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Protein Domain : Orange domain

Primary Identifier  IPR003650 Type  Domain
Short Name  Orange_dom
description  The Orange domain is a motif of ~35 amino acids present in eukaryoticDNA-binding transcription repressors, which regulate cell differentiation,embryonic patterning and other biological processes in both vertebrates andinvertebrates. The Orange domain is located just C-terminal to a basichelix-loop-helix (bHLH) domain in the bHLH-Orange (bHLH-O) proteins. Thisfamily of bHLH repressors is related to the Drosophila hairy andEnhancer-of-split proteins, wherein the Orange domain was first described andalso named helix III/IV region [, ]. The transcription of many vertebrate bHLH-O genes is regulated by the Notch signaling pathway, which controls fate decisions and other developmental processes. Orange domain proteins function as transcription repressors involved in the regulation of differentiation, anteroposterior segmentation and sex determination in flies [].Four subfamilies of bHLH-Orange proteins have been identified, i.e. hairy,Enhancer of split, Hey (also named HRT or Hesr) and Stra13 (also named SHARP,DEC, CLAST or BHLHB2) [, ]. All these Orange domain proteins have the bHLH domain and except for the Stra13 subfamily, the othersubfamily members have a conserved tetrapeptide motif in the C-terminalextremity. The C-terminal motif of the hairy and Enhancer of split proteins isWRPW and this binds the transcriptional corepressor groucho/TLE. For the Heysubfamily members the C-terminal motif is YXXW. The Orange domain may conferspecificity of function to different family members and/or it may be involvedin dimerization [, ].

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64 Protein Domain Regions