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Publication : A typology of photoreceptor gene expression patterns in the mouse.

First Author  Corbo JC Year  2007
Journal  Proc Natl Acad Sci U S A Volume  104
Issue  29 Pages  12069-74
PubMed ID  17620597 Mgi Jnum  J:123149
Mgi Id  MGI:3717288 Doi  10.1073/pnas.0705465104
Citation  Corbo JC, et al. (2007) A typology of photoreceptor gene expression patterns in the mouse. Proc Natl Acad Sci U S A 104(29):12069-74
abstractText  Mutations in photoreceptor-enriched genes have been implicated in dozens of human retinal diseases, yet no systematic analysis of rod and cone gene expression patterns has been carried out. In addition, although cone photoreceptor loss accounts for much of the morbidity of retinal disease, relatively few cone-specific genes are known. In this study, we carried out microarray and in situ hybridization analyses of the mouse Neural retina leucine zipper gene (Nrl) mutant, which shows an en masse conversion of rods into cones, to establish a typology of photoreceptor gene expression and to identify novel cone-specific genes. We found a total of 18 new cone-enriched genes, some of which map near uncloned retinal disease loci. Several of these genes have a dorsal-ventral (D-V) pattern of expression similar to that of short- or medium-wavelength opsins. We carried out microarray analysis of dorsal and ventral microdissected WT retina and found additional photoreceptor genes with an asymmetric distribution. Overall, we found that photoreceptor genes fall on an expression spectrum from rod-specific to cone-specific, with many showing varying degrees of rod and cone coexpression. These expression patterns can be reliably predicted from microarray data alone. Our results demonstrate definitive molecular differences between rods and cones that may underlie the physiological differences between these two classes of photoreceptors.
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