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Protein Coding Gene : Col5a2 collagen, type V, alpha 2

Primary Identifier  MGI:88458 Organism  mouse, laboratory
Chromosome  1 NCBI Gene Number  12832
Mgi Type  protein coding gene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 7.0.0)

Enables SMAD binding activity. Involved in collagen fibril organization and skin development. Acts upstream of or within cellular response to amino acid stimulus and skeletal system development. Located in collagen-containing extracellular matrix and extracellular space. Part of collagen trimer. Is expressed in several structures, including connective tissue; embryo mesenchyme; genitourinary system; intraembryonic coelom; and musculoskeletal system. Used to study Ehlers-Danlos syndrome classic type 1. Human ortholog(s) of this gene implicated in Ehlers-Danlos syndrome and Ehlers-Danlos syndrome classic type 2. Orthologous to human COL5A2 (collagen type V alpha 2 chain).
PHENOTYPE: Homozygous mutation of this gene results in perinatal lethality. Mutant animals exhibit reduced body weight, reduced bone growth rate, thin, fragile skin, variable degrees of lordosis and kyphosis, abnormal localization of hair follicles in the dermis, and thinned stroma of the cornea. [provided by MGI curators]
  • synonyms:
  • MGI:1920990,
  • 1110014L14Rik,
  • RIKEN cDNA 1110014L14 gene,
  • Col5a2,
  • MGD-MRK-2072,
  • collagen, type V, alpha 2

Features --> Cross References

Genome

Sequence Feature Displayer

JG Browse Displayer

0 Canonical

0 CDSs

0 Exons

0 Genomic Clusters

1 Involved In Mutations

0 Strain

0 Transcripts

0 Transgenic Expressors

0 UTRs

Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

Proteins

Gene --> Proteins

Function

Mouse features --> Functions (GO terms)

Homology

Genes --> Homologs

Interactions

21 Pathways

0 Targeted By

Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

Phenotype

Genes/Features --> Phenotypes (MP terms)

Disease

Mouse features --> Human diseases

Literature

Mouse features --> Publications

 

Other

0 Driver For