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Publication : Obtaining and loading genome assembly coordinates from NCBI annotations

First Author  Mouse Genome Informatics Scientific Curators Year  2005
Mgi Jnum  J:90438 Mgi Id  MGI:3043865
Citation  Mouse Genome Informatics Scientific Curators (2005) Obtaining and loading genome assembly coordinates from NCBI annotations.
abstractText  We represent genes in MGI as sequence objects that contain the genomic sequence between the start and end coordinate (without intron/exon boundaries). Annotated genome features from NCBI are downloaded and the file seq_gene.md is modified to include only sequence coordinates for C57BL/6J, features with UN or random chromosome assignment are excluded. All of the coordinates are listed from lowest to highest, the coordinate data will be dumped and reloaded with every new assembly of the mouse genome.
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