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Publication : Identification and analysis of novel genes expressed in the mouse embryonic facial primordia.

First Author  Bennetts JS Year  2006
Journal  Front Biosci Volume  11
Pages  2631-46 PubMed ID  16720340
Mgi Jnum  J:383028 Mgi Id  MGI:8321975
Doi  10.2741/1997 Citation  Bennetts JS, et al. (2006) Identification and analysis of novel genes expressed in the mouse embryonic facial primordia. Front Biosci 11:2631-46
abstractText  Craniofacial anomalies are a common feature of human congenital dysmorphology syndromes, suggesting that genes expressed in the developing face are likely to play a wider role in embryonic development. To facilitate the identification of genes involved in embryogenesis, we previously constructed an enriched cDNA library by subtracting adult mouse liver cDNA from that of embryonic day (E)10.5 mouse pharyngeal arch cDNA. From this library, 273 unique clones were sequenced and known proteins binned into functional categories in order to assess enrichment of the library (1). We have now selected 31 novel and poorly characterised genes from this library and present bioinformatic analysis to predict proteins encoded by these genes, and to detect evolutionary conservation. Of these genes 61% (19/31) showed restricted expression in the developing embryo, and a subset of these was chosen for further in silico characterisation as well as experimental determination of subcellular localisation based on transient transfection of predicted full-length coding sequences into mammalian cell lines. Where a human orthologue of these genes was detected, chromosomal localisation was determined relative to known loci for human congenital disease.
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