Plant Sci
Title: Arabidopsis LFR, a SWI/SNF complex component, interacts with ICE1 and activates ICE1 and CBF3 expression in cold acclimation.
Volume: 14
Pages: 1097158
•
•
•
•
•
Protein Domain
IPR063802 | Ice1_insects_C
Type: Domain
Description: This entry represents the C-terminal domain of little elongation complex subunit 1 (Ice1) found in insects. The full-length Ice1 protein is a component of the little elongation complex (LEC), which is required to regulate small nuclear RNA gene transcription by RNA polymerase II and III [, ]. Ice1 acts as a scaffold protein that promotes LEC complex formation and recruitment and RNA polymerase II occupancy at snRNA genes in subnuclear bodies. The complete protein is located in the nucleus and belongs to the ICE1 family. The specific function of this domain remains to be determined. This domain contains a TPR-like fold.
•
•
•
•
•
Protein Domain
IPR062800 | Ice1_TPR_1st
Type: Domain
Description: This entry represents the first TPR-like domain of little elongation complex subunit 1 (Ice1). The specific function of this domain remains to be determined.The full-length Ice1 protein is a component of the little elongation complex (LEC), which is required to regulate small nuclear RNA gene transcription by RNA polymerase II and III [, ]. Ice1 acts as a scaffold protein that promotes LEC complex formation and recruitment and RNA polymerase II occupancy at snRNA genes in subnuclear bodies. The complete protein is located in the nucleus and belongs to the ICE1 family.
•
•
•
•
•
Publication
22195968 | J:212787
First Author: Smith ER
Year: 2011
Journal: Mol Cell
Title: The little elongation complex regulates small nuclear RNA transcription.
Volume: 44
Issue: 6
Pages: 954-65
•
•
•
•
•
Publication
23932780 | -
First Author: Hu D
Year: 2013
Journal: Mol Cell
Title: The little elongation complex functions at initiation and elongation phases of snRNA gene transcription.
Volume: 51
Issue: 4
Pages: 493-505
•
•
•
•
•
Protein
E9Q286
Organism: Mus musculus/domesticus
Length: 2241  
Fragment?: false
•
•
•
•
•
Protein
A0A1Y7VIN0
Organism: Mus musculus/domesticus
Length: 117  
Fragment?: true
•
•
•
•
•
Protein
A0A1Y7VKA7
Organism: Mus musculus/domesticus
Length: 107  
Fragment?: true
•
•
•
•
•
Protein
Q8VEG5
Organism: Mus musculus/domesticus
Length: 242  
Fragment?: false
•
•
•
•
•
Protein Domain
IPR057881 | ICE1_C
Type: Domain
Description: This domain is found at the C-terminal end of ICE1 mainly in animals. This domain is predicted to adopt an all-�� configuration.Little elongation complex subunit 1 (ICE1) acts as a scaffold protein that promotes the LEC complex formation and recruitment and RNA polymerase II occupancy at small nuclear RNA (snRNA) genes in subnuclear bodies.
•
•
•
•
•
Publication
16702557 | -
First Author: Dong CH
Year: 2006
Journal: Proc Natl Acad Sci U S A
Title: The negative regulator of plant cold responses, HOS1, is a RING E3 ligase that mediates the ubiquitination and degradation of ICE1.
Volume: 103
Issue: 21
Pages: 8281-6
•
•
•
•
•
Publication
22960247 | -
First Author: Lee JH
Year: 2012
Journal: Plant Cell Physiol
Title: The E3 ubiquitin ligase HOS1 regulates low ambient temperature-responsive flowering in Arabidopsis thaliana.
Volume: 53
Issue: 10
Pages: 1802-14
•
•
•
•
•
Publication
31826964 | -
First Author: Cheng Z
Year: 2020
Journal: Plant Cell
Title: Nup96 and HOS1 Are Mutually Stabilized and Gate CONSTANS Protein Level, Conferring Long-Day Photoperiodic Flowering Regulation in Arabidopsis.
