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Publication : Structural basis for specific flagellin recognition by the NLR protein NAIP5.

First Author  Yang X Year  2018
Journal  Cell Res Volume  28
Issue  1 Pages  35-47
PubMed ID  29182158 Mgi Jnum  J:257333
Mgi Id  MGI:6120354 Doi  10.1038/cr.2017.148
Citation  Yang X, et al. (2018) Structural basis for specific flagellin recognition by the NLR protein NAIP5. Cell Res 28(1):35-47
abstractText  The nucleotide-binding domain- and leucine-rich repeat (LRR)-containing proteins (NLRs) function as intracellular immune receptors to detect the presence of pathogen- or host-derived signals. The mechanisms of how NLRs sense their ligands remain elusive. Here we report the structure of a bacterial flagellin derivative in complex with the NLR proteins NAIP5 and NLRC4 determined by cryo-electron microscopy at 4.28 A resolution. The structure revealed that the flagellin derivative forms two parallel helices interacting with multiple domains including BIR1 and LRR of NAIP5. Binding to NAIP5 results in a nearly complete burial of the flagellin derivative, thus stabilizing the active conformation of NAIP5. The extreme C-terminal side of the flagellin is anchored to a sterically constrained binding pocket of NAIP5, which likely acts as a structural determinant for discrimination of different bacterial flagellins by NAIP5, a notion further supported by biochemical data. Taken together, our results shed light on the molecular mechanisms underlying NLR ligand perception.
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