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Publication : Genealogy of the 129 inbred strains: 129/SvJ is a contaminated inbred strain.

First Author  Threadgill DW Year  1997
Journal  Mamm Genome Volume  8
Issue  6 Pages  390-3
PubMed ID  9166580 Mgi Jnum  J:40661
Mgi Id  MGI:708022 Doi  10.1007/s003359900453
Citation  Threadgill DW, et al. (1997) Genealogy of the 129 inbred strains: 129/SvJ is a contaminated inbred strain. Mamm Genome 8(6):390-3
abstractText  The 129 mouse is the most widely used strain in gene targeting experiments. However, numerous substrains exist with demonstrable physiological differences. In this study a set of simple sequence length polymorphisms (SSLPs) was used to determine the relatedness of selected 129 substrains. 129/SvJ was significantly different from the other 129 substrains and is more accurately classified as a recombinant congenic strain (129cX/Sv), being derived from 129/Sv and an unknown strain. This mixed genetic background could complicate gene targeting experiments by reducing homologous recombination efficiency when constructs and ES cells are not derived from the same 129 substrain. Additionally, discrepancies due to different genetic backgrounds may arise when comparing phenotypes of genes targeted in different 129-derived ES cell lines.
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