Volume: 32
Issue: 2
Pages: 374-391
•
•
•
•
•
Publication
33419060 | -
 
First Author: Shkryl Y
Year: 2021
Journal: Plants (Basel)
Title: CRISPR/Cas9-Mediated Knockout of HOS1 Reveals Its Role in the Regulation of Secondary Metabolism in Arabidopsis thaliana.
Volume: 10
Issue: 1
•
•
•
•
•
Protein Domain
IPR044718 | HOS1
Type: Family
Description: HOS1 is an E3 ubiquitin-protein ligase that acts as a common regulator in the signalling pathways that control flowering time [, ]. It mediates ubiquitination and subsequent proteasomal degradation of the transcription factor ICE1 under cold treatment []. In Arabidopsis, CONSTANS (CO) activates transcription of the floral integrators, FLOWERING LOCUS T (FT) and TWIN SISTER OF FT (TSF) genes, which in turn govern the flowering time []. Together with Nup96, HOS1 regulates CO protein turnover and thereby prevents precocious flowering in long-day conditions [].
•
•
•
•
•
Publication
12535353 | -
First Author: Sorensen AM
Year: 2003
Journal: Plant J
Title: The Arabidopsis ABORTED MICROSPORES (AMS) gene encodes a MYC class transcription factor.
Volume: 33
Issue: 2
Pages: 413-23
•
•
•
•
•
Publication
18641265 | -
First Author: Kanaoka MM
Year: 2008
Journal: Plant Cell
Title: SCREAM/ICE1 and SCREAM2 specify three cell-state transitional steps leading to arabidopsis stomatal differentiation.
Volume: 20
Issue: 7
Pages: 1775-85
•
•
•
•
•
Publication
15539473 | -
First Author: Colangelo EP
Year: 2004
Journal: Plant Cell
Title: The essential basic helix-loop-helix protein FIT1 is required for the iron deficiency response.
Volume: 16
Issue: 12
Pages: 3400-12
•
•
•
•
•
Publication
28507175 | -
First Author: de Marcos A
Year: 2017
Journal: Plant Physiol
Title: A Mutation in the bHLH Domain of the SPCH Transcription Factor Uncovers a BR-Dependent Mechanism for Stomatal Development.
Volume: 174
Issue: 2
Pages: 823-842
•
•
•
•
•
Publication
22456953 | -
First Author: Miyamoto K
Year: 2013
Journal: Protoplasma
Title: Stress-induced expression of the transcription factor RERJ1 is tightly regulated in response to jasmonic acid accumulation in rice.
Volume: 250
Issue: 1
Pages: 241-9
•
•
•
•
•
Publication
33128314 | -
First Author: He Q
Year: 2021
Journal: Plant J
Title: OsbHLH6 interacts with OsSPX4 and regulates the phosphate starvation response in rice.
Volume: 105
Issue: 3
Pages: 649-667
•
•
•
•
•
Protein Domain
IPR051358 | TF_AMS/ICE1/BHLH6-like
Type: Family
Description: This entry includes bHLH transcription factors from plants that play diverse roles in plant development and responses. ICE1 is involved in regulating cold-induced transcription of CBF/DREB1 genes, and stomatal differentiation [, ]. Transcription factor FIT is involved in iron acquisition []while AMS (ABORTED MICROSPORES) plays a crucial role in tapetum development and it is required for male fertility and pollen differentiation, especially during the post-meiotic transcriptional regulation of microspore development within the developing anther []. Transcription factor BHLB6 is involved in phosphate starvation response []and acts as a positive regulator of phosphate homeostasis and phosphate signalling by antagonising SPX4. It also playa a role as transcriptional activator in the regulation of jasmonate-mediated stress-inducible gene expression[]. The family is characterised by the ability to bind specific DNA sequences, often containing E-box motifs, and to function as dimers, which is crucial for their regulatory roles.
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom