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Publication : Dynamic changes in chromatin conformation at the TNF transcription start site in T helper lymphocyte subsets.

First Author  Shebzukhov YV Year  2014
Journal  Eur J Immunol Volume  44
Issue  1 Pages  251-64
PubMed ID  24009130 Mgi Jnum  J:208215
Mgi Id  MGI:5562491 Doi  10.1002/eji.201243297
Citation  Shebzukhov YV, et al. (2014) Dynamic changes in chromatin conformation at the TNF transcription start site in T helper lymphocyte subsets. Eur J Immunol 44(1):251-64
abstractText  Tumor necrosis factor (TNF) is one of the key primary response genes in the immune system that can be activated by a variety of stimuli. Previous analysis of chromatin accessibility to DNaseI demonstrated open chromatin conformation of the TNF proximal promoter in T cells. Here, using chromatin probing with restriction enzyme EcoNI and micrococcal nuclease we show that in contrast to the proximal promoter, the TNF transcription start site remains in a closed chromatin configuration in primary T helper (Th) cells, but acquires an open state after activation or polarization under Th1 and Th17 conditions. We further demonstrate that transcription factor c-Jun plays a pivotal role in the maintenance of open chromatin conformation at the transcription start site of the TNF gene.
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