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Protein Coding Gene : Tardbp TAR DNA binding protein

Primary Identifier  MGI:2387629 Organism  mouse, laboratory
Chromosome  4 NCBI Gene Number  230908
Mgi Type  protein coding gene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 8.0.0)

Enables RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and pre-mRNA intronic binding activity. Involved in positive regulation of protein import into nucleus; regulation of circadian rhythm; and regulation of protein stability. Acts upstream of or within RNA splicing. Located in nucleus. Is expressed in several structures, including branchial arch; central nervous system; early conceptus; genitourinary system; and heart. Used to study Grn-related frontotemporal lobar degeneration with Tdp43 inclusions; amyotrophic lateral sclerosis type 10; and frontotemporal dementia. Human ortholog(s) of this gene implicated in Parkinson's disease; amyotrophic lateral sclerosis; amyotrophic lateral sclerosis type 10; and motor neuron disease. Orthologous to human TARDBP (TAR DNA binding protein).
PHENOTYPE: Homozygous deficient mice display embryonic lethality before somite formation with impaired inner cell mass proliferation. Substitutions in RRM2 or low-complexity (LCD) domains affect mRNA splicing. Homozygosity for these mutations is embryonic lethal on B6 strain backgrounds. The LCD mutation leads to an adult-onset neuromuscular phenotype accompanied by motor neuron loss and neurodegenerative changes on B6-D2 background. Heterozygosity for p.N267S mutation affects neural stem cells and leads to neurological defects. [provided by MGI curators]
  • synonyms:
  • 1190002A23Rik,
  • RIKEN cDNA 1190002A23 gene,
  • C85084,
  • MGI:1916123,
  • Tardbp,
  • TDP-43,
  • MGI:2140695,
  • TAR DNA binding protein,
  • Tdp43,
  • expressed sequence C85084

Features --> Cross References

Genome

Sequence Feature Displayer

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0 Canonical

0 CDSs

0 Exons

0 Genomic Clusters

3 Involved In Mutations

0 Strain

0 Transcripts

2 Transgenic Expressors

0 UTRs

Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

Proteins

Gene --> Proteins

Function

Mouse features --> Functions (GO terms)

Homology

Genes --> Homologs

Interactions

0 Pathways

0 Targeted By

Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

Phenotype

Genes/Features --> Phenotypes (MP terms)

Disease

Mouse features --> Human diseases

Literature

Mouse features --> Publications

 

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0 Driver For