|  Help  |  About  |  Contact Us

Polymorphic Pseudogene : Cxcl11 chemokine (C-X-C motif) ligand 11

Primary Identifier  MGI:1860203 Organism  mouse, laboratory
Chromosome  5 Mgi Type  polymorphic pseudogene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 8.0.0)

Predicted to enable CXCR3 chemokine receptor binding activity; chemokine activity; and heparin binding activity. Predicted to be involved in several processes, including G protein-coupled receptor signaling pathway; T cell chemotaxis; and positive regulation of release of sequestered calcium ion into cytosol. Predicted to be located in extracellular space. Is expressed in head; nasal cavity epithelium; palatal shelf epithelium; palatal shelf mesenchyme; and testis. Orthologous to human CXCL11 (C-X-C motif chemokine ligand 11).
PHENOTYPE: Mice with null or restored expression show similar adaptive immune responses to viral infection. [provided by MGI curators]
specificity  BALB/c mice produce a functional protein from the Cxcl11 locus, but a single nucleotide deletion in the C57BL/6J genome introduces a frameshift resulting in early translation termination and renders the allele null.
  • synonyms:
  • betaR1,
  • Scyb11,
  • b-R1,
  • Cxcl11,
  • H174,
  • IP9,
  • small inducible cytokine subfamily B (Cys-X-Cys), member 11,
  • I-TAC,
  • chemokine (C-X-C motif) ligand 11,
  • SCYB9B,
  • ITAC

Features --> Cross References

Genome

Sequence Feature Displayer

JG Browse Displayer

0 Canonical

0 CDSs

0 Exons

0 Genomic Clusters

3 Involved In Mutations

0 Strain

0 Transcripts

0 Transgenic Expressors

Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

Proteins

Gene --> Proteins

Function

Mouse features --> Functions (GO terms)

Homology

Genes --> Homologs

Interactions

Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

Phenotype

Genes/Features --> Phenotypes (MP terms)

Disease

Mouse features --> Human diseases

Literature

Mouse features --> Publications

 

Other

1 Driver For