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Polymorphic Pseudogene : Pla2g2a phospholipase A2, group IIA (platelets, synovial fluid)

Primary Identifier  MGI:104642 Organism  mouse, laboratory
Chromosome  4 Mgi Type  polymorphic pseudogene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 8.0.0)

Predicted to enable calcium ion binding activity; calcium-dependent phospholipase A2 activity; and phospholipid binding activity. Involved in defense response to Gram-positive bacterium; intestinal stem cell homeostasis; and prostaglandin biosynthetic process. Acts upstream of or within negative regulation of epithelial cell proliferation; regulation of endothelial cell proliferation; and somatic stem cell population maintenance. Located in mitochondrion. Is expressed in ileum; jejunum; and primary palate. Human ortholog(s) of this gene implicated in cholecystolithiasis; colorectal cancer; gastroesophageal reflux disease; and human immunodeficiency virus infectious disease. Orthologous to human PLA2G2A (phospholipase A2 group IIA).
PHENOTYPE: Mutations in this gene influence susceptibility to intestinal adenomas. [provided by MGI curators]
specificity  From J:28799 The mouse strains C57BL/6, 129/Sv, and B10.RIII were found to be homozygous for the defective sPLA2 gene, whereas outbred CD-1:SW mice had variable genotype at this locus. BALB/c, C3H/HE, DBA/1, DBA/2, NZB/BIN, and MRL lpr/lpr mice had a normal sPLA2 genotype.
  • synonyms:
  • MGD-MRK-26080,
  • MGD-MRK-12352,
  • EF,
  • modifier of Min1,
  • MGI:97049,
  • phospholipase A2, group IIA (platelets, synovial fluid),
  • Pla2g2a,
  • Mom1,
  • Enhancing factor

Features --> Cross References

Genome

Sequence Feature Displayer

JG Browse Displayer

0 Canonical

0 CDSs

0 Exons

0 Genomic Clusters

3 Involved In Mutations

0 Strain

0 Transcripts

1 Transgenic Expressors

Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

Proteins

Gene --> Proteins

Function

Mouse features --> Functions (GO terms)

Homology

Genes --> Homologs

Interactions

Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

Phenotype

Genes/Features --> Phenotypes (MP terms)

Disease

Mouse features --> Human diseases

Literature

Mouse features --> Publications

 

Other

0 Driver